RNA–Protein interactions for RNA: YIL011W

TIR3, Transcript of Cell wall mannoprotein, yeast

Gene TIR3, Length 810 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR3	YIL011W	UBA2	P52488	636 aa		11.19	□□□□□ -0.62
TIR3	YIL011W	BUL2	Q03758	920 aa	Known RBP	11.19	□□□□□ -0.62
TIR3	YIL011W	LCD1	Q04377	747 aa		11.19	□□□□□ -0.62
TIR3	YIL011W	CST9	Q06032	482 aa		11.19	□□□□□ -0.62
TIR3	YIL011W	GUD1	Q07729	489 aa		11.19	□□□□□ -0.62
TIR3	YIL011W	SMC6	Q12749	1114 aa		11.19	□□□□□ -0.62
TIR3	YIL011W	CDC60	P26637	1090 aa	Known RBP	11.18	□□□□□ -0.62
TIR3	YIL011W	IXR1	P33417	597 aa		11.18	□□□□□ -0.62
TIR3	YIL011W	ISW1	P38144	1129 aa		11.18	□□□□□ -0.62
TIR3	YIL011W	RSC30	P38781	883 aa		11.18	□□□□□ -0.62
TIR3	YIL011W	GPB2	P39717	880 aa		11.18	□□□□□ -0.62
TIR3	YIL011W	DAK2	P43550	591 aa		11.18	□□□□□ -0.62
TIR3	YIL011W	DUS3	Q06053	668 aa	Known RBP	11.18	□□□□□ -0.62
TIR3	YIL011W	ARP6	Q12509	438 aa		11.18	□□□□□ -0.62
TIR3	YIL011W	CDC19	P00549	500 aa	Known RBP	11.17	□□□□□ -0.62
TIR3	YIL011W	TAF13	P11747	167 aa		11.17	□□□□□ -0.62
TIR3	YIL011W	SHP1	P34223	423 aa		11.17	□□□□□ -0.62
TIR3	YIL011W	ASH1	P34233	588 aa		11.17	□□□□□ -0.62
TIR3	YIL011W	MCR1	P36060	302 aa	Known RBP	11.17	□□□□□ -0.62
TIR3	YIL011W	APE3	P37302	537 aa	Known RBP	11.17	□□□□□ -0.62
TIR3	YIL011W	ERG7	P38604	731 aa		11.17	□□□□□ -0.62
TIR3	YIL011W	TY1B-A	O13527	1196 aa	Known RBP	11.16	□□□□□ -0.62
TIR3	YIL011W	PKC1	P24583	1151 aa		11.16	□□□□□ -0.62
TIR3	YIL011W	EUG1	P32474	517 aa		11.16	□□□□□ -0.62
TIR3	YIL011W	NOC2	P39744	710 aa	Known RBP	11.16	□□□□□ -0.62
TIR3	YIL011W	SPR3	P41901	512 aa		11.16	□□□□□ -0.62
TIR3	YIL011W	HUL5	P53119	910 aa		11.16	□□□□□ -0.62
TIR3	YIL011W	CBK1	P53894	756 aa		11.16	□□□□□ -0.62
TIR3	YIL011W	ORC4	P54791	529 aa		11.16	□□□□□ -0.62
TIR3	YIL011W	ADY4	Q05955	493 aa		11.16	□□□□□ -0.62
TIR3	YIL011W	SRP40	P32583	406 aa	Predicted RBP	11.15	□□□□□ -0.62
TIR3	YIL011W	PET10	P36139	283 aa		11.15	□□□□□ -0.62
TIR3	YIL011W	YGR125W	P53273	1036 aa		11.15	□□□□□ -0.62
TIR3	YIL011W	CNM67	P53865	581 aa	Known RBP	11.15	□□□□□ -0.62
TIR3	YIL011W	YPR148C	Q06523	435 aa		11.15	□□□□□ -0.62
TIR3	YIL011W	FOB1	O13329	566 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	ATE1	P16639	503 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	CKA2	P19454	339 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	GSY2	P27472	705 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	HIR1	P32479	840 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	PGM1	P33401	570 aa	Known RBP	11.14	□□□□□ -0.63
TIR3	YIL011W	THI6	P41835	540 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	VTC2	P43585	828 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	TY3A-G	Q12173	290 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	TY3A-I	Q99219	290 aa		11.14	□□□□□ -0.63
TIR3	YIL011W	ETP1	P38748	585 aa	Known RBP	11.13	□□□□□ -0.63
TIR3	YIL011W	FYV10	P40492	516 aa		11.13	□□□□□ -0.63
TIR3	YIL011W	ROG3	P43602	733 aa		11.13	□□□□□ -0.63
TIR3	YIL011W	PGA2	P53903	129 aa		11.13	□□□□□ -0.63
TIR3	YIL011W	PTA1	Q01329	785 aa	Predicted RBP	11.13	□□□□□ -0.63
TIR3	YIL011W	SLD5	Q03406	294 aa		11.13	□□□□□ -0.63
TIR3	YIL011W	SVF1	Q05515	481 aa		11.13	□□□□□ -0.63
TIR3	YIL011W	YLR326W	Q06170	240 aa	Known RBP	11.13	□□□□□ -0.63
TIR3	YIL011W	TLG2	Q08144	397 aa		11.13	□□□□□ -0.63
TIR3	YIL011W	TIF6	Q12522	245 aa	Known RBP	11.13	□□□□□ -0.63
TIR3	YIL011W	CLB5	P30283	435 aa		11.12	□□□□□ -0.63
TIR3	YIL011W	MIC60	P36112	540 aa		11.12	□□□□□ -0.63
TIR3	YIL011W	MRPL10	P36520	322 aa		11.12	□□□□□ -0.63
TIR3	YIL011W	SSL2	Q00578	843 aa		11.12	□□□□□ -0.63
TIR3	YIL011W	WHI4	Q07655	649 aa	Known RBP	11.12	□□□□□ -0.63
TIR3	YIL011W	ISA1	Q07821	250 aa	Predicted RBP	11.12	□□□□□ -0.63
TIR3	YIL011W	FKS1	P38631	1876 aa	Known RBP	11.11	□□□□□ -0.63
TIR3	YIL011W	PGK1	P00560	416 aa	Known RBP	11.11	□□□□□ -0.63
TIR3	YIL011W	REG2	P38232	338 aa		11.11	□□□□□ -0.63
TIR3	YIL011W	ATG1	P53104	897 aa		11.11	□□□□□ -0.63
TIR3	YIL011W	HCR1	Q05775	265 aa	Known RBP	11.11	□□□□□ -0.63
TIR3	YIL011W	DUS4	Q06063	367 aa		11.11	□□□□□ -0.63
TIR3	YIL011W	AFT2	Q08957	416 aa		11.11	□□□□□ -0.63
TIR3	YIL011W	ERP3	Q12403	225 aa		11.11	□□□□□ -0.63
TIR3	YIL011W	YEL076C-A	P0CX16	216 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	YLR464W	P0CX17	216 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	ESS1	P22696	170 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	TKL1	P23254	680 aa	Known RBP	11.1	□□□□□ -0.63
TIR3	YIL011W	RAM2	P29703	316 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	SEC8	P32855	1065 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	MOT2	P34909	587 aa	Known RBP	11.1	□□□□□ -0.63
TIR3	YIL011W	SIP3	P38717	1229 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	PIH1	P38768	344 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	YEL076C	P39971	216 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	DIP5	P53388	608 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	GFD1	Q04839	188 aa	Known RBP	11.1	□□□□□ -0.63
TIR3	YIL011W	PHM6	Q05637	104 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	CRD1	Q07560	283 aa		11.1	□□□□□ -0.63
TIR3	YIL011W	SUP45	P12385	437 aa	Known RBP	11.09	□□□□□ -0.63
TIR3	YIL011W	CLN3	P13365	580 aa		11.09	□□□□□ -0.63
TIR3	YIL011W	MIP1	P15801	1254 aa		11.09	□□□□□ -0.63
TIR3	YIL011W	SUV3	P32580	737 aa		11.09	□□□□□ -0.63
TIR3	YIL011W	UBP11	P36026	717 aa		11.09	□□□□□ -0.63
TIR3	YIL011W	ADE17	P38009	592 aa	Known RBP	11.09	□□□□□ -0.63
TIR3	YIL011W	GPD2	P41911	440 aa	Known RBP	11.09	□□□□□ -0.63
TIR3	YIL011W	BRE2	P43132	505 aa		11.09	□□□□□ -0.63
TIR3	YIL011W	CTR1	P49573	406 aa		11.09	□□□□□ -0.63
TIR3	YIL011W	UBP15	P50101	1230 aa		11.09	□□□□□ -0.63
TIR3	YIL011W	YGL039W	P53183	348 aa	Known RBP	11.09	□□□□□ -0.63
TIR3	YIL011W	ZPR1	P53303	486 aa	Known RBP	11.09	□□□□□ -0.63
TIR3	YIL011W	SRD1	P09007	221 aa		11.08	□□□□□ -0.64
TIR3	YIL011W	ISY1	P21374	235 aa	Predicted RBP	11.08	□□□□□ -0.64
TIR3	YIL011W	PPS1	P38148	807 aa		11.08	□□□□□ -0.64
TIR3	YIL011W	VPS29	P38759	282 aa		11.08	□□□□□ -0.64
TIR3	YIL011W	TFG2	P41896	400 aa	Predicted RBP	11.08	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 85.7 ms