RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeast

Gene LOC1, Length 615 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOC1	YFR001W	NSI1	Q12457	570 aa		4.96	□□□□□ -1.62
LOC1	YFR001W	YSC84	P32793	468 aa		4.95	□□□□□ -1.62
LOC1	YFR001W	AOS1	Q06624	347 aa		4.95	□□□□□ -1.62
LOC1	YFR001W	SPO21	Q12411	609 aa		4.95	□□□□□ -1.62
LOC1	YFR001W	SAM35	P14693	329 aa		4.94	□□□□□ -1.62
LOC1	YFR001W	ELM1	P32801	640 aa		4.94	□□□□□ -1.62
LOC1	YFR001W	MCM7	P38132	845 aa		4.94	□□□□□ -1.62
LOC1	YFR001W	YHL012W	P38709	493 aa		4.94	□□□□□ -1.62
LOC1	YFR001W	HNT2	P49775	206 aa		4.94	□□□□□ -1.62
LOC1	YFR001W	SDH1	Q00711	640 aa		4.94	□□□□□ -1.62
LOC1	YFR001W	YER152C	P10356	443 aa		4.93	□□□□□ -1.62
LOC1	YFR001W	INO1	P11986	533 aa		4.93	□□□□□ -1.62
LOC1	YFR001W	BAS1	P22035	811 aa		4.93	□□□□□ -1.62
LOC1	YFR001W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
LOC1	YFR001W	MOT2	P34909	587 aa	Known RBP	4.93	□□□□□ -1.62
LOC1	YFR001W	RPN3	P40016	523 aa	Known RBP	4.93	□□□□□ -1.62
LOC1	YFR001W	HOS3	Q02959	697 aa	Known RBP	4.93	□□□□□ -1.62
LOC1	YFR001W	SPO20	Q04359	397 aa		4.93	□□□□□ -1.62
LOC1	YFR001W	YLR225C	Q05948	407 aa	Known RBP	4.93	□□□□□ -1.62
LOC1	YFR001W	OPI10	Q08202	246 aa		4.93	□□□□□ -1.62
LOC1	YFR001W	PRI2	P20457	528 aa		4.92	□□□□□ -1.62
LOC1	YFR001W	SRO9	P25567	434 aa	Known RBP	4.92	□□□□□ -1.62
LOC1	YFR001W	MDL2	P33311	773 aa		4.92	□□□□□ -1.62
LOC1	YFR001W	TNA1	P53322	534 aa		4.92	□□□□□ -1.62
LOC1	YFR001W	SSY1	Q03770	852 aa		4.92	□□□□□ -1.62
LOC1	YFR001W	RCL1	Q08096	367 aa	Predicted RBP	4.92	□□□□□ -1.62
LOC1	YFR001W	FAL1	Q12099	399 aa	Known RBP	4.92	□□□□□ -1.62
LOC1	YFR001W	SNF5	P18480	905 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	ADP1	P25371	1049 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	PRO1	P32264	428 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	BAP2	P38084	609 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	PTC7	P38797	343 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	GTS1	P40956	396 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	ESC2	Q06340	456 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	GNT1	Q12096	491 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	YPL066W	Q12194	479 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	RKM4	Q12504	494 aa		4.91	□□□□□ -1.62
LOC1	YFR001W	COQ4	O13525	335 aa		4.9	□□□□□ -1.63
LOC1	YFR001W	AGP1	P25376	633 aa		4.9	□□□□□ -1.63
LOC1	YFR001W	ABD1	P32783	436 aa	Predicted RBP	4.9	□□□□□ -1.63
LOC1	YFR001W	LRG1	P35688	1017 aa		4.9	□□□□□ -1.63
LOC1	YFR001W	YKL069W	P36088	180 aa		4.9	□□□□□ -1.63
LOC1	YFR001W	KRI1	P42846	591 aa	Known RBP	4.9	□□□□□ -1.63
LOC1	YFR001W	YGL176C	P46945	554 aa		4.9	□□□□□ -1.63
LOC1	YFR001W	YKL107W	P34251	309 aa		4.89	□□□□□ -1.63
LOC1	YFR001W	RSC58	Q07979	502 aa		4.89	□□□□□ -1.63
LOC1	YFR001W	RPL11A	P0C0W9	174 aa	Known RBP	4.88	□□□□□ -1.63
LOC1	YFR001W	SBA1	P28707	216 aa	Known RBP	4.88	□□□□□ -1.63
LOC1	YFR001W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
LOC1	YFR001W	PNT1	P38969	423 aa		4.88	□□□□□ -1.63
LOC1	YFR001W	PIK1	P39104	1066 aa		4.88	□□□□□ -1.63
LOC1	YFR001W	YFL054C	P43549	646 aa		4.88	□□□□□ -1.63
LOC1	YFR001W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
LOC1	YFR001W	SPP382	Q06411	708 aa	Predicted RBP	4.88	□□□□□ -1.63
LOC1	YFR001W	WRS1	Q12109	432 aa	Known RBP	4.88	□□□□□ -1.63
LOC1	YFR001W	LPX1	Q12405	387 aa	Known RBP	4.88	□□□□□ -1.63
LOC1	YFR001W	RPL11B	Q3E757	174 aa	Predicted RBP	4.88	□□□□□ -1.63
LOC1	YFR001W	DBP2	P24783	546 aa	Known RBP	4.87	□□□□□ -1.63
LOC1	YFR001W	HSP78	P33416	811 aa		4.87	□□□□□ -1.63
LOC1	YFR001W	VBA5	P36172	582 aa		4.87	□□□□□ -1.63
LOC1	YFR001W	CCZ1	P38273	704 aa		4.87	□□□□□ -1.63
LOC1	YFR001W	SPF1	P39986	1215 aa	Known RBP	4.87	□□□□□ -1.63
LOC1	YFR001W	MXR1	P40029	184 aa		4.87	□□□□□ -1.63
LOC1	YFR001W	SIP5	P40210	489 aa	Known RBP	4.87	□□□□□ -1.63
LOC1	YFR001W	ORC3	P54790	616 aa		4.87	□□□□□ -1.63
LOC1	YFR001W	SHE9	Q04172	456 aa		4.87	□□□□□ -1.63
LOC1	YFR001W	NBA1	Q08229	501 aa	Known RBP	4.87	□□□□□ -1.63
LOC1	YFR001W	SSF2	Q12153	453 aa	Predicted RBP	4.87	□□□□□ -1.63
LOC1	YFR001W	RNQ1	P25367	405 aa		4.86	□□□□□ -1.63
LOC1	YFR001W	AIM26	P32858	118 aa		4.86	□□□□□ -1.63
LOC1	YFR001W	SEG2	P34250	1132 aa		4.86	□□□□□ -1.63
LOC1	YFR001W	POL12	P38121	705 aa	Predicted RBP	4.86	□□□□□ -1.63
LOC1	YFR001W	SNF7	P39929	240 aa	Known RBP	4.86	□□□□□ -1.63
LOC1	YFR001W	ECL1	P48235	211 aa		4.86	□□□□□ -1.63
LOC1	YFR001W	TDA5	Q06417	326 aa	Known RBP	4.86	□□□□□ -1.63
LOC1	YFR001W	DFG16	Q99234	619 aa		4.86	□□□□□ -1.63
LOC1	YFR001W	GRX1	P25373	110 aa	Known RBP	4.85	□□□□□ -1.63
LOC1	YFR001W	MBP1	P39678	833 aa		4.85	□□□□□ -1.63
LOC1	YFR001W	GEM1	P39722	662 aa		4.85	□□□□□ -1.63
LOC1	YFR001W	RSB1	Q08417	382 aa		4.85	□□□□□ -1.63
LOC1	YFR001W	MRP8	P35719	219 aa		4.84	□□□□□ -1.63
LOC1	YFR001W	ACM1	Q08981	209 aa		4.84	□□□□□ -1.63
LOC1	YFR001W	SPS1	P08458	490 aa		4.83	□□□□□ -1.64
LOC1	YFR001W	SLA2	P33338	968 aa		4.83	□□□□□ -1.64
LOC1	YFR001W	UGA2	P38067	497 aa		4.83	□□□□□ -1.64
LOC1	YFR001W	TAT2	P38967	592 aa		4.83	□□□□□ -1.64
LOC1	YFR001W	UBP5	P39944	805 aa		4.83	□□□□□ -1.64
LOC1	YFR001W	NIT1	P40447	199 aa		4.83	□□□□□ -1.64
LOC1	YFR001W	STE5	P32917	917 aa		4.82	□□□□□ -1.64
LOC1	YFR001W	ABZ1	P37254	787 aa	Predicted RBP	4.82	□□□□□ -1.64
LOC1	YFR001W	YBR184W	P38299	523 aa		4.82	□□□□□ -1.64
LOC1	YFR001W	SEC26	P41810	973 aa	Known RBP	4.82	□□□□□ -1.64
LOC1	YFR001W	NNF1	P47149	201 aa		4.82	□□□□□ -1.64
LOC1	YFR001W	FOL2	P51601	243 aa	Known RBP	4.82	□□□□□ -1.64
LOC1	YFR001W	THS1	P04801	734 aa	Known RBP	4.81	□□□□□ -1.64
LOC1	YFR001W	PBY1	P38254	753 aa		4.81	□□□□□ -1.64
LOC1	YFR001W	IRR1	P40541	1150 aa		4.81	□□□□□ -1.64
LOC1	YFR001W	ATG13	Q06628	738 aa		4.81	□□□□□ -1.64
LOC1	YFR001W	BI4	P03879	638 aa		4.8	□□□□□ -1.64
LOC1	YFR001W	TSA1	P34760	196 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms