RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C RFT1P38206 574 aaPredicted RBP10.93□□□□□ -0.66
MET28YIR017C VPS29P38759 282 aa10.93□□□□□ -0.66
MET28YIR017C MXR1P40029 184 aa10.93□□□□□ -0.66
MET28YIR017C ATG32P40458 529 aa10.93□□□□□ -0.66
MET28YIR017C ORC4P54791 529 aa10.93□□□□□ -0.66
MET28YIR017C PTA1Q01329 785 aaPredicted RBP10.93□□□□□ -0.66
MET28YIR017C MMR1Q06324 491 aa10.93□□□□□ -0.66
MET28YIR017C MET7Q08645 548 aa10.93□□□□□ -0.66
MET28YIR017C PTC5Q12511 572 aa10.93□□□□□ -0.66
MET28YIR017C MYO1P08964 1928 aa10.93□□□□□ -0.66
MET28YIR017C TUF1P02992 437 aaKnown RBP10.92□□□□□ -0.66
MET28YIR017C TKL1P23254 680 aaKnown RBP10.92□□□□□ -0.66
MET28YIR017C MCM3P24279 971 aaKnown RBP10.92□□□□□ -0.66
MET28YIR017C URA1P28272 314 aaPredicted RBP10.92□□□□□ -0.66
MET28YIR017C MCM4P30665 933 aaKnown RBP10.92□□□□□ -0.66
MET28YIR017C RGT1P32862 1170 aa10.92□□□□□ -0.66
MET28YIR017C REG2P38232 338 aa10.92□□□□□ -0.66
MET28YIR017C GAA1P39012 614 aa10.92□□□□□ -0.66
MET28YIR017C CIR1P42940 261 aa10.92□□□□□ -0.66
MET28YIR017C CNM67P53865 581 aaKnown RBP10.92□□□□□ -0.66
MET28YIR017C YLR326WQ06170 240 aaKnown RBP10.92□□□□□ -0.66
MET28YIR017C YLH47Q06493 454 aa10.92□□□□□ -0.66
MET28YIR017C AIM44Q99299 758 aa10.92□□□□□ -0.66
MET28YIR017C ILV1P00927 576 aaKnown RBP10.91□□□□□ -0.66
MET28YIR017C VPS53P47061 822 aa10.91□□□□□ -0.66
MET28YIR017C MSC6Q08818 692 aaKnown RBP10.91□□□□□ -0.66
MET28YIR017C APC11Q12157 165 aa10.91□□□□□ -0.66
MET28YIR017C SMC6Q12749 1114 aa10.91□□□□□ -0.66
MET28YIR017C DDP1Q99321 188 aaKnown RBP10.91□□□□□ -0.66
MET28YIR017C FRS2P15625 503 aaKnown RBP10.9□□□□□ -0.66
MET28YIR017C PRE10P21242 288 aaKnown RBP RIP-Chip data10.9□□□□□ -0.66not detected
MET28YIR017C CLB5P30283 435 aa10.9□□□□□ -0.66
MET28YIR017C TFC4P33339 1025 aa10.9□□□□□ -0.66
MET28YIR017C PGM1P33401 570 aaKnown RBP10.9□□□□□ -0.66
MET28YIR017C CUE3P53137 624 aaKnown RBP10.9□□□□□ -0.66
MET28YIR017C SVF1Q05515 481 aa10.9□□□□□ -0.66
MET28YIR017C BMH1P29311 267 aaKnown RBP10.89□□□□□ -0.67
MET28YIR017C PSF2P40359 213 aa10.89□□□□□ -0.67
MET28YIR017C YGR153WP48238 217 aa10.89□□□□□ -0.67
MET28YIR017C PHM6Q05637 104 aa10.89□□□□□ -0.67
MET28YIR017C HIS4P00815 799 aaKnown RBP10.88□□□□□ -0.67
MET28YIR017C YKT6P36015 200 aaKnown RBP10.88□□□□□ -0.67
MET28YIR017C AVT3P36062 692 aa10.88□□□□□ -0.67
MET28YIR017C HMF1P40037 129 aaKnown RBP10.88□□□□□ -0.67
MET28YIR017C DAK2P43550 591 aa10.88□□□□□ -0.67
MET28YIR017C UBP15P50101 1230 aa10.88□□□□□ -0.67
MET28YIR017C CBK1P53894 756 aa10.88□□□□□ -0.67
MET28YIR017C WHI4Q07655 649 aaKnown RBP10.88□□□□□ -0.67
MET28YIR017C PGK1P00560 416 aaKnown RBP10.87□□□□□ -0.67
MET28YIR017C RPL22AP05749 121 aaKnown RBP10.87□□□□□ -0.67
MET28YIR017C DID4P36108 232 aa10.87□□□□□ -0.67
MET28YIR017C ARL1P38116 183 aaKnown RBP10.87□□□□□ -0.67
MET28YIR017C UBA2P52488 636 aa10.87□□□□□ -0.67
MET28YIR017C ZPR1P53303 486 aaKnown RBP10.87□□□□□ -0.67
MET28YIR017C ICL2Q12031 575 aa10.87□□□□□ -0.67
MET28YIR017C FOB1O13329 566 aa10.86□□□□□ -0.67
MET28YIR017C CKA2P19454 339 aa10.86□□□□□ -0.67
MET28YIR017C ROX1P25042 368 aa10.86□□□□□ -0.67
MET28YIR017C RVS167P39743 482 aaKnown RBP10.86□□□□□ -0.67
MET28YIR017C SNF7P39929 240 aaKnown RBP10.86□□□□□ -0.67
MET28YIR017C ROG3P43602 733 aa10.86□□□□□ -0.67
MET28YIR017C YPT11P48559 417 aa10.86□□□□□ -0.67
MET28YIR017C CRD1Q07560 283 aa10.86□□□□□ -0.67
MET28YIR017C TRM11Q12463 433 aa10.86□□□□□ -0.67
MET28YIR017C CLN3P13365 580 aa10.85□□□□□ -0.67
MET28YIR017C ESS1P22696 170 aa10.85□□□□□ -0.67
MET28YIR017C TIM23P32897 222 aa10.85□□□□□ -0.67
MET28YIR017C UBP11P36026 717 aa10.85□□□□□ -0.67
MET28YIR017C DBP7P36120 742 aaKnown RBP10.85□□□□□ -0.67
MET28YIR017C THI6P41835 540 aa10.85□□□□□ -0.67
MET28YIR017C GPD2P41911 440 aaKnown RBP10.85□□□□□ -0.67
MET28YIR017C VTC2P43585 828 aa10.85□□□□□ -0.67
MET28YIR017C CTR1P49573 406 aa10.85□□□□□ -0.67
MET28YIR017C YGL039WP53183 348 aaKnown RBP10.85□□□□□ -0.67
MET28YIR017C PGA2P53903 129 aa10.85□□□□□ -0.67
MET28YIR017C GPA1P08539 472 aa10.84□□□□□ -0.67
MET28YIR017C YUR1P26725 428 aa10.84□□□□□ -0.67
MET28YIR017C CDC15P27636 974 aa10.84□□□□□ -0.67
MET28YIR017C RPN12P32496 274 aa10.84□□□□□ -0.67
MET28YIR017C SUV3P32580 737 aa10.84□□□□□ -0.67
MET28YIR017C SAC6P32599 642 aaKnown RBP10.84□□□□□ -0.67
MET28YIR017C PET10P36139 283 aa10.84□□□□□ -0.67
MET28YIR017C TVP38P36164 337 aa10.84□□□□□ -0.67
MET28YIR017C YER130CP39959 443 aa10.84□□□□□ -0.67
MET28YIR017C ADY4Q05955 493 aa10.84□□□□□ -0.67
MET28YIR017C PSR2Q07949 397 aa10.84□□□□□ -0.67
MET28YIR017C SUP45P12385 437 aaKnown RBP10.83□□□□□ -0.68
MET28YIR017C DIP5P53388 608 aa10.83□□□□□ -0.68
MET28YIR017C VMS1Q04311 632 aaKnown RBP10.83□□□□□ -0.68
MET28YIR017C YMR321CQ04898 105 aa10.83□□□□□ -0.68
MET28YIR017C FUS2Q05670 677 aa10.83□□□□□ -0.68
MET28YIR017C YLL058WQ12198 575 aa10.83□□□□□ -0.68
MET28YIR017C YDR461C-AQ2V2P7 80 aa10.83□□□□□ -0.68
MET28YIR017C SRD1P09007 221 aa10.82□□□□□ -0.68
MET28YIR017C CDC48P25694 835 aaKnown RBP10.82□□□□□ -0.68
MET28YIR017C HIR1P32479 840 aa10.82□□□□□ -0.68
MET28YIR017C FYV10P40492 516 aa10.82□□□□□ -0.68
MET28YIR017C YJR107WP47145 328 aa10.82□□□□□ -0.68
MET28YIR017C TRS33Q99394 268 aa10.82□□□□□ -0.68
MET28YIR017C POX1P13711 748 aa10.81□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms