RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W UBX2Q04228 584 aa5.53□□□□□ -1.52
CDC4YFL009W VMS1Q04311 632 aaKnown RBP5.53□□□□□ -1.52
CDC4YFL009W DDP1Q99321 188 aaKnown RBP5.53□□□□□ -1.52
CDC4YFL009W MRPL33P20084 86 aa5.52□□□□□ -1.53
CDC4YFL009W DAK2P43550 591 aa5.52□□□□□ -1.53
CDC4YFL009W ENT3P47160 408 aa5.52□□□□□ -1.53
CDC4YFL009W CLA4P48562 842 aa5.52□□□□□ -1.53
CDC4YFL009W SPO19Q03029 223 aa5.52□□□□□ -1.53
CDC4YFL009W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
CDC4YFL009W SWI1P09547 1314 aa5.52□□□□□ -1.53
CDC4YFL009W GPA1P08539 472 aa5.52□□□□□ -1.53
CDC4YFL009W MRF1P30775 413 aaPredicted RBP5.52□□□□□ -1.53
CDC4YFL009W AKL1P38080 1108 aaKnown RBP5.52□□□□□ -1.53
CDC4YFL009W RGD1P38339 666 aa5.52□□□□□ -1.53
CDC4YFL009W MPH1P40562 993 aa5.52□□□□□ -1.53
CDC4YFL009W TFG2P41896 400 aaPredicted RBP5.52□□□□□ -1.53
CDC4YFL009W SMC6Q12749 1114 aa5.52□□□□□ -1.53
CDC4YFL009W MCM1P11746 286 aa5.51□□□□□ -1.53
CDC4YFL009W DPB3P27344 201 aa5.51□□□□□ -1.53
CDC4YFL009W CDC11P32458 415 aa5.51□□□□□ -1.53
CDC4YFL009W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
CDC4YFL009W VRP1P37370 817 aa5.51□□□□□ -1.53
CDC4YFL009W PCH2P38126 564 aa5.51□□□□□ -1.53
CDC4YFL009W SPR3P41901 512 aa5.51□□□□□ -1.53
CDC4YFL009W CTF18P49956 741 aa5.51□□□□□ -1.53
CDC4YFL009W YGR122WP53272 402 aa5.51□□□□□ -1.53
CDC4YFL009W RMD1Q03441 430 aa5.51□□□□□ -1.53
CDC4YFL009W RBA50Q04418 439 aa5.51□□□□□ -1.53
CDC4YFL009W SPR28Q04921 423 aa5.51□□□□□ -1.53
CDC4YFL009W EIS1Q05050 843 aaKnown RBP5.51□□□□□ -1.53
CDC4YFL009W LEU2P04173 364 aaPredicted RBP5.51□□□□□ -1.53
CDC4YFL009W RDS1P25611 832 aa5.51□□□□□ -1.53
CDC4YFL009W YEL043WP32618 956 aa5.51□□□□□ -1.53
CDC4YFL009W TOA1P32773 286 aa5.51□□□□□ -1.53
CDC4YFL009W YME2P32843 850 aa5.51□□□□□ -1.53
CDC4YFL009W EXO84P38261 753 aa5.51□□□□□ -1.53
CDC4YFL009W RRM3P38766 723 aa5.51□□□□□ -1.53
CDC4YFL009W YER130CP39959 443 aa5.51□□□□□ -1.53
CDC4YFL009W UTP7P40055 554 aaKnown RBP5.51□□□□□ -1.53
CDC4YFL009W PEA2P40091 420 aa5.51□□□□□ -1.53
CDC4YFL009W WAR1Q03631 944 aa5.51□□□□□ -1.53
CDC4YFL009W NFI1Q12216 726 aa5.51□□□□□ -1.53
CDC4YFL009W TY4B-PA0A0B7P3V8 1104 aa5.5□□□□□ -1.53
CDC4YFL009W RPL5P26321 297 aaKnown RBP5.5□□□□□ -1.53
CDC4YFL009W GCD7P32502 381 aaPredicted RBP5.5□□□□□ -1.53
CDC4YFL009W YSW1P38280 609 aa5.5□□□□□ -1.53
CDC4YFL009W SPT8P38915 602 aa5.5□□□□□ -1.53
CDC4YFL009W SUM1P46676 1062 aa5.5□□□□□ -1.53
CDC4YFL009W SLP1Q12232 587 aa5.5□□□□□ -1.53
CDC4YFL009W TY4A-HQ6Q5P6 413 aa5.5□□□□□ -1.53
CDC4YFL009W RPO41P13433 1351 aaKnown RBP5.5□□□□□ -1.53
CDC4YFL009W CPA2P03965 1118 aaKnown RBP5.49□□□□□ -1.53
CDC4YFL009W DAT1P13483 248 aaKnown RBP5.49□□□□□ -1.53
CDC4YFL009W RAD24P32641 659 aa5.49□□□□□ -1.53
CDC4YFL009W AAP1P37898 856 aaKnown RBP5.49□□□□□ -1.53
CDC4YFL009W RFC5P38251 354 aa5.49□□□□□ -1.53
CDC4YFL009W MAM1P40065 302 aa5.49□□□□□ -1.53
CDC4YFL009W SEC26P41810 973 aaKnown RBP5.49□□□□□ -1.53
CDC4YFL009W YJL171CP46992 396 aa5.49□□□□□ -1.53
CDC4YFL009W ILM1P47155 203 aa5.49□□□□□ -1.53
CDC4YFL009W YGL242CP53066 181 aa5.49□□□□□ -1.53
CDC4YFL009W VTC3Q02725 835 aa5.49□□□□□ -1.53
CDC4YFL009W STE23Q06010 1027 aa5.49□□□□□ -1.53
CDC4YFL009W ARR1Q06596 294 aa5.49□□□□□ -1.53
CDC4YFL009W APL4Q12028 832 aa5.49□□□□□ -1.53
CDC4YFL009W MET32Q12041 191 aa5.49□□□□□ -1.53
CDC4YFL009W RPO26P20435 155 aa5.49□□□□□ -1.53
CDC4YFL009W REI1P38344 393 aaPredicted RBP5.49□□□□□ -1.53
CDC4YFL009W NOC2P39744 710 aaKnown RBP5.49□□□□□ -1.53
CDC4YFL009W SVF1Q05515 481 aa5.49□□□□□ -1.53
CDC4YFL009W LCB5Q06147 687 aaKnown RBP5.49□□□□□ -1.53
CDC4YFL009W CMS1Q07897 291 aaKnown RBP5.49□□□□□ -1.53
CDC4YFL009W RIM20Q12033 661 aa5.49□□□□□ -1.53
CDC4YFL009W RPS31P05759 152 aaKnown RBP5.48□□□□□ -1.53
CDC4YFL009W VMA3P25515 160 aa5.48□□□□□ -1.53
CDC4YFL009W RPT1P33299 467 aaKnown RBP5.48□□□□□ -1.53
CDC4YFL009W PET100P38958 111 aa5.48□□□□□ -1.53
CDC4YFL009W CCT4P39078 528 aaKnown RBP5.48□□□□□ -1.53
CDC4YFL009W PXA1P41909 870 aa5.48□□□□□ -1.53
CDC4YFL009W NCS2P53923 493 aaPredicted RBP5.48□□□□□ -1.53
CDC4YFL009W HOT1Q03213 719 aa5.48□□□□□ -1.53
CDC4YFL009W ARO80Q04052 950 aa5.48□□□□□ -1.53
CDC4YFL009W GGA1Q06336 557 aa5.48□□□□□ -1.53
CDC4YFL009W YCG1Q06680 1035 aa5.48□□□□□ -1.53
CDC4YFL009W UBC1P21734 215 aaKnown RBP5.48□□□□□ -1.53
CDC4YFL009W CDC15P27636 974 aa5.48□□□□□ -1.53
CDC4YFL009W SRP40P32583 406 aaPredicted RBP5.48□□□□□ -1.53
CDC4YFL009W NFU1P32860 256 aa5.48□□□□□ -1.53
CDC4YFL009W HEL1P36113 551 aa5.48□□□□□ -1.53
CDC4YFL009W TOM71P38825 639 aaKnown RBP5.48□□□□□ -1.53
CDC4YFL009W NAB3P38996 802 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
CDC4YFL009W APT1P49435 187 aaKnown RBP5.48□□□□□ -1.53
CDC4YFL009W SUT1P53032 299 aaKnown RBP5.48□□□□□ -1.53
CDC4YFL009W YDR338CQ05497 695 aa5.48□□□□□ -1.53
CDC4YFL009W AOS1Q06624 347 aa5.48□□□□□ -1.53
CDC4YFL009W CDC37P06101 506 aaKnown RBP5.47□□□□□ -1.53
CDC4YFL009W PRP16P15938 1071 aaPredicted RBP5.47□□□□□ -1.53
CDC4YFL009W CDC10P25342 322 aaKnown RBP5.47□□□□□ -1.53
CDC4YFL009W RRP43P25359 394 aaPredicted RBP5.47□□□□□ -1.53
CDC4YFL009W GSY2P27472 705 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms