RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C YOR111WQ99210 232 aa8.4□□□□□ -1.06
PUP2YGR253C SES1P07284 462 aaKnown RBP8.39□□□□□ -1.07
PUP2YGR253C IDI1P15496 288 aa8.39□□□□□ -1.07
PUP2YGR253C KIN82P25341 720 aa8.39□□□□□ -1.07
PUP2YGR253C HMF1P40037 129 aaKnown RBP8.39□□□□□ -1.07
PUP2YGR253C OXR1Q08952 273 aa8.39□□□□□ -1.07
PUP2YGR253C CLB5P30283 435 aa8.38□□□□□ -1.07
PUP2YGR253C SMY2P32909 740 aaKnown RBP8.38□□□□□ -1.07
PUP2YGR253C TVP38P36164 337 aa8.38□□□□□ -1.07
PUP2YGR253C PSP2P50109 593 aaKnown RBP8.38□□□□□ -1.07
PUP2YGR253C SKY1Q03656 742 aa8.38□□□□□ -1.07
PUP2YGR253C ARP6Q12509 438 aa8.38□□□□□ -1.07
PUP2YGR253C RAD50P12753 1312 aa8.37□□□□□ -1.07
PUP2YGR253C URK1P27515 501 aa8.37□□□□□ -1.07
PUP2YGR253C PEP3P27801 918 aa8.37□□□□□ -1.07
PUP2YGR253C SUL1P38359 859 aa8.37□□□□□ -1.07
PUP2YGR253C INP52P50942 1183 aa8.37□□□□□ -1.07
PUP2YGR253C SVF1Q05515 481 aa8.37□□□□□ -1.07
PUP2YGR253C GPI13Q07830 1017 aa8.37□□□□□ -1.07
PUP2YGR253C CIT1P00890 479 aa8.36□□□□□ -1.07
PUP2YGR253C TPM1P17536 199 aaKnown RBP8.36□□□□□ -1.07
PUP2YGR253C RNR3P21672 869 aaKnown RBP8.36□□□□□ -1.07
PUP2YGR253C SIS1P25294 352 aaKnown RBP8.36□□□□□ -1.07
PUP2YGR253C RDH54P38086 958 aa8.36□□□□□ -1.07
PUP2YGR253C YEL025CP39991 1188 aa8.36□□□□□ -1.07
PUP2YGR253C OYE3P41816 400 aaPredicted RBP8.36□□□□□ -1.07
PUP2YGR253C MET13P53128 600 aa8.36□□□□□ -1.07
PUP2YGR253C MAP1Q01662 387 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07 RIP-Chip
PUP2YGR253C HEH2Q03281 663 aa8.36□□□□□ -1.07
PUP2YGR253C WHI4Q07655 649 aaKnown RBP8.36□□□□□ -1.07
PUP2YGR253C MSS51P32335 436 aa8.35□□□□□ -1.07
PUP2YGR253C SLX5P32828 619 aaKnown RBP8.35□□□□□ -1.07
PUP2YGR253C VID30P53076 958 aa8.35□□□□□ -1.07
PUP2YGR253C STI1P15705 589 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
PUP2YGR253C UBC1P21734 215 aaKnown RBP8.34□□□□□ -1.07
PUP2YGR253C RME1P32338 300 aaKnown RBP8.34□□□□□ -1.07
PUP2YGR253C UBP11P36026 717 aa8.34□□□□□ -1.07
PUP2YGR253C DRE2P36152 348 aa8.34□□□□□ -1.07
PUP2YGR253C ISW1P38144 1129 aa8.34□□□□□ -1.07
PUP2YGR253C SAD1P43589 448 aa8.34□□□□□ -1.07
PUP2YGR253C YNL034WP53963 612 aa8.34□□□□□ -1.07
PUP2YGR253C YNL018CP53976 612 aa8.34□□□□□ -1.07
PUP2YGR253C ORC4P54791 529 aa8.34□□□□□ -1.07
PUP2YGR253C CUS1Q02554 436 aaPredicted RBP8.34□□□□□ -1.07
PUP2YGR253C YDR341CQ05506 607 aaKnown RBP8.34□□□□□ -1.07
PUP2YGR253C MAG2Q06436 670 aaKnown RBP8.34□□□□□ -1.07
PUP2YGR253C MET6P05694 767 aaKnown RBP8.33□□□□□ -1.08
PUP2YGR253C MSD1P15179 658 aaKnown RBP8.33□□□□□ -1.08
PUP2YGR253C DID4P36108 232 aa8.33□□□□□ -1.08
PUP2YGR253C OPT1P40897 799 aa8.33□□□□□ -1.08
PUP2YGR253C MDR1P53258 950 aa8.33□□□□□ -1.08
PUP2YGR253C RIF1P29539 1916 aa8.33□□□□□ -1.08
PUP2YGR253C POL3P15436 1097 aa8.32□□□□□ -1.08
PUP2YGR253C AKR1P39010 764 aa8.32□□□□□ -1.08
PUP2YGR253C CCT3P39077 534 aaKnown RBP8.32□□□□□ -1.08
PUP2YGR253C ZPR1P53303 486 aaKnown RBP8.32□□□□□ -1.08
PUP2YGR253C CRD1Q07560 283 aa8.32□□□□□ -1.08
PUP2YGR253C FKS1P38631 1876 aaKnown RBP8.32□□□□□ -1.08
PUP2YGR253C SYN8P31377 255 aa8.31□□□□□ -1.08
PUP2YGR253C SLX1P38324 304 aa8.31□□□□□ -1.08
PUP2YGR253C YGR273CP53329 174 aa8.31□□□□□ -1.08
PUP2YGR253C PNG1Q02890 363 aa8.31□□□□□ -1.08
PUP2YGR253C OYE2Q03558 400 aaKnown RBP8.31□□□□□ -1.08
PUP2YGR253C SPO71Q03868 1245 aa8.31□□□□□ -1.08
PUP2YGR253C SMD2Q06217 110 aaKnown RBP8.31□□□□□ -1.08
PUP2YGR253C MMR1Q06324 491 aa8.31□□□□□ -1.08
PUP2YGR253C PGK1P00560 416 aaKnown RBP8.3□□□□□ -1.08
PUP2YGR253C PRC1P00729 532 aa8.3□□□□□ -1.08
PUP2YGR253C ESS1P22696 170 aa8.3□□□□□ -1.08
PUP2YGR253C CDC48P25694 835 aaKnown RBP8.3□□□□□ -1.08
PUP2YGR253C SIS2P36024 562 aa8.3□□□□□ -1.08
PUP2YGR253C BRN1P38170 754 aa8.3□□□□□ -1.08
PUP2YGR253C FAF1P40546 346 aaPredicted RBP8.3□□□□□ -1.08
PUP2YGR253C MUK1Q02866 612 aa8.3□□□□□ -1.08
PUP2YGR253C GDE1Q02979 1223 aa8.3□□□□□ -1.08
PUP2YGR253C PHM6Q05637 104 aa8.3□□□□□ -1.08
PUP2YGR253C YLR455WQ06188 304 aa8.3□□□□□ -1.08
PUP2YGR253C MAK11P20484 414 aaKnown RBP8.29□□□□□ -1.08
PUP2YGR253C SUV3P32580 737 aa8.29□□□□□ -1.08
PUP2YGR253C DSF2P38213 736 aa8.29□□□□□ -1.08
PUP2YGR253C GCV2P49095 1034 aa8.29□□□□□ -1.08
PUP2YGR253C HXT17P53631 564 aa8.29□□□□□ -1.08
PUP2YGR253C CNM67P53865 581 aaKnown RBP8.29□□□□□ -1.08
PUP2YGR253C BNI5P53890 448 aaKnown RBP8.29□□□□□ -1.08
PUP2YGR253C LCD1Q04377 747 aa8.29□□□□□ -1.08
PUP2YGR253C SRO9P25567 434 aaKnown RBP8.28□□□□□ -1.08
PUP2YGR253C APN2P38207 520 aa8.28□□□□□ -1.08
PUP2YGR253C ACF4P47129 309 aa8.28□□□□□ -1.08
PUP2YGR253C GIS4Q04233 774 aa8.28□□□□□ -1.08
PUP2YGR253C TIF1P10081 395 aaKnown RBP8.27□□□□□ -1.09
PUP2YGR253C SAS3P34218 831 aa8.27□□□□□ -1.09
PUP2YGR253C STB5P38699 743 aa8.27□□□□□ -1.09
PUP2YGR253C BUD16P39988 312 aa8.27□□□□□ -1.09
PUP2YGR253C PCI8P40512 444 aa8.27□□□□□ -1.09
PUP2YGR253C GPD2P41911 440 aaKnown RBP8.27□□□□□ -1.09
PUP2YGR253C ECM23Q02710 187 aa8.27□□□□□ -1.09
PUP2YGR253C AIM33Q04516 312 aa8.27□□□□□ -1.09
PUP2YGR253C RAD59Q12223 238 aa8.27□□□□□ -1.09
PUP2YGR253C EFT1P32324 842 aaKnown RBP8.26□□□□□ -1.09
PUP2YGR253C PGM1P33401 570 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms