RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	ERF2	Q06551	359 aa		3.93	□□□□□ -1.78
TMA108	YIL137C	ENV9	Q08651	330 aa		3.93	□□□□□ -1.78
TMA108	YIL137C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.93	□□□□□ -1.78
TMA108	YIL137C	CMP2	P14747	604 aa		3.93	□□□□□ -1.78
TMA108	YIL137C	DHR2	P36009	735 aa	Predicted RBP	3.93	□□□□□ -1.78
TMA108	YIL137C	GCD10	P41814	478 aa		3.93	□□□□□ -1.78
TMA108	YIL137C	SAM37	P50110	327 aa		3.93	□□□□□ -1.78
TMA108	YIL137C	MEP3	P53390	489 aa		3.93	□□□□□ -1.78
TMA108	YIL137C	ALO1	P54783	526 aa	Known RBP	3.93	□□□□□ -1.78
TMA108	YIL137C	SPN1	Q06505	410 aa	Predicted RBP	3.93	□□□□□ -1.78
TMA108	YIL137C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
TMA108	YIL137C	TRK1	P12685	1235 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	PEP7	P32609	515 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	SOH1	P38633	127 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	EMW1	P42842	904 aa	Known RBP	3.92	□□□□□ -1.78
TMA108	YIL137C	NUT1	P53114	1132 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	ENV11	P53246	860 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	PBP1	P53297	722 aa	Known RBP	3.92	□□□□□ -1.78
TMA108	YIL137C	CTR9	P89105	1077 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	SHE9	Q04172	456 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	PSR2	Q07949	397 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	NYV1	Q12255	253 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	COB	P00163	385 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	TFC3	P34111	1160 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	YBR238C	P38330	731 aa	Known RBP	3.92	□□□□□ -1.78
TMA108	YIL137C	TPA1	P40032	644 aa	Known RBP	3.92	□□□□□ -1.78
TMA108	YIL137C	ERR3	P42222	437 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	RET2	P43621	546 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	NIT2	P47016	307 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	SSL2	Q00578	843 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	MTQ2	Q03920	221 aa	Predicted RBP	3.92	□□□□□ -1.78
TMA108	YIL137C	ARA2	Q04212	335 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	YLR352W	Q06479	807 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	CEX1	Q12453	761 aa		3.92	□□□□□ -1.78
TMA108	YIL137C	PTP2	P29461	750 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	VPH1	P32563	840 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	VPS41	P38959	992 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	GDH3	P39708	457 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	DOT6	P40059	670 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	ISM1	P48526	1002 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	UBA2	P52488	636 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	UTP8	P53276	713 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	PUS6	P53294	404 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	RCF1	Q03713	159 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	RIX7	Q07844	837 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	TFB4	Q12004	338 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	CMR1	Q12510	522 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	MET8	P15807	274 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	YEF3	P16521	1044 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	PET123	P17558	318 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	CBF2	P32504	956 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	GGA2	P38817	585 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	VTC2	P43585	828 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	RAD17	P48581	401 aa		3.91	□□□□□ -1.78
TMA108	YIL137C	BUL2	Q03758	920 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	HEL2	Q05580	639 aa	Known RBP	3.91	□□□□□ -1.78
TMA108	YIL137C	AGP1	P25376	633 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	RAD51	P25454	400 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	DUR3	P33413	735 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	ACA1	P39970	489 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	SAP185	P40856	1058 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	HEH2	Q03281	663 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	SPO71	Q03868	1245 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	EIS1	Q05050	843 aa	Known RBP	3.9	□□□□□ -1.78
TMA108	YIL137C	RGA2	Q06407	1009 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	CDC73	Q06697	393 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	RSC58	Q07979	502 aa		3.9	□□□□□ -1.78
TMA108	YIL137C	INH1	P01097	85 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	SPT2	P06843	333 aa	Predicted RBP	3.9	□□□□□ -1.79
TMA108	YIL137C	SBP1	P10080	294 aa	Known RBP	3.9	□□□□□ -1.79
TMA108	YIL137C	VAN1	P23642	535 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	PPH3	P32345	308 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	CCC2	P38995	1004 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	LSM5	P40089	93 aa	Known RBP	3.9	□□□□□ -1.79
TMA108	YIL137C	IRR1	P40541	1150 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	CWC24	P53769	259 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	SNP1	Q00916	300 aa	Predicted RBP	3.9	□□□□□ -1.79
TMA108	YIL137C	AVO1	Q08236	1176 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	SCM3	Q12334	223 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	OSH2	Q12451	1283 aa		3.9	□□□□□ -1.79
TMA108	YIL137C	VBA5	P36172	582 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	YJR115W	P47152	169 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	NSE5	Q03718	556 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	MCD1	Q12158	566 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	TOM70	P07213	617 aa	Known RBP	3.89	□□□□□ -1.79
TMA108	YIL137C	HSP60	P19882	572 aa	Known RBP	3.89	□□□□□ -1.79
TMA108	YIL137C	PCL2	P25693	308 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	RAD16	P31244	790 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	DPH2	P32461	534 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	PET309	P32522	965 aa	Predicted RBP	3.89	□□□□□ -1.79
TMA108	YIL137C	HBS1	P32769	611 aa	Known RBP	3.89	□□□□□ -1.79
TMA108	YIL137C	NPL6	P32832	435 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	YKL050C	P35736	922 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	APM2	P38700	605 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	HUL4	P40985	892 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	TRS33	Q99394	268 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	SSM4	P40318	1319 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	CBP3	P21560	335 aa		3.89	□□□□□ -1.79
TMA108	YIL137C	VMA8	P32610	256 aa	Known RBP	3.89	□□□□□ -1.79
TMA108	YIL137C	ISC10	P32645	267 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms