RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C YTA12P40341 825 aa9.59□□□□□ -0.87
SOD2YHR008C RVB2Q12464 471 aaKnown RBP9.59□□□□□ -0.87
SOD2YHR008C TIF1P10081 395 aaKnown RBP9.58□□□□□ -0.88
SOD2YHR008C TVP38P36164 337 aa9.58□□□□□ -0.88
SOD2YHR008C MYO1P08964 1928 aa9.58□□□□□ -0.88
SOD2YHR008C MOT1P32333 1867 aa9.57□□□□□ -0.88
SOD2YHR008C RPL40AP0CH08 128 aaKnown RBP9.57□□□□□ -0.88
SOD2YHR008C RPL40BP0CH09 128 aaKnown RBP9.57□□□□□ -0.88
SOD2YHR008C BET2P20133 325 aa9.57□□□□□ -0.88
SOD2YHR008C SRP54P20424 541 aaKnown RBP9.57□□□□□ -0.88
SOD2YHR008C MMF1P40185 145 aaKnown RBP9.57□□□□□ -0.88
SOD2YHR008C BIO5P53744 561 aaKnown RBP9.57□□□□□ -0.88
SOD2YHR008C HCR1Q05775 265 aaKnown RBP9.57□□□□□ -0.88
SOD2YHR008C VIP1Q06685 1146 aaKnown RBP9.57□□□□□ -0.88
SOD2YHR008C SIS1P25294 352 aaKnown RBP9.56□□□□□ -0.88
SOD2YHR008C KTR1P27810 393 aaKnown RBP9.56□□□□□ -0.88
SOD2YHR008C BUD2P33314 1104 aa9.56□□□□□ -0.88
SOD2YHR008C DRE2P36152 348 aa9.56□□□□□ -0.88
SOD2YHR008C NMD2P38798 1089 aaKnown RBP9.56□□□□□ -0.88
SOD2YHR008C YFL052WP43551 465 aa9.56□□□□□ -0.88
SOD2YHR008C MDR1P53258 950 aa9.56□□□□□ -0.88
SOD2YHR008C MRPS35P53292 345 aa9.56□□□□□ -0.88
SOD2YHR008C MYO5Q04439 1219 aaKnown RBP9.56□□□□□ -0.88
SOD2YHR008C BRE1Q07457 700 aaKnown RBP9.56□□□□□ -0.88
SOD2YHR008C SGO1Q08490 590 aa9.56□□□□□ -0.88
SOD2YHR008C MAP2P38174 421 aaKnown RBP9.55□□□□□ -0.88
SOD2YHR008C ARP1P38696 384 aa9.55□□□□□ -0.88
SOD2YHR008C PSP2P50109 593 aaKnown RBP9.55□□□□□ -0.88
SOD2YHR008C HDA1P53973 706 aa9.55□□□□□ -0.88
SOD2YHR008C RPL8AP17076 256 aaKnown RBP9.54□□□□□ -0.88
SOD2YHR008C UBC1P21734 215 aaKnown RBP9.54□□□□□ -0.88
SOD2YHR008C PWP2P25635 923 aaKnown RBP9.54□□□□□ -0.88
SOD2YHR008C RFS1P38234 210 aaKnown RBP9.54□□□□□ -0.88
SOD2YHR008C TPM2P40414 161 aa9.54□□□□□ -0.88
SOD2YHR008C HUL5P53119 910 aa9.54□□□□□ -0.88
SOD2YHR008C MDM1Q01846 1127 aa9.54□□□□□ -0.88
SOD2YHR008C MUK1Q02866 612 aa9.54□□□□□ -0.88
SOD2YHR008C SSF2Q12153 453 aaPredicted RBP9.54□□□□□ -0.88
SOD2YHR008C MAK31P23059 88 aa9.53□□□□□ -0.88
SOD2YHR008C CLB5P30283 435 aa9.53□□□□□ -0.88
SOD2YHR008C MRPL7P36519 292 aa9.53□□□□□ -0.88
SOD2YHR008C SAF1P38352 637 aa9.53□□□□□ -0.88
SOD2YHR008C LEO1P38439 464 aa9.53□□□□□ -0.88
SOD2YHR008C APM2P38700 605 aa9.53□□□□□ -0.88
SOD2YHR008C YEL025CP39991 1188 aa9.53□□□□□ -0.88
SOD2YHR008C MOB1P40484 314 aa9.53□□□□□ -0.88
SOD2YHR008C GCV2P49095 1034 aa9.53□□□□□ -0.88
SOD2YHR008C GPI13Q07830 1017 aa9.53□□□□□ -0.88
SOD2YHR008C SEN1Q00416 2231 aaKnown RBP9.53□□□□□ -0.88
SOD2YHR008C KTR4P38131 464 aa9.52□□□□□ -0.89
SOD2YHR008C SES1P07284 462 aaKnown RBP9.51□□□□□ -0.89
SOD2YHR008C PAN5P38787 379 aa9.51□□□□□ -0.89
SOD2YHR008C CCC2P38995 1004 aa9.51□□□□□ -0.89
SOD2YHR008C PUP3P25451 205 aaKnown RBP9.5□□□□□ -0.89
SOD2YHR008C ADK2P26364 225 aa9.5□□□□□ -0.89
SOD2YHR008C SKI2P35207 1287 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
SOD2YHR008C SAD1P43589 448 aa9.5□□□□□ -0.89
SOD2YHR008C PUF6Q04373 656 aaKnown RBP9.5□□□□□ -0.89
SOD2YHR008C DSE3Q08729 430 aa9.5□□□□□ -0.89
SOD2YHR008C FKS1P38631 1876 aaKnown RBP9.49□□□□□ -0.89
SOD2YHR008C SNF1P06782 633 aaKnown RBP9.49□□□□□ -0.89
SOD2YHR008C APE1P14904 514 aa9.49□□□□□ -0.89
SOD2YHR008C YKL097CP34245 136 aa9.49□□□□□ -0.89
SOD2YHR008C CRG1P38892 291 aaRIP-Chip data9.49□□□□□ -0.89not detected
SOD2YHR008C ESL1P40456 1118 aa9.49□□□□□ -0.89
SOD2YHR008C CIT3P43635 486 aa9.49□□□□□ -0.89
SOD2YHR008C ALG2P43636 503 aa9.49□□□□□ -0.89
SOD2YHR008C MFB1Q04922 465 aa9.49□□□□□ -0.89
SOD2YHR008C YDR344CQ05510 147 aa9.49□□□□□ -0.89
SOD2YHR008C SPN1Q06505 410 aaPredicted RBP9.49□□□□□ -0.89
SOD2YHR008C WHI4Q07655 649 aaKnown RBP9.49□□□□□ -0.89
SOD2YHR008C RRD2Q12461 358 aa9.49□□□□□ -0.89
SOD2YHR008C ARP6Q12509 438 aa9.49□□□□□ -0.89
SOD2YHR008C DID4P36108 232 aa9.48□□□□□ -0.89
SOD2YHR008C CSM2P40465 213 aa9.48□□□□□ -0.89
SOD2YHR008C FMP27Q06179 2628 aa9.47□□□□□ -0.89
SOD2YHR008C HCM1P25364 564 aa9.47□□□□□ -0.89
SOD2YHR008C RER2P35196 286 aa9.47□□□□□ -0.89
SOD2YHR008C TFA1P36100 482 aa9.47□□□□□ -0.89
SOD2YHR008C YHL026CP38740 315 aa9.47□□□□□ -0.89
SOD2YHR008C PEX28P38848 579 aa9.47□□□□□ -0.89
SOD2YHR008C SEC21P32074 935 aaKnown RBP9.46□□□□□ -0.9
SOD2YHR008C YNL134CP53912 376 aaKnown RBP9.46□□□□□ -0.9
SOD2YHR008C MNL2Q12205 849 aa9.46□□□□□ -0.9
SOD2YHR008C STB3Q12427 513 aa9.46□□□□□ -0.9
SOD2YHR008C PCD1Q12524 340 aa9.46□□□□□ -0.9
SOD2YHR008C TRP2P00899 507 aaKnown RBP9.45□□□□□ -0.9
SOD2YHR008C CDC16P09798 840 aa9.45□□□□□ -0.9
SOD2YHR008C PTC4P38089 393 aa9.45□□□□□ -0.9
SOD2YHR008C YAP1801P38856 637 aa9.45□□□□□ -0.9
SOD2YHR008C YHR202WP38887 602 aa9.45□□□□□ -0.9
SOD2YHR008C GDE1Q02979 1223 aa9.45□□□□□ -0.9
SOD2YHR008C UBX7P38349 436 aa9.44□□□□□ -0.9
SOD2YHR008C SUL1P38359 859 aa9.44□□□□□ -0.9
SOD2YHR008C RIM4P38741 713 aa9.44□□□□□ -0.9
SOD2YHR008C ALT2P52892 507 aa9.44□□□□□ -0.9
SOD2YHR008C FAP1P53971 965 aa9.44□□□□□ -0.9
SOD2YHR008C SVF1Q05515 481 aa9.44□□□□□ -0.9
SOD2YHR008C YLR257WQ06146 321 aaKnown RBP9.44□□□□□ -0.9
SOD2YHR008C TFC6Q06339 672 aa9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms