RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YLL054CQ12244 843 aa5.96□□□□□ -1.46
SDS3YIL084C SNT2P53127 1403 aa5.96□□□□□ -1.46
SDS3YIL084C TAF13P11747 167 aa5.95□□□□□ -1.46
SDS3YIL084C PIC2P40035 300 aa5.95□□□□□ -1.46
SDS3YIL084C PDR10P51533 1564 aa5.95□□□□□ -1.46
SDS3YIL084C YCR015CP25616 317 aa5.94□□□□□ -1.46
SDS3YIL084C EXO5P38289 585 aa5.94□□□□□ -1.46
SDS3YIL084C MTR4P47047 1073 aaKnown RBP5.94□□□□□ -1.46
SDS3YIL084C GCV1P48015 400 aa5.94□□□□□ -1.46
SDS3YIL084C YMR074CQ04773 145 aa5.94□□□□□ -1.46
SDS3YIL084C DNF3Q12674 1656 aa5.94□□□□□ -1.46
SDS3YIL084C SEC23P15303 768 aaKnown RBP5.93□□□□□ -1.46
SDS3YIL084C VMA4P22203 233 aaKnown RBP5.93□□□□□ -1.46
SDS3YIL084C ARL1P38116 183 aaKnown RBP5.93□□□□□ -1.46
SDS3YIL084C ATG14P38270 344 aa5.93□□□□□ -1.46
SDS3YIL084C XKS1P42826 600 aa5.93□□□□□ -1.46
SDS3YIL084C YGL140CP53120 1219 aa5.93□□□□□ -1.46
SDS3YIL084C GIC2Q06648 383 aa5.93□□□□□ -1.46
SDS3YIL084C USO1P25386 1790 aa5.93□□□□□ -1.46
SDS3YIL084C RAD27P26793 382 aa5.92□□□□□ -1.46
SDS3YIL084C MEC3Q02574 474 aa5.92□□□□□ -1.46
SDS3YIL084C MRL1Q06815 381 aa5.92□□□□□ -1.46
SDS3YIL084C PIN2Q12057 282 aa5.92□□□□□ -1.46
SDS3YIL084C DFG16Q99234 619 aa5.92□□□□□ -1.46
SDS3YIL084C TY1A-LR4P0C2I8 440 aaKnown RBP5.91□□□□□ -1.46
SDS3YIL084C TY1A-DR6P0CX70 440 aa5.91□□□□□ -1.46
SDS3YIL084C TY1A-ER1P0CX71 440 aa5.91□□□□□ -1.46
SDS3YIL084C TY1A-LR2P0CX72 440 aa5.91□□□□□ -1.46
SDS3YIL084C TY1A-PLP0CX73 440 aa5.91□□□□□ -1.46
SDS3YIL084C TY1A-JR1P0CX74 440 aa5.91□□□□□ -1.46
SDS3YIL084C TY1A-LR3P0CX75 440 aa5.91□□□□□ -1.46
SDS3YIL084C TY1A-ML2P0CX76 440 aa5.91□□□□□ -1.46
SDS3YIL084C TAF1P46677 1066 aa5.91□□□□□ -1.46
SDS3YIL084C CWC24P53769 259 aa5.91□□□□□ -1.46
SDS3YIL084C VPS16Q03308 798 aa5.91□□□□□ -1.46
SDS3YIL084C RTT10Q08924 1013 aa5.91□□□□□ -1.46
SDS3YIL084C TY1A-GR1Q12085 440 aa5.91□□□□□ -1.46
SDS3YIL084C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.91□□□□□ -1.46
SDS3YIL084C TY1A-OLQ92392 440 aaKnown RBP5.91□□□□□ -1.46
SDS3YIL084C IQG1Q12280 1495 aa5.9□□□□□ -1.46
SDS3YIL084C PDR15Q04182 1529 aaKnown RBP5.9□□□□□ -1.46
SDS3YIL084C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
SDS3YIL084C GCR1P07261 785 aa5.9□□□□□ -1.46
SDS3YIL084C YKL222CP35995 705 aa5.9□□□□□ -1.46
SDS3YIL084C REI1P38344 393 aaPredicted RBP5.9□□□□□ -1.46
SDS3YIL084C NIT1P40447 199 aa5.9□□□□□ -1.46
SDS3YIL084C TMA46Q12000 345 aaKnown RBP5.9□□□□□ -1.46
SDS3YIL084C CHC1P22137 1653 aaKnown RBP5.9□□□□□ -1.47
SDS3YIL084C GDB1Q06625 1536 aa5.89□□□□□ -1.47
SDS3YIL084C MLP2P40457 1679 aa5.89□□□□□ -1.47
SDS3YIL084C CDC34P14682 295 aa5.89□□□□□ -1.47
SDS3YIL084C GAS1P22146 559 aaKnown RBP5.89□□□□□ -1.47
SDS3YIL084C WHI3P34761 661 aaKnown RBP5.89□□□□□ -1.47
SDS3YIL084C ENT3P47160 408 aa5.89□□□□□ -1.47
SDS3YIL084C NUP157P40064 1391 aaKnown RBP5.89□□□□□ -1.47
SDS3YIL084C TRM3Q07527 1436 aa5.89□□□□□ -1.47
SDS3YIL084C ARO1P08566 1588 aaKnown RBP5.89□□□□□ -1.47
SDS3YIL084C RDH54P38086 958 aa5.88□□□□□ -1.47
SDS3YIL084C NEM1P38757 446 aa5.88□□□□□ -1.47
SDS3YIL084C VAC8P39968 578 aa5.88□□□□□ -1.47
SDS3YIL084C SLS1P42900 643 aa5.88□□□□□ -1.47
SDS3YIL084C ECL1P48235 211 aa5.88□□□□□ -1.47
SDS3YIL084C SIW14P53965 281 aa5.88□□□□□ -1.47
SDS3YIL084C ALD6P54115 500 aaKnown RBP5.88□□□□□ -1.47
SDS3YIL084C UTP5Q04177 643 aaKnown RBP5.88□□□□□ -1.47
SDS3YIL084C EST2Q06163 884 aa5.88□□□□□ -1.47
SDS3YIL084C HDA2Q06629 674 aa5.88□□□□□ -1.47
SDS3YIL084C AVO1Q08236 1176 aa5.88□□□□□ -1.47
SDS3YIL084C YOR223WQ12015 292 aa5.88□□□□□ -1.47
SDS3YIL084C YTA7P40340 1379 aa5.88□□□□□ -1.47
SDS3YIL084C PDR12Q02785 1511 aa5.88□□□□□ -1.47
SDS3YIL084C ADD66P36040 267 aa5.87□□□□□ -1.47
SDS3YIL084C GDE1Q02979 1223 aa5.86□□□□□ -1.47
SDS3YIL084C RKM2Q03942 479 aa5.86□□□□□ -1.47
SDS3YIL084C CDA2Q06703 312 aa5.86□□□□□ -1.47
SDS3YIL084C ESC8Q08119 714 aa5.86□□□□□ -1.47
SDS3YIL084C LAP2Q10740 671 aa5.86□□□□□ -1.47
SDS3YIL084C ALG6Q12001 544 aaKnown RBP5.86□□□□□ -1.47
SDS3YIL084C DED1P06634 604 aaKnown RBP5.85□□□□□ -1.47
SDS3YIL084C HEM13P11353 328 aaKnown RBP5.85□□□□□ -1.47
SDS3YIL084C HSE1P38753 452 aa5.85□□□□□ -1.47
SDS3YIL084C DOT1Q04089 582 aaKnown RBP5.85□□□□□ -1.47
SDS3YIL084C GPT2P36148 743 aa5.84□□□□□ -1.47
SDS3YIL084C YAR028WP39548 234 aa5.84□□□□□ -1.47
SDS3YIL084C KRI1P42846 591 aaKnown RBP5.84□□□□□ -1.47
SDS3YIL084C GNP1P48813 663 aa5.84□□□□□ -1.47
SDS3YIL084C ROD1Q02805 837 aa5.84□□□□□ -1.47
SDS3YIL084C WRS1Q12109 432 aaKnown RBP5.84□□□□□ -1.47
SDS3YIL084C BUD3P25558 1636 aa5.84□□□□□ -1.47
SDS3YIL084C STH1P32597 1359 aa5.83□□□□□ -1.48
SDS3YIL084C DUT1P33317 147 aa5.83□□□□□ -1.48
SDS3YIL084C MMM1P41800 426 aa5.83□□□□□ -1.48
SDS3YIL084C FAA4P47912 694 aaKnown RBP5.83□□□□□ -1.48
SDS3YIL084C YNR063WP53749 607 aa5.83□□□□□ -1.48
SDS3YIL084C HSP78P33416 811 aa5.82□□□□□ -1.48
SDS3YIL084C TSA1P34760 196 aaKnown RBP5.82□□□□□ -1.48
SDS3YIL084C HXT13P39924 564 aa5.82□□□□□ -1.48
SDS3YIL084C PRP43P53131 767 aaKnown RBP5.82□□□□□ -1.48
SDS3YIL084C YGR045CP53229 120 aa5.82□□□□□ -1.48
SDS3YIL084C YGR053CP53234 283 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms