RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C MLC2Q06580 163 aa2.38□□□□□ -2.03
RTT101YJL047C HDA2Q06629 674 aa2.38□□□□□ -2.03
RTT101YJL047C MED1Q12321 566 aa2.38□□□□□ -2.03
RTT101YJL047C PTH2P34222 208 aa2.37□□□□□ -2.03
RTT101YJL047C PAN5P38787 379 aa2.37□□□□□ -2.03
RTT101YJL047C APE4P38821 490 aa2.37□□□□□ -2.03
RTT101YJL047C SAP185P40856 1058 aa2.37□□□□□ -2.03
RTT101YJL047C YJR096WP47137 282 aa2.37□□□□□ -2.03
RTT101YJL047C SRB7P47822 140 aa2.37□□□□□ -2.03
RTT101YJL047C NPY1P53164 384 aa2.37□□□□□ -2.03
RTT101YJL047C HOL1P53389 586 aa2.37□□□□□ -2.03
RTT101YJL047C YNL165WP53891 406 aa2.37□□□□□ -2.03
RTT101YJL047C HFD1Q04458 532 aa2.37□□□□□ -2.03
RTT101YJL047C YPL066WQ12194 479 aa2.37□□□□□ -2.03
RTT101YJL047C TY1B-AO13527 1196 aaKnown RBP2.37□□□□□ -2.03
RTT101YJL047C NAB2P32505 525 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
RTT101YJL047C SCD5P34758 872 aa2.37□□□□□ -2.03
RTT101YJL047C MEP1P40260 492 aa2.37□□□□□ -2.03
RTT101YJL047C QDR2P40474 542 aa2.37□□□□□ -2.03
RTT101YJL047C HIS6P40545 261 aa2.37□□□□□ -2.03
RTT101YJL047C NIT2P47016 307 aa2.37□□□□□ -2.03
RTT101YJL047C NUT1P53114 1132 aa2.37□□□□□ -2.03
RTT101YJL047C MET13P53128 600 aa2.37□□□□□ -2.03
RTT101YJL047C MEP3P53390 489 aa2.37□□□□□ -2.03
RTT101YJL047C SNP1Q00916 300 aaPredicted RBP2.37□□□□□ -2.03
RTT101YJL047C BUL2Q03758 920 aaKnown RBP2.37□□□□□ -2.03
RTT101YJL047C PSR2Q07949 397 aa2.37□□□□□ -2.03
RTT101YJL047C NEW1Q08972 1196 aaKnown RBP2.37□□□□□ -2.03
RTT101YJL047C CMR1Q12510 522 aaKnown RBP2.37□□□□□ -2.03
RTT101YJL047C CDC9P04819 755 aa2.36□□□□□ -2.03
RTT101YJL047C LDH1P38139 375 aa2.36□□□□□ -2.03
RTT101YJL047C YBR284WP38150 797 aa2.36□□□□□ -2.03
RTT101YJL047C BSD2P38356 321 aa2.36□□□□□ -2.03
RTT101YJL047C RIM4P38741 713 aa2.36□□□□□ -2.03
RTT101YJL047C UTP7P40055 554 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C DOT6P40059 670 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C RRN7P40992 514 aa2.36□□□□□ -2.03
RTT101YJL047C VTC2P43585 828 aa2.36□□□□□ -2.03
RTT101YJL047C YGL140CP53120 1219 aa2.36□□□□□ -2.03
RTT101YJL047C PBP1P53297 722 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C GTR1Q00582 310 aa2.36□□□□□ -2.03
RTT101YJL047C YPL062WQ02781 134 aa2.36□□□□□ -2.03
RTT101YJL047C VPS30Q02948 557 aa2.36□□□□□ -2.03
RTT101YJL047C ISU1Q03020 165 aa2.36□□□□□ -2.03
RTT101YJL047C TOM70P07213 617 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C MOD5P07884 428 aa2.36□□□□□ -2.03
RTT101YJL047C MSS18P08593 268 aa2.36□□□□□ -2.03
RTT101YJL047C RAD18P10862 487 aa2.36□□□□□ -2.03
RTT101YJL047C MCM1P11746 286 aa2.36□□□□□ -2.03
RTT101YJL047C INO1P11986 533 aa2.36□□□□□ -2.03
RTT101YJL047C NAT1P12945 854 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C DAT1P13483 248 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C SEC23P15303 768 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C CHS3P29465 1165 aa2.36□□□□□ -2.03
RTT101YJL047C TPD3P31383 635 aa2.36□□□□□ -2.03
RTT101YJL047C BEM3P32873 1128 aa2.36□□□□□ -2.03
RTT101YJL047C PEX28P38848 579 aa2.36□□□□□ -2.03
RTT101YJL047C PTC2P39966 464 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C CTF4Q01454 927 aa2.36□□□□□ -2.03
RTT101YJL047C ROD1Q02805 837 aa2.36□□□□□ -2.03
RTT101YJL047C LCB5Q06147 687 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C TSR2Q06672 205 aaKnown RBP2.36□□□□□ -2.03
RTT101YJL047C CYB2P00175 591 aa2.35□□□□□ -2.03
RTT101YJL047C SRD1P09007 221 aa2.35□□□□□ -2.03
RTT101YJL047C PRP9P19736 530 aaKnown RBP2.35□□□□□ -2.03
RTT101YJL047C PCL2P25693 308 aa2.35□□□□□ -2.03
RTT101YJL047C IMP2'P32351 346 aa2.35□□□□□ -2.03
RTT101YJL047C PRP19P32523 503 aaKnown RBP2.35□□□□□ -2.03
RTT101YJL047C NUP120P35729 1037 aa2.35□□□□□ -2.03
RTT101YJL047C VPS8P39702 1274 aa2.35□□□□□ -2.03
RTT101YJL047C OAF1P39720 1047 aaPredicted RBP2.35□□□□□ -2.03
RTT101YJL047C ACA1P39970 489 aa2.35□□□□□ -2.03
RTT101YJL047C SUM1P46676 1062 aa2.35□□□□□ -2.03
RTT101YJL047C RSM26P47141 266 aa2.35□□□□□ -2.03
RTT101YJL047C YGR016WP53209 190 aa2.35□□□□□ -2.03
RTT101YJL047C TRS130Q03660 1102 aa2.35□□□□□ -2.03
RTT101YJL047C MSH6Q03834 1242 aa2.35□□□□□ -2.03
RTT101YJL047C CIA1Q05583 330 aa2.35□□□□□ -2.03
RTT101YJL047C PHM6Q05637 104 aa2.35□□□□□ -2.03
RTT101YJL047C SDH5Q08230 162 aa2.35□□□□□ -2.03
RTT101YJL047C WTM2Q12206 467 aa2.35□□□□□ -2.03
RTT101YJL047C MSD1P15179 658 aaKnown RBP2.35□□□□□ -2.03
RTT101YJL047C AEP2P22136 580 aa2.35□□□□□ -2.03
RTT101YJL047C RAD53P22216 821 aa2.35□□□□□ -2.03
RTT101YJL047C PPH3P32345 308 aa2.35□□□□□ -2.03
RTT101YJL047C STO1P34160 861 aaKnown RBP2.35□□□□□ -2.03
RTT101YJL047C SQT1P35184 431 aa2.35□□□□□ -2.03
RTT101YJL047C YKL133CP36066 463 aa2.35□□□□□ -2.03
RTT101YJL047C TBS1P38114 1094 aa2.35□□□□□ -2.03
RTT101YJL047C DYS1P38791 387 aa2.35□□□□□ -2.03
RTT101YJL047C UBP6P43593 499 aaKnown RBP2.35□□□□□ -2.03
RTT101YJL047C DUG1P43616 481 aaKnown RBP2.35□□□□□ -2.03
RTT101YJL047C GPI8P49018 411 aa2.35□□□□□ -2.03
RTT101YJL047C SIW14P53965 281 aa2.35□□□□□ -2.03
RTT101YJL047C YLR352WQ06479 807 aa2.35□□□□□ -2.03
RTT101YJL047C NBA1Q08229 501 aaKnown RBP2.35□□□□□ -2.03
RTT101YJL047C Q0182Q9ZZW1 134 aa2.35□□□□□ -2.03
RTT101YJL047C TPM1P17536 199 aaKnown RBP2.34□□□□□ -2.03
RTT101YJL047C SFL1P20134 766 aa2.34□□□□□ -2.03
RTT101YJL047C SAN1P22470 610 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms