RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C MSN5P52918 1224 aa3.35□□□□□ -1.87
NMD2YHR077C GFD1Q04839 188 aaKnown RBP3.35□□□□□ -1.87
NMD2YHR077C PSR2Q07949 397 aa3.35□□□□□ -1.87
NMD2YHR077C YAP7Q08182 245 aa3.35□□□□□ -1.87
NMD2YHR077C SLK19Q08581 821 aaKnown RBP3.35□□□□□ -1.87
NMD2YHR077C TUB2P02557 457 aaKnown RBP3.35□□□□□ -1.87
NMD2YHR077C THR4P16120 514 aaKnown RBP3.35□□□□□ -1.87
NMD2YHR077C GAP1P19145 602 aaPredicted RBP3.35□□□□□ -1.87
NMD2YHR077C STO1P34160 861 aaKnown RBP3.35□□□□□ -1.87
NMD2YHR077C UBP11P36026 717 aa3.35□□□□□ -1.87
NMD2YHR077C SET5P38890 526 aaKnown RBP3.35□□□□□ -1.87
NMD2YHR077C TPM2P40414 161 aa3.35□□□□□ -1.87
NMD2YHR077C SHQ1P40486 507 aaPredicted RBP3.35□□□□□ -1.87
NMD2YHR077C VPS38Q05919 439 aa3.35□□□□□ -1.87
NMD2YHR077C SPP382Q06411 708 aaPredicted RBP3.35□□□□□ -1.87
NMD2YHR077C AFG2P32794 780 aa3.34□□□□□ -1.87
NMD2YHR077C UGA4P32837 571 aa3.34□□□□□ -1.87
NMD2YHR077C VTC2P43585 828 aa3.34□□□□□ -1.87
NMD2YHR077C SML1Q04964 104 aa3.34□□□□□ -1.87
NMD2YHR077C YPL216WQ08964 1102 aa3.34□□□□□ -1.87
NMD2YHR077C RRG1Q12167 365 aaPredicted RBP3.34□□□□□ -1.87
NMD2YHR077C TRK2P28584 889 aa3.34□□□□□ -1.87
NMD2YHR077C PAP1P29468 568 aaKnown RBP3.34□□□□□ -1.87
NMD2YHR077C LTV1P34078 463 aa3.34□□□□□ -1.87
NMD2YHR077C PGM2P37012 569 aaKnown RBP3.34□□□□□ -1.87
NMD2YHR077C VPS8P39702 1274 aa3.34□□□□□ -1.87
NMD2YHR077C ACK1Q07622 623 aaPredicted RBP3.34□□□□□ -1.87
NMD2YHR077C MLH2Q07980 695 aa3.34□□□□□ -1.87
NMD2YHR077C FAL1Q12099 399 aaKnown RBP3.34□□□□□ -1.87
NMD2YHR077C CKA2P19454 339 aa3.34□□□□□ -1.88
NMD2YHR077C RRP43P25359 394 aaPredicted RBP3.34□□□□□ -1.88
NMD2YHR077C SPC110P32380 944 aa3.34□□□□□ -1.88
NMD2YHR077C MNN4P36044 1178 aa3.34□□□□□ -1.88
NMD2YHR077C MVP1P40959 511 aaKnown RBP3.34□□□□□ -1.88
NMD2YHR077C PRY3P47033 881 aa3.34□□□□□ -1.88
NMD2YHR077C CCM1P48237 864 aaPredicted RBP3.34□□□□□ -1.88
NMD2YHR077C YGR273CP53329 174 aa3.34□□□□□ -1.88
NMD2YHR077C DSE4P53753 1117 aa3.34□□□□□ -1.88
NMD2YHR077C ARK1P53974 638 aa3.34□□□□□ -1.88
NMD2YHR077C TMA64Q04600 565 aaKnown RBP3.34□□□□□ -1.88
NMD2YHR077C YCG1Q06680 1035 aa3.34□□□□□ -1.88
NMD2YHR077C ATG9Q12142 997 aa3.34□□□□□ -1.88
NMD2YHR077C SFI1Q12369 946 aa3.34□□□□□ -1.88
NMD2YHR077C YKL068W-AQ3E826 78 aa3.34□□□□□ -1.88
NMD2YHR077C ECM29P38737 1868 aa3.33□□□□□ -1.88
NMD2YHR077C TUF1P02992 437 aaKnown RBP3.33□□□□□ -1.88
NMD2YHR077C CTT1P06115 562 aa3.33□□□□□ -1.88
NMD2YHR077C PRP22P24384 1145 aaKnown RBP3.33□□□□□ -1.88
NMD2YHR077C SCJ1P25303 377 aa3.33□□□□□ -1.88
NMD2YHR077C YKL091CP33324 310 aaKnown RBP3.33□□□□□ -1.88
NMD2YHR077C YEL1P34225 687 aa3.33□□□□□ -1.88
NMD2YHR077C UGA2P38067 497 aa3.33□□□□□ -1.88
NMD2YHR077C MCX1P38323 520 aaPredicted RBP3.33□□□□□ -1.88
NMD2YHR077C EFM2P38347 419 aa3.33□□□□□ -1.88
NMD2YHR077C SMF1P38925 575 aa3.33□□□□□ -1.88
NMD2YHR077C SHC1P39000 512 aa3.33□□□□□ -1.88
NMD2YHR077C TIF4632P39936 914 aaKnown RBP3.33□□□□□ -1.88
NMD2YHR077C BUD16P39988 312 aa3.33□□□□□ -1.88
NMD2YHR077C IES1P43579 692 aa3.33□□□□□ -1.88
NMD2YHR077C ROG3P43602 733 aa3.33□□□□□ -1.88
NMD2YHR077C OSW7P43611 510 aa3.33□□□□□ -1.88
NMD2YHR077C NBP1P52919 319 aaPredicted RBP3.33□□□□□ -1.88
NMD2YHR077C MAL13P53338 473 aa3.33□□□□□ -1.88
NMD2YHR077C ORC4P54791 529 aa3.33□□□□□ -1.88
NMD2YHR077C UME1Q03010 460 aa3.33□□□□□ -1.88
NMD2YHR077C DIG1Q03063 452 aaKnown RBP3.33□□□□□ -1.88
NMD2YHR077C AIM33Q04516 312 aa3.33□□□□□ -1.88
NMD2YHR077C VIP1Q06685 1146 aaKnown RBP3.33□□□□□ -1.88
NMD2YHR077C ERG11P10614 530 aa3.33□□□□□ -1.88
NMD2YHR077C ADP1P25371 1049 aa3.33□□□□□ -1.88
NMD2YHR077C SAC6P32599 642 aaKnown RBP3.33□□□□□ -1.88
NMD2YHR077C YDR278CQ05612 105 aa3.33□□□□□ -1.88
NMD2YHR077C ESC2Q06340 456 aa3.33□□□□□ -1.88
NMD2YHR077C YDL124WQ07551 312 aaKnown RBP3.33□□□□□ -1.88
NMD2YHR077C YLR001CQ07895 862 aa3.33□□□□□ -1.88
NMD2YHR077C CDC37P06101 506 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C PET123P17558 318 aa3.32□□□□□ -1.88
NMD2YHR077C RAD53P22216 821 aa3.32□□□□□ -1.88
NMD2YHR077C MSH3P25336 1018 aa3.32□□□□□ -1.88
NMD2YHR077C DPB3P27344 201 aa3.32□□□□□ -1.88
NMD2YHR077C PTC4P38089 393 aa3.32□□□□□ -1.88
NMD2YHR077C UBP9P39967 754 aa3.32□□□□□ -1.88
NMD2YHR077C PRP31P49704 494 aaPredicted RBP3.32□□□□□ -1.88
NMD2YHR077C GYL1Q04322 720 aa3.32□□□□□ -1.88
NMD2YHR077C SFH1Q06168 426 aa3.32□□□□□ -1.88
NMD2YHR077C CLF1Q12309 687 aaPredicted RBP3.32□□□□□ -1.88
NMD2YHR077C TOM70P07213 617 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C KRS1P15180 591 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C DAL7P21826 554 aa3.32□□□□□ -1.88
NMD2YHR077C PDC6P26263 563 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C CDC11P32458 415 aa3.32□□□□□ -1.88
NMD2YHR077C GCG1P32656 232 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C TGL1P34163 548 aa3.32□□□□□ -1.88
NMD2YHR077C NUP82P40368 713 aa3.32□□□□□ -1.88
NMD2YHR077C ULP2P40537 1034 aaPredicted RBP3.32□□□□□ -1.88
NMD2YHR077C APT1P49435 187 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C VPS4P52917 437 aa3.32□□□□□ -1.88
NMD2YHR077C GUP1P53154 560 aa3.32□□□□□ -1.88
NMD2YHR077C RTC4P53850 401 aa3.32□□□□□ -1.88
NMD2YHR077C CBK1P53894 756 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms