RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	DEF1	P35732	738 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	IRS4	P36115	615 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	AMN1	P38285	549 aa	Predicted RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	SAP185	P40856	1058 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	ERR3	P42222	437 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	NPY1	P53164	384 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	HEH2	Q03281	663 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	UTP4	Q06679	776 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	PRT1	P06103	763 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	AAD3	P25612	363 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	IMP2'	P32351	346 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
PTR3	YFR029W	TYS1	P36421	394 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	BAP2	P38084	609 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	GDH3	P39708	457 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	MAM1	P40065	302 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	KRE33	P53914	1056 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	YDR341C	Q05506	607 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	HEL2	Q05580	639 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	EAF1	Q06337	982 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	DBP10	Q12389	995 aa	Known RBP	4.75	□□□□□ -1.65
PTR3	YFR029W	SBP1	P10080	294 aa	Known RBP	4.74	□□□□□ -1.65
PTR3	YFR029W	KCC4	P25389	1037 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	DPH2	P32461	534 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	ABD1	P32783	436 aa	Predicted RBP	4.74	□□□□□ -1.65
PTR3	YFR029W	VBA5	P36172	582 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	NOP4	P37838	685 aa	Known RBP	4.74	□□□□□ -1.65
PTR3	YFR029W	CCT3	P39077	534 aa	Known RBP	4.74	□□□□□ -1.65
PTR3	YFR029W	VPS8	P39702	1274 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	IRR1	P40541	1150 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	SAP155	P43612	1002 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	UTP8	P53276	713 aa	Known RBP	4.74	□□□□□ -1.65
PTR3	YFR029W	MEP3	P53390	489 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	BUL2	Q03758	920 aa	Known RBP	4.74	□□□□□ -1.65
PTR3	YFR029W	MSH6	Q03834	1242 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	TSR2	Q06672	205 aa	Known RBP	4.74	□□□□□ -1.65
PTR3	YFR029W	WTM2	Q12206	467 aa		4.74	□□□□□ -1.65
PTR3	YFR029W	KRR1	P25586	316 aa	Predicted RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	ARE1	P25628	610 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	CHS3	P29465	1165 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	VMA8	P32610	256 aa	Known RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	CAJ1	P39101	391 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	NUT1	P53114	1132 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	SDA1	P53313	767 aa	Known RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	ERO1	Q03103	563 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	MTQ2	Q03920	221 aa	Predicted RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	TRP2	P00899	507 aa	Known RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	HSP82	P02829	709 aa	Known RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	SPS1	P08458	490 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	SPO16	P17122	198 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	NIC96	P34077	839 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	LDH1	P38139	375 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	MGS1	P40151	587 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	YML082W	Q04533	649 aa	Known RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	YLR257W	Q06146	321 aa	Known RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	SPN1	Q06505	410 aa	Predicted RBP	4.73	□□□□□ -1.65
PTR3	YFR029W	PSR2	Q07949	397 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	TRE2	Q08693	809 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	YPL191C	Q08930	360 aa		4.73	□□□□□ -1.65
PTR3	YFR029W	PTH2	P34222	208 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	YHR218W	P38899	603 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	SUM1	P46676	1062 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	ERP6	P53198	216 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	BNI4	P53858	892 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	TIM11	P81449	96 aa	Predicted RBP	4.72	□□□□□ -1.65
PTR3	YFR029W	VPS30	Q02948	557 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	CIA1	Q05583	330 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	NEW1	Q08972	1196 aa	Known RBP	4.72	□□□□□ -1.65
PTR3	YFR029W	TMA46	Q12000	345 aa	Known RBP	4.72	□□□□□ -1.65
PTR3	YFR029W	INO80	P53115	1489 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	MSS18	P08593	268 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	SBA1	P28707	216 aa	Known RBP	4.72	□□□□□ -1.65
PTR3	YFR029W	DAL3	P32459	195 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	MOT2	P34909	587 aa	Known RBP	4.72	□□□□□ -1.65
PTR3	YFR029W	QDR2	P40474	542 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	HIS6	P40545	261 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	XKS1	P42826	600 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	TRS130	Q03660	1102 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	HDA2	Q06629	674 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	PGC1	Q08959	321 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	MDM12	Q92328	271 aa		4.72	□□□□□ -1.65
PTR3	YFR029W	RPS31	P05759	152 aa	Known RBP	4.71	□□□□□ -1.66
PTR3	YFR029W	TOP3	P13099	656 aa		4.71	□□□□□ -1.66
PTR3	YFR029W	SEC23	P15303	768 aa	Known RBP	4.71	□□□□□ -1.66
PTR3	YFR029W	KAR2	P16474	682 aa	Known RBP	4.71	□□□□□ -1.66
PTR3	YFR029W	RPC31	P17890	251 aa		4.71	□□□□□ -1.66
PTR3	YFR029W	BEM3	P32873	1128 aa		4.71	□□□□□ -1.66
PTR3	YFR029W	SAS3	P34218	831 aa		4.71	□□□□□ -1.66
PTR3	YFR029W	RER2	P35196	286 aa		4.71	□□□□□ -1.66
PTR3	YFR029W	MRP8	P35719	219 aa		4.71	□□□□□ -1.66
PTR3	YFR029W	DYS1	P38791	387 aa		4.71	□□□□□ -1.66
PTR3	YFR029W	PBP1	P53297	722 aa	Known RBP	4.71	□□□□□ -1.66
PTR3	YFR029W	SNP1	Q00916	300 aa	Predicted RBP	4.71	□□□□□ -1.66
PTR3	YFR029W	MLC2	Q06580	163 aa		4.71	□□□□□ -1.66
PTR3	YFR029W	CLF1	Q12309	687 aa	Predicted RBP	4.71	□□□□□ -1.66
PTR3	YFR029W	DHR2	P36009	735 aa	Predicted RBP	4.7	□□□□□ -1.66
PTR3	YFR029W	BSD2	P38356	321 aa		4.7	□□□□□ -1.66
PTR3	YFR029W	BCD1	P38772	366 aa		4.7	□□□□□ -1.66
PTR3	YFR029W	DJP1	P40564	432 aa		4.7	□□□□□ -1.66
PTR3	YFR029W	HUL4	P40985	892 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 128.8 ms