RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W NIT1P40447 199 aa6.69□□□□□ -1.34
SEC28YIL076W CNN1P43618 361 aa6.69□□□□□ -1.34
SEC28YIL076W PRP43P53131 767 aaKnown RBP6.69□□□□□ -1.34
SEC28YIL076W CDA2Q06703 312 aa6.69□□□□□ -1.34
SEC28YIL076W NBA1Q08229 501 aaKnown RBP6.69□□□□□ -1.34
SEC28YIL076W RTT10Q08924 1013 aa6.69□□□□□ -1.34
SEC28YIL076W DBP5P20449 482 aaKnown RBP6.68□□□□□ -1.34
SEC28YIL076W RAD27P26793 382 aa6.68□□□□□ -1.34
SEC28YIL076W PET112P33893 541 aa6.68□□□□□ -1.34
SEC28YIL076W CCZ1P38273 704 aa6.68□□□□□ -1.34
SEC28YIL076W FOL2P51601 243 aaKnown RBP6.68□□□□□ -1.34
SEC28YIL076W MLS1P30952 554 aa6.67□□□□□ -1.34
SEC28YIL076W RER2P35196 286 aa6.67□□□□□ -1.34
SEC28YIL076W BAP2P38084 609 aa6.67□□□□□ -1.34
SEC28YIL076W RPN3P40016 523 aaKnown RBP6.67□□□□□ -1.34
SEC28YIL076W YER152CP10356 443 aa6.66□□□□□ -1.34
SEC28YIL076W SNF5P18480 905 aa6.66□□□□□ -1.34
SEC28YIL076W YFL054CP43549 646 aa6.66□□□□□ -1.34
SEC28YIL076W SPS1P08458 490 aa6.65□□□□□ -1.34
SEC28YIL076W DUT1P33317 147 aa6.65□□□□□ -1.34
SEC28YIL076W PIK1P39104 1066 aa6.65□□□□□ -1.34
SEC28YIL076W MPH1P40562 993 aa6.65□□□□□ -1.34
SEC28YIL076W MRPL22P53881 309 aa6.65□□□□□ -1.34
SEC28YIL076W TIF35Q04067 274 aaKnown RBP6.65□□□□□ -1.34
SEC28YIL076W MCM7P38132 845 aa6.64□□□□□ -1.35
SEC28YIL076W UBP5P39944 805 aa6.64□□□□□ -1.35
SEC28YIL076W RSB1Q08417 382 aa6.64□□□□□ -1.35
SEC28YIL076W TMA46Q12000 345 aaKnown RBP6.64□□□□□ -1.35
SEC28YIL076W CDC34P14682 295 aa6.63□□□□□ -1.35
SEC28YIL076W PUF4P25339 888 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
SEC28YIL076W HNT2P49775 206 aa6.63□□□□□ -1.35
SEC28YIL076W EEB1Q02891 456 aa6.62□□□□□ -1.35
SEC28YIL076W TRP2P00899 507 aaKnown RBP6.61□□□□□ -1.35
SEC28YIL076W AIM3P38266 947 aaKnown RBP6.61□□□□□ -1.35
SEC28YIL076W SNO2P53823 222 aa6.61□□□□□ -1.35
SEC28YIL076W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
SEC28YIL076W LYP1P32487 611 aa6.6□□□□□ -1.35
SEC28YIL076W MNR2P35724 969 aa6.6□□□□□ -1.35
SEC28YIL076W SEC26P41810 973 aaKnown RBP6.6□□□□□ -1.35
SEC28YIL076W MET10P39692 1035 aa6.59□□□□□ -1.35
SEC28YIL076W GNT1Q12096 491 aa6.59□□□□□ -1.35
SEC28YIL076W PRP6P19735 899 aaPredicted RBP6.58□□□□□ -1.36
SEC28YIL076W MOT2P34909 587 aaKnown RBP6.58□□□□□ -1.36
SEC28YIL076W ABZ1P37254 787 aaPredicted RBP6.58□□□□□ -1.36
SEC28YIL076W ENV11P53246 860 aa6.58□□□□□ -1.36
SEC28YIL076W BAS1P22035 811 aa6.57□□□□□ -1.36
SEC28YIL076W THI80P35202 319 aa6.57□□□□□ -1.36
SEC28YIL076W MXR1P40029 184 aa6.57□□□□□ -1.36
SEC28YIL076W TYW3P53177 273 aa6.57□□□□□ -1.36
SEC28YIL076W INO1P11986 533 aa6.56□□□□□ -1.36
SEC28YIL076W YPL066WQ12194 479 aa6.56□□□□□ -1.36
SEC28YIL076W CYC1P00044 109 aaPredicted RBP6.55□□□□□ -1.36
SEC28YIL076W RPL11AP0C0W9 174 aaKnown RBP6.55□□□□□ -1.36
SEC28YIL076W FAA4P47912 694 aaKnown RBP6.55□□□□□ -1.36
SEC28YIL076W RIM8P53179 542 aa6.55□□□□□ -1.36
SEC28YIL076W SVS1Q12254 260 aa6.55□□□□□ -1.36
SEC28YIL076W RPL11BQ3E757 174 aaPredicted RBP6.55□□□□□ -1.36
SEC28YIL076W RPS13P05756 151 aaKnown RBP6.54□□□□□ -1.36
SEC28YIL076W DBP2P24783 546 aaKnown RBP6.54□□□□□ -1.36
SEC28YIL076W RFC5P38251 354 aa6.54□□□□□ -1.36
SEC28YIL076W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
SEC28YIL076W SPP382Q06411 708 aaPredicted RBP6.54□□□□□ -1.36
SEC28YIL076W YPL277CQ08989 487 aa6.54□□□□□ -1.36
SEC28YIL076W UGA2P38067 497 aa6.53□□□□□ -1.36
SEC28YIL076W GDE1Q02979 1223 aa6.53□□□□□ -1.36
SEC28YIL076W SPO20Q04359 397 aa6.53□□□□□ -1.36
SEC28YIL076W YOR352WQ08816 343 aa6.53□□□□□ -1.36
SEC28YIL076W ACM1Q08981 209 aa6.53□□□□□ -1.36
SEC28YIL076W RIB2Q12362 591 aaKnown RBP6.53□□□□□ -1.36
SEC28YIL076W RKM4Q12504 494 aa6.53□□□□□ -1.36
SEC28YIL076W SOD2P00447 233 aa6.52□□□□□ -1.37
SEC28YIL076W YKL107WP34251 309 aa6.52□□□□□ -1.37
SEC28YIL076W YGL176CP46945 554 aa6.52□□□□□ -1.37
SEC28YIL076W YGR053CP53234 283 aa6.52□□□□□ -1.37
SEC28YIL076W RSM24Q03976 319 aa6.52□□□□□ -1.37
SEC28YIL076W SGD1Q06132 899 aa6.52□□□□□ -1.37
SEC28YIL076W ESC2Q06340 456 aa6.52□□□□□ -1.37
SEC28YIL076W CLN2P20438 545 aa6.51□□□□□ -1.37
SEC28YIL076W TOD6P34219 525 aa6.51□□□□□ -1.37
SEC28YIL076W PNT1P38969 423 aa6.51□□□□□ -1.37
SEC28YIL076W MAD1P40957 749 aa6.51□□□□□ -1.37
SEC28YIL076W YLR225CQ05948 407 aaKnown RBP6.51□□□□□ -1.37
SEC28YIL076W JIP5Q06214 492 aaPredicted RBP6.51□□□□□ -1.37
SEC28YIL076W ESC8Q08119 714 aa6.51□□□□□ -1.37
SEC28YIL076W BI4P03879 638 aa6.5□□□□□ -1.37
SEC28YIL076W CMP2P14747 604 aa6.5□□□□□ -1.37
SEC28YIL076W SLA2P33338 968 aa6.5□□□□□ -1.37
SEC28YIL076W LAM1P38851 1228 aa6.5□□□□□ -1.37
SEC28YIL076W VPS16Q03308 798 aa6.5□□□□□ -1.37
SEC28YIL076W ROT1Q03691 256 aa6.5□□□□□ -1.37
SEC28YIL076W YDR132CQ03900 495 aa6.5□□□□□ -1.37
SEC28YIL076W ATG13Q06628 738 aa6.5□□□□□ -1.37
SEC28YIL076W PIN2Q12057 282 aa6.5□□□□□ -1.37
SEC28YIL076W GAL10P04397 699 aa6.49□□□□□ -1.37
SEC28YIL076W KIN2P13186 1147 aaKnown RBP6.49□□□□□ -1.37
SEC28YIL076W APL1P27351 700 aa6.49□□□□□ -1.37
SEC28YIL076W SIP5P40210 489 aaKnown RBP6.49□□□□□ -1.37
SEC28YIL076W CWC24P53769 259 aa6.49□□□□□ -1.37
SEC28YIL076W SVF1Q05515 481 aa6.49□□□□□ -1.37
SEC28YIL076W ACE2P21192 770 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms