RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W YFL040WP43562 540 aa6.72□□□□□ -1.33
VMA16YHR026W TY1A-MR1Q04215 440 aa6.72□□□□□ -1.33
VMA16YHR026W TY3A-GQ12173 290 aa6.72□□□□□ -1.33
VMA16YHR026W TY3A-IQ99219 290 aa6.72□□□□□ -1.33
VMA16YHR026W OCT1P35999 772 aa6.71□□□□□ -1.34
VMA16YHR026W ACO2P39533 789 aa6.71□□□□□ -1.34
VMA16YHR026W YPL034WQ03083 165 aa6.71□□□□□ -1.34
VMA16YHR026W VMA3P25515 160 aa6.7□□□□□ -1.34
VMA16YHR026W CDC60P26637 1090 aaKnown RBP6.7□□□□□ -1.34
VMA16YHR026W NUP133P36161 1157 aa6.7□□□□□ -1.34
VMA16YHR026W GLO3P38682 493 aaKnown RBP6.7□□□□□ -1.34
VMA16YHR026W NUG1P40010 520 aaKnown RBP6.7□□□□□ -1.34
VMA16YHR026W QDR2P40474 542 aa6.7□□□□□ -1.34
VMA16YHR026W YDL176WQ12027 708 aa6.7□□□□□ -1.34
VMA16YHR026W CFT2Q12102 859 aaPredicted RBP6.7□□□□□ -1.34
VMA16YHR026W MCD4P36051 919 aa6.69□□□□□ -1.34
VMA16YHR026W MRPL16P38064 232 aa6.69□□□□□ -1.34
VMA16YHR026W ERP5P38819 212 aa6.69□□□□□ -1.34
VMA16YHR026W GYP7P48365 746 aa6.69□□□□□ -1.34
VMA16YHR026W YDR306CQ06640 478 aa6.69□□□□□ -1.34
VMA16YHR026W STB3Q12427 513 aa6.69□□□□□ -1.34
VMA16YHR026W AHC1Q12433 566 aa6.69□□□□□ -1.34
VMA16YHR026W YBL113CQ7M4S9 792 aa6.69□□□□□ -1.34
VMA16YHR026W CCP1P00431 361 aa6.68□□□□□ -1.34
VMA16YHR026W PMA1P05030 918 aaKnown RBP6.68□□□□□ -1.34
VMA16YHR026W SUP35P05453 685 aaKnown RBP6.68□□□□□ -1.34
VMA16YHR026W LEU1P07264 779 aaKnown RBP6.68□□□□□ -1.34
VMA16YHR026W RAD2P07276 1031 aa6.68□□□□□ -1.34
VMA16YHR026W RPB10P22139 70 aa6.68□□□□□ -1.34
VMA16YHR026W GRS1P38088 690 aaKnown RBP6.68□□□□□ -1.34
VMA16YHR026W AIM21P40563 679 aa6.68□□□□□ -1.34
VMA16YHR026W YFH7P43591 353 aa6.68□□□□□ -1.34
VMA16YHR026W SUT1P53032 299 aaKnown RBP6.68□□□□□ -1.34
VMA16YHR026W CUZ1P53899 274 aa6.68□□□□□ -1.34
VMA16YHR026W FMP30Q02883 468 aa6.68□□□□□ -1.34
VMA16YHR026W MTC5Q03897 1148 aa6.68□□□□□ -1.34
VMA16YHR026W THI22Q06490 572 aa6.68□□□□□ -1.34
VMA16YHR026W UTP4Q06679 776 aaKnown RBP6.68□□□□□ -1.34
VMA16YHR026W ICL2Q12031 575 aa6.68□□□□□ -1.34
VMA16YHR026W YOR131CQ12486 218 aa6.68□□□□□ -1.34
VMA16YHR026W ADP1P25371 1049 aa6.67□□□□□ -1.34
VMA16YHR026W KAP122P32767 1081 aa6.67□□□□□ -1.34
VMA16YHR026W UIP5P36137 443 aa6.67□□□□□ -1.34
VMA16YHR026W QDR1P40475 563 aa6.67□□□□□ -1.34
VMA16YHR026W YMR265CQ03508 461 aaKnown RBP6.67□□□□□ -1.34
VMA16YHR026W RPT3P33298 428 aaKnown RBP6.66□□□□□ -1.34
VMA16YHR026W FUN12P39730 1002 aaKnown RBP6.66□□□□□ -1.34
VMA16YHR026W ACA1P39970 489 aa6.66□□□□□ -1.34
VMA16YHR026W VAB2P40003 282 aa6.66□□□□□ -1.34
VMA16YHR026W LYS14P40971 790 aa6.66□□□□□ -1.34
VMA16YHR026W HEF3P53978 1044 aaKnown RBP6.66□□□□□ -1.34
VMA16YHR026W LSO1Q3E827 93 aa6.66□□□□□ -1.34
VMA16YHR026W MRP7P12687 371 aa6.65□□□□□ -1.34
VMA16YHR026W RGP1P16664 663 aa6.65□□□□□ -1.34
VMA16YHR026W YML020WQ03722 664 aa6.65□□□□□ -1.34
VMA16YHR026W SUT2Q12286 268 aa6.65□□□□□ -1.34
VMA16YHR026W SNU66Q12420 587 aaPredicted RBP6.65□□□□□ -1.34
VMA16YHR026W YDR034W-BQ6Q5X2 51 aa6.65□□□□□ -1.34
VMA16YHR026W TRL1P09880 827 aaKnown RBP6.64□□□□□ -1.35
VMA16YHR026W DIT1P21623 536 aa6.64□□□□□ -1.35
VMA16YHR026W NAB2P32505 525 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
VMA16YHR026W MSC7P38694 644 aa6.64□□□□□ -1.35
VMA16YHR026W SSF1P38789 453 aaPredicted RBP6.64□□□□□ -1.35
VMA16YHR026W KRE33P53914 1056 aaKnown RBP6.64□□□□□ -1.35
VMA16YHR026W HIP1P06775 603 aa6.63□□□□□ -1.35
VMA16YHR026W RPC31P17890 251 aa6.63□□□□□ -1.35
VMA16YHR026W KTR2P33550 425 aa6.63□□□□□ -1.35
VMA16YHR026W DYS1P38791 387 aa6.63□□□□□ -1.35
VMA16YHR026W MXR1P40029 184 aa6.63□□□□□ -1.35
VMA16YHR026W YIL092WP40497 633 aa6.63□□□□□ -1.35
VMA16YHR026W CUS1Q02554 436 aaPredicted RBP6.63□□□□□ -1.35
VMA16YHR026W RTT109Q07794 436 aa6.63□□□□□ -1.35
VMA16YHR026W MDM20Q12387 796 aaKnown RBP6.63□□□□□ -1.35
VMA16YHR026W TUS1Q06412 1307 aa6.62□□□□□ -1.35
VMA16YHR026W YBL028CP38202 106 aa6.62□□□□□ -1.35
VMA16YHR026W AFG3P39925 761 aa6.62□□□□□ -1.35
VMA16YHR026W MDJ2P42834 146 aa6.62□□□□□ -1.35
VMA16YHR026W BRE5P53741 515 aaKnown RBP6.62□□□□□ -1.35
VMA16YHR026W ADE12P80210 433 aaKnown RBP6.62□□□□□ -1.35
VMA16YHR026W SRT1Q03175 343 aa6.62□□□□□ -1.35
VMA16YHR026W SNF3P10870 884 aa6.61□□□□□ -1.35
VMA16YHR026W PRE10P21242 288 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
VMA16YHR026W YHR131CP38835 850 aa6.61□□□□□ -1.35
VMA16YHR026W CEM1P39525 442 aa6.61□□□□□ -1.35
VMA16YHR026W YJR107WP47145 328 aa6.61□□□□□ -1.35
VMA16YHR026W MET7Q08645 548 aa6.61□□□□□ -1.35
VMA16YHR026W APC11Q12157 165 aa6.61□□□□□ -1.35
VMA16YHR026W TUB2P02557 457 aaKnown RBP6.6□□□□□ -1.35
VMA16YHR026W MSN1P22148 382 aa6.6□□□□□ -1.35
VMA16YHR026W UBP12P39538 1254 aa6.6□□□□□ -1.35
VMA16YHR026W HXT8P40886 569 aa6.6□□□□□ -1.35
VMA16YHR026W YNR040WP53736 256 aa6.6□□□□□ -1.35
VMA16YHR026W PCL8Q08966 492 aa6.6□□□□□ -1.35
VMA16YHR026W DAL5P15365 543 aa6.59□□□□□ -1.35
VMA16YHR026W PTK1P36002 662 aaPredicted RBP6.59□□□□□ -1.35
VMA16YHR026W DUR1,2P32528 1835 aaKnown RBP6.59□□□□□ -1.35
VMA16YHR026W FPS1P23900 669 aa6.58□□□□□ -1.36
VMA16YHR026W MDL2P33311 773 aa6.58□□□□□ -1.36
VMA16YHR026W YIR042CP40586 236 aa6.58□□□□□ -1.36
VMA16YHR026W POL32P47110 350 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms