RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C HOS4P40480 1083 aa3.95□□□□□ -1.78
SSM4YIL030C YNL320WP42840 284 aa3.95□□□□□ -1.78
SSM4YIL030C MDR1P53258 950 aa3.95□□□□□ -1.78
SSM4YIL030C TFC6Q06339 672 aa3.95□□□□□ -1.78
SSM4YIL030C FAL1Q12099 399 aaKnown RBP3.95□□□□□ -1.78
SSM4YIL030C TAF3Q12297 353 aa3.95□□□□□ -1.78
SSM4YIL030C PDC1P06169 563 aaKnown RBP3.95□□□□□ -1.78
SSM4YIL030C LAS1P36146 502 aaPredicted RBP3.95□□□□□ -1.78
SSM4YIL030C IAH1P41734 238 aa3.95□□□□□ -1.78
SSM4YIL030C YMR1P47147 688 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SSM4YIL030C FOX2Q02207 900 aaKnown RBP3.95□□□□□ -1.78
SSM4YIL030C YPL225WQ08971 146 aaKnown RBP3.95□□□□□ -1.78
SSM4YIL030C YEL076C-AP0CX16 216 aa3.95□□□□□ -1.78
SSM4YIL030C YLR464WP0CX17 216 aa3.95□□□□□ -1.78
SSM4YIL030C SPO12P17123 173 aa3.95□□□□□ -1.78
SSM4YIL030C HCA4P20448 770 aaKnown RBP3.95□□□□□ -1.78
SSM4YIL030C NUP133P36161 1157 aa3.95□□□□□ -1.78
SSM4YIL030C YEL076CP39971 216 aa3.95□□□□□ -1.78
SSM4YIL030C VID28P40547 921 aa3.95□□□□□ -1.78
SSM4YIL030C VTC2P43585 828 aa3.95□□□□□ -1.78
SSM4YIL030C MTG1Q03151 367 aaPredicted RBP3.95□□□□□ -1.78
SSM4YIL030C PGA3Q12746 312 aaKnown RBP3.95□□□□□ -1.78
SSM4YIL030C CHO2P05374 869 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C TOA1P32773 286 aa3.94□□□□□ -1.78
SSM4YIL030C CIC1P38779 376 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C SMX2P40204 77 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C MAD1P40957 749 aa3.94□□□□□ -1.78
SSM4YIL030C YJL107CP42947 387 aa3.94□□□□□ -1.78
SSM4YIL030C NMA2P53204 395 aa3.94□□□□□ -1.78
SSM4YIL030C GFD1Q04839 188 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C EST2Q06163 884 aa3.94□□□□□ -1.78
SSM4YIL030C OSH2Q12451 1283 aa3.94□□□□□ -1.78
SSM4YIL030C KRS1P15180 591 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C CCM1P48237 864 aaPredicted RBP3.94□□□□□ -1.78
SSM4YIL030C GDE1Q02979 1223 aa3.94□□□□□ -1.78
SSM4YIL030C SGD1Q06132 899 aa3.94□□□□□ -1.78
SSM4YIL030C SES1P07284 462 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C TOM71P38825 639 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C STT3P39007 718 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C YNL193WP53870 558 aa3.94□□□□□ -1.78
SSM4YIL030C HDA1P53973 706 aa3.94□□□□□ -1.78
SSM4YIL030C ALD6P54115 500 aaKnown RBP3.94□□□□□ -1.78
SSM4YIL030C FMP42Q04991 504 aa3.94□□□□□ -1.78
SSM4YIL030C ATP2P00830 511 aaKnown RBP3.93□□□□□ -1.78
SSM4YIL030C NUC1P08466 329 aa3.93□□□□□ -1.78
SSM4YIL030C PRP9P19736 530 aaKnown RBP3.93□□□□□ -1.78
SSM4YIL030C SEC14P24280 304 aaKnown RBP3.93□□□□□ -1.78
SSM4YIL030C SRP101P32916 621 aa3.93□□□□□ -1.78
SSM4YIL030C OSW1Q08692 278 aa3.93□□□□□ -1.78
SSM4YIL030C ADH4P10127 382 aa3.93□□□□□ -1.78
SSM4YIL030C MRPS28P21771 286 aa3.93□□□□□ -1.78
SSM4YIL030C MAK31P23059 88 aa3.93□□□□□ -1.78
SSM4YIL030C APL2P36000 726 aaPredicted RBP3.93□□□□□ -1.78
SSM4YIL030C AKR1P39010 764 aa3.93□□□□□ -1.78
SSM4YIL030C APT1P49435 187 aaKnown RBP3.93□□□□□ -1.78
SSM4YIL030C TAN1P53072 289 aaPredicted RBP3.93□□□□□ -1.78
SSM4YIL030C PCL10P53124 433 aa3.93□□□□□ -1.78
SSM4YIL030C NBA1Q08229 501 aaKnown RBP3.93□□□□□ -1.78
SSM4YIL030C SLP1Q12232 587 aa3.93□□□□□ -1.78
SSM4YIL030C RPS3P05750 240 aaKnown RBP3.93□□□□□ -1.78
SSM4YIL030C MFT1P33441 392 aaKnown RBP3.93□□□□□ -1.78
SSM4YIL030C ATG3P40344 310 aa3.93□□□□□ -1.78
SSM4YIL030C CDC53Q12018 815 aaKnown RBP3.93□□□□□ -1.78
SSM4YIL030C TRP2P00899 507 aaKnown RBP3.92□□□□□ -1.78
SSM4YIL030C PRE10P21242 288 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SSM4YIL030C ANP1P32629 500 aa3.92□□□□□ -1.78
SSM4YIL030C LOS1P33418 1100 aaPredicted RBP3.92□□□□□ -1.78
SSM4YIL030C HXT8P40886 569 aa3.92□□□□□ -1.78
SSM4YIL030C TDA10P42938 290 aa3.92□□□□□ -1.78
SSM4YIL030C PTK2P47116 818 aaKnown RBP3.92□□□□□ -1.78
SSM4YIL030C ORM1P53224 222 aa3.92□□□□□ -1.78
SSM4YIL030C HAT1Q12341 374 aa3.92□□□□□ -1.78
SSM4YIL030C RPS6AP0CX37 236 aaKnown RBP3.92□□□□□ -1.78
SSM4YIL030C RPS6BP0CX38 236 aaPredicted RBP3.92□□□□□ -1.78
SSM4YIL030C PRP22P24384 1145 aaKnown RBP3.92□□□□□ -1.78
SSM4YIL030C YME1P32795 747 aa3.92□□□□□ -1.78
SSM4YIL030C IES2P40154 320 aa3.92□□□□□ -1.78
SSM4YIL030C MPH1P40562 993 aa3.92□□□□□ -1.78
SSM4YIL030C VPS53P47061 822 aa3.92□□□□□ -1.78
SSM4YIL030C MIG2P53035 382 aa3.92□□□□□ -1.78
SSM4YIL030C YGR021WP53212 290 aa3.92□□□□□ -1.78
SSM4YIL030C TIP41Q12199 356 aa3.92□□□□□ -1.78
SSM4YIL030C RAD61Q99359 647 aa3.92□□□□□ -1.78
SSM4YIL030C RAD5P32849 1169 aaPredicted RBP3.92□□□□□ -1.78
SSM4YIL030C YHR131CP38835 850 aa3.92□□□□□ -1.78
SSM4YIL030C RTS1P38903 757 aa3.92□□□□□ -1.78
SSM4YIL030C INP51P40559 946 aaKnown RBP3.92□□□□□ -1.78
SSM4YIL030C TRS85P46944 698 aa3.92□□□□□ -1.78
SSM4YIL030C FCP1Q03254 732 aa3.92□□□□□ -1.78
SSM4YIL030C DSE3Q08729 430 aa3.92□□□□□ -1.78
SSM4YIL030C GPM3Q12326 303 aa3.92□□□□□ -1.78
SSM4YIL030C KTR2P33550 425 aa3.91□□□□□ -1.78
SSM4YIL030C SWH1P35845 1188 aa3.91□□□□□ -1.78
SSM4YIL030C RPS0BP46654 252 aaKnown RBP3.91□□□□□ -1.78
SSM4YIL030C LSC2P53312 427 aa3.91□□□□□ -1.78
SSM4YIL030C PIG1Q06216 648 aa3.91□□□□□ -1.78
SSM4YIL030C YAP7Q08182 245 aa3.91□□□□□ -1.78
SSM4YIL030C GIN4Q12263 1142 aa3.91□□□□□ -1.78
SSM4YIL030C MAM3Q12296 706 aa3.91□□□□□ -1.78
SSM4YIL030C CLF1Q12309 687 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms