RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C MUM2P38236 366 aa3.39□□□□□ -1.87
RPN1YHR027C GGA2P38817 585 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C RPL17BP46990 184 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C POB3Q04636 552 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C RTT109Q07794 436 aa3.39□□□□□ -1.87
RPN1YHR027C NUP188P52593 1655 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C GPA1P08539 472 aa3.39□□□□□ -1.87
RPN1YHR027C SSC1P0CS90 654 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C CMP2P14747 604 aa3.39□□□□□ -1.87
RPN1YHR027C SRP40P32583 406 aaPredicted RBP3.39□□□□□ -1.87
RPN1YHR027C LOS1P33418 1100 aaPredicted RBP3.39□□□□□ -1.87
RPN1YHR027C PRX1P34227 261 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C KES1P35844 434 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C ETP1P38748 585 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C TDA11P38854 504 aa3.39□□□□□ -1.87
RPN1YHR027C SSP1P38871 571 aa3.39□□□□□ -1.87
RPN1YHR027C TMA22P47089 198 aaPredicted RBP3.39□□□□□ -1.87
RPN1YHR027C SGM1P47166 707 aa3.39□□□□□ -1.87
RPN1YHR027C YGR266WP53326 701 aa3.39□□□□□ -1.87
RPN1YHR027C BOP3P53958 396 aa3.39□□□□□ -1.87
RPN1YHR027C MUB1Q03162 620 aa3.39□□□□□ -1.87
RPN1YHR027C SPO71Q03868 1245 aa3.39□□□□□ -1.87
RPN1YHR027C DCS1Q06151 350 aa3.39□□□□□ -1.87
RPN1YHR027C YPR097WQ06839 1073 aa3.39□□□□□ -1.87
RPN1YHR027C YOL036WQ08206 761 aa3.39□□□□□ -1.87
RPN1YHR027C MAK21Q12176 1025 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C HSP42Q12329 375 aa3.39□□□□□ -1.87
RPN1YHR027C RMP1Q12530 201 aa3.39□□□□□ -1.87
RPN1YHR027C RAD1P06777 1100 aa3.39□□□□□ -1.87
RPN1YHR027C YMR085WP0CF18 432 aa3.39□□□□□ -1.87
RPN1YHR027C VPS1P21576 704 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C RPC34P32910 317 aa3.39□□□□□ -1.87
RPN1YHR027C PSY4P38193 441 aa3.39□□□□□ -1.87
RPN1YHR027C PEX18P38855 283 aa3.39□□□□□ -1.87
RPN1YHR027C INA22P40576 216 aa3.39□□□□□ -1.87
RPN1YHR027C SAP185P40856 1058 aa3.39□□□□□ -1.87
RPN1YHR027C ALG2P43636 503 aa3.39□□□□□ -1.87
RPN1YHR027C TY4A-JP47023 414 aa3.39□□□□□ -1.87
RPN1YHR027C SQS1P53866 767 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C PNG1Q02890 363 aa3.39□□□□□ -1.87
RPN1YHR027C NOP6Q07623 225 aaKnown RBP3.39□□□□□ -1.87
RPN1YHR027C THR1P17423 357 aaKnown RBP3.38□□□□□ -1.87
RPN1YHR027C BUD23P25627 275 aaPredicted RBP3.38□□□□□ -1.87
RPN1YHR027C GSY2P27472 705 aa3.38□□□□□ -1.87
RPN1YHR027C ARC19P33204 171 aaKnown RBP3.38□□□□□ -1.87
RPN1YHR027C NIP100P33420 868 aa3.38□□□□□ -1.87
RPN1YHR027C UGA2P38067 497 aa3.38□□□□□ -1.87
RPN1YHR027C CAJ1P39101 391 aa3.38□□□□□ -1.87
RPN1YHR027C BUD16P39988 312 aa3.38□□□□□ -1.87
RPN1YHR027C BBC1P47068 1157 aa3.38□□□□□ -1.87
RPN1YHR027C RTC4P53850 401 aa3.38□□□□□ -1.87
RPN1YHR027C TRS120Q04183 1289 aa3.38□□□□□ -1.87
RPN1YHR027C MCP2Q06567 569 aa3.38□□□□□ -1.87
RPN1YHR027C PMT7Q06644 662 aa3.38□□□□□ -1.87
RPN1YHR027C LAM6Q08001 693 aa3.38□□□□□ -1.87
RPN1YHR027C APC5Q08683 685 aa3.38□□□□□ -1.87
RPN1YHR027C RKM1Q08961 583 aaPredicted RBP3.38□□□□□ -1.87
RPN1YHR027C REP1P03871 373 aa3.38□□□□□ -1.87
RPN1YHR027C CDC16P09798 840 aa3.38□□□□□ -1.87
RPN1YHR027C SEN2P16658 377 aa3.38□□□□□ -1.87
RPN1YHR027C RPA135P22138 1203 aaKnown RBP3.38□□□□□ -1.87
RPN1YHR027C VAN1P23642 535 aa3.38□□□□□ -1.87
RPN1YHR027C SEG2P34250 1132 aa3.38□□□□□ -1.87
RPN1YHR027C IFA38P38286 347 aa3.38□□□□□ -1.87
RPN1YHR027C YHL012WP38709 493 aa3.38□□□□□ -1.87
RPN1YHR027C PXA1P41909 870 aa3.38□□□□□ -1.87
RPN1YHR027C LAM5P43560 674 aa3.38□□□□□ -1.87
RPN1YHR027C ESF2P53743 316 aaKnown RBP3.38□□□□□ -1.87
RPN1YHR027C ALF1P53904 254 aa3.38□□□□□ -1.87
RPN1YHR027C SFB2P53953 876 aa3.38□□□□□ -1.87
RPN1YHR027C BDF2Q07442 638 aa3.38□□□□□ -1.87
RPN1YHR027C OSW1Q08692 278 aa3.38□□□□□ -1.87
RPN1YHR027C MSH5Q12175 901 aa3.38□□□□□ -1.87
RPN1YHR027C RIO1Q12196 484 aaKnown RBP3.38□□□□□ -1.87
RPN1YHR027C SCM3Q12334 223 aa3.38□□□□□ -1.87
RPN1YHR027C BUD3P25558 1636 aa3.38□□□□□ -1.87
RPN1YHR027C LAM4P38800 1345 aa3.37□□□□□ -1.87
RPN1YHR027C YRF1-2P40105 1681 aa3.37□□□□□ -1.87
RPN1YHR027C PGK1P00560 416 aaKnown RBP3.37□□□□□ -1.87
RPN1YHR027C RPL19AP0CX82 189 aaKnown RBP3.37□□□□□ -1.87
RPN1YHR027C RPL19BP0CX83 189 aaPredicted RBP3.37□□□□□ -1.87
RPN1YHR027C HCA4P20448 770 aaKnown RBP3.37□□□□□ -1.87
RPN1YHR027C CDC15P27636 974 aa3.37□□□□□ -1.87
RPN1YHR027C AFG2P32794 780 aa3.37□□□□□ -1.87
RPN1YHR027C NFU1P32860 256 aa3.37□□□□□ -1.87
RPN1YHR027C ESL2P36168 1195 aa3.37□□□□□ -1.87
RPN1YHR027C FZO1P38297 855 aa3.37□□□□□ -1.87
RPN1YHR027C SIP3P38717 1229 aa3.37□□□□□ -1.87
RPN1YHR027C SET1P38827 1080 aaKnown RBP3.37□□□□□ -1.87
RPN1YHR027C AIM9P40053 627 aaKnown RBP3.37□□□□□ -1.87
RPN1YHR027C GPD2P41911 440 aaKnown RBP3.37□□□□□ -1.87
RPN1YHR027C STB2P46679 850 aa3.37□□□□□ -1.87
RPN1YHR027C SNX4P47057 423 aa3.37□□□□□ -1.87
RPN1YHR027C YPT11P48559 417 aa3.37□□□□□ -1.87
RPN1YHR027C VPS75P53853 264 aa3.37□□□□□ -1.87
RPN1YHR027C SPC24Q04477 213 aa3.37□□□□□ -1.87
RPN1YHR027C ATG13Q06628 738 aa3.37□□□□□ -1.87
RPN1YHR027C AVO1Q08236 1176 aa3.37□□□□□ -1.87
RPN1YHR027C RTT10Q08924 1013 aa3.37□□□□□ -1.87
RPN1YHR027C DPS1P04802 557 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms