RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W BUD21Q08492 214 aaPredicted RBP6.31□□□□□ -1.4
UBC6YER100W GNT1Q12096 491 aa6.31□□□□□ -1.4
UBC6YER100W DED1P06634 604 aaKnown RBP6.3□□□□□ -1.4
UBC6YER100W AFG2P32794 780 aa6.3□□□□□ -1.4
UBC6YER100W VPS24P36095 224 aaKnown RBP6.3□□□□□ -1.4
UBC6YER100W SIP5P40210 489 aaKnown RBP6.3□□□□□ -1.4
UBC6YER100W SLS1P42900 643 aa6.3□□□□□ -1.4
UBC6YER100W UBP6P43593 499 aaKnown RBP6.3□□□□□ -1.4
UBC6YER100W HAS1Q03532 505 aaKnown RBP6.3□□□□□ -1.4
UBC6YER100W TMA17Q12513 150 aa6.3□□□□□ -1.4
UBC6YER100W GSY1P23337 708 aa6.29□□□□□ -1.4
UBC6YER100W GAR1P28007 205 aaKnown RBP6.29□□□□□ -1.4
UBC6YER100W DOM34P33309 386 aa6.29□□□□□ -1.4
UBC6YER100W MCM7P38132 845 aa6.29□□□□□ -1.4
UBC6YER100W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
UBC6YER100W UME1Q03010 460 aa6.29□□□□□ -1.4
UBC6YER100W THI73Q07904 523 aa6.29□□□□□ -1.4
UBC6YER100W NUP145P49687 1317 aa6.28□□□□□ -1.4
UBC6YER100W ATP4P05626 244 aa6.28□□□□□ -1.4
UBC6YER100W TOM70P07213 617 aaKnown RBP6.28□□□□□ -1.4
UBC6YER100W MEF1P25039 761 aa6.28□□□□□ -1.4
UBC6YER100W YEL1P34225 687 aa6.28□□□□□ -1.4
UBC6YER100W PET10P36139 283 aa6.28□□□□□ -1.4
UBC6YER100W GCV1P48015 400 aa6.28□□□□□ -1.4
UBC6YER100W GPG1P53130 126 aa6.28□□□□□ -1.4
UBC6YER100W MEC3Q02574 474 aa6.28□□□□□ -1.4
UBC6YER100W SPO71Q03868 1245 aa6.28□□□□□ -1.4
UBC6YER100W TMA7Q3E764 64 aaKnown RBP6.28□□□□□ -1.4
UBC6YER100W TOP3P13099 656 aa6.27□□□□□ -1.41
UBC6YER100W ALG3P38179 458 aa6.27□□□□□ -1.41
UBC6YER100W MGS1P40151 587 aa6.27□□□□□ -1.41
UBC6YER100W PRK1P40494 810 aa6.27□□□□□ -1.41
UBC6YER100W YOR378WQ08902 515 aa6.27□□□□□ -1.41
UBC6YER100W DPB3P27344 201 aa6.26□□□□□ -1.41
UBC6YER100W ATG14P38270 344 aa6.26□□□□□ -1.41
UBC6YER100W OSH7P38755 437 aa6.26□□□□□ -1.41
UBC6YER100W PAN5P38787 379 aa6.26□□□□□ -1.41
UBC6YER100W VMS1Q04311 632 aaKnown RBP6.26□□□□□ -1.41
UBC6YER100W SLX4Q12098 748 aa6.26□□□□□ -1.41
UBC6YER100W KAR1P11927 433 aa6.25□□□□□ -1.41
UBC6YER100W MSD1P15179 658 aaKnown RBP6.25□□□□□ -1.41
UBC6YER100W DIT1P21623 536 aa6.25□□□□□ -1.41
UBC6YER100W SEC26P41810 973 aaKnown RBP6.25□□□□□ -1.41
UBC6YER100W VPS53P47061 822 aa6.25□□□□□ -1.41
UBC6YER100W SDA1P53313 767 aaKnown RBP6.25□□□□□ -1.41
UBC6YER100W ALO1P54783 526 aaKnown RBP6.25□□□□□ -1.41
UBC6YER100W YLR346CQ06139 101 aa6.25□□□□□ -1.41
UBC6YER100W MRP10O75012 95 aa6.24□□□□□ -1.41
UBC6YER100W MLS1P30952 554 aa6.24□□□□□ -1.41
UBC6YER100W GLY1P37303 387 aaKnown RBP6.24□□□□□ -1.41
UBC6YER100W YBR071WP38243 211 aa6.24□□□□□ -1.41
UBC6YER100W PNT1P38969 423 aa6.24□□□□□ -1.41
UBC6YER100W DSS1P39112 969 aa6.24□□□□□ -1.41
UBC6YER100W NEO1P40527 1151 aa6.24□□□□□ -1.41
UBC6YER100W ALG2P43636 503 aa6.24□□□□□ -1.41
UBC6YER100W HFD1Q04458 532 aa6.24□□□□□ -1.41
UBC6YER100W COG8Q04632 607 aa6.24□□□□□ -1.41
UBC6YER100W YDR306CQ06640 478 aa6.24□□□□□ -1.41
UBC6YER100W YPL260WQ08977 551 aa6.24□□□□□ -1.41
UBC6YER100W LAP2Q10740 671 aa6.24□□□□□ -1.41
UBC6YER100W FAP7Q12055 197 aaPredicted RBP6.24□□□□□ -1.41
UBC6YER100W PTC5Q12511 572 aa6.24□□□□□ -1.41
UBC6YER100W YDR461C-AQ2V2P7 80 aa6.24□□□□□ -1.41
UBC6YER100W RAD53P22216 821 aa6.23□□□□□ -1.41
UBC6YER100W VBA3P25594 458 aa6.23□□□□□ -1.41
UBC6YER100W AAR2P32357 355 aaPredicted RBP6.23□□□□□ -1.41
UBC6YER100W BRE2P43132 505 aa6.23□□□□□ -1.41
UBC6YER100W YJR120WP47157 116 aa6.23□□□□□ -1.41
UBC6YER100W COG6P53959 839 aa6.23□□□□□ -1.41
UBC6YER100W NAM8Q00539 523 aaKnown RBP6.23□□□□□ -1.41
UBC6YER100W BUL2Q03758 920 aaKnown RBP6.23□□□□□ -1.41
UBC6YER100W TY1A-DR2Q03964 440 aaKnown RBP6.23□□□□□ -1.41
UBC6YER100W SPP382Q06411 708 aaPredicted RBP6.23□□□□□ -1.41
UBC6YER100W YLL054CQ12244 843 aa6.23□□□□□ -1.41
UBC6YER100W FPS1P23900 669 aa6.22□□□□□ -1.41
UBC6YER100W GBP2P25555 427 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
UBC6YER100W TRZ1P36159 838 aaPredicted RBP6.22□□□□□ -1.41
UBC6YER100W YBR284WP38150 797 aa6.22□□□□□ -1.41
UBC6YER100W FUI1P38196 639 aa6.22□□□□□ -1.41
UBC6YER100W HSE1P38753 452 aa6.22□□□□□ -1.41
UBC6YER100W YAR028WP39548 234 aa6.22□□□□□ -1.41
UBC6YER100W NIT1P40447 199 aa6.22□□□□□ -1.41
UBC6YER100W LCD1Q04377 747 aa6.22□□□□□ -1.41
UBC6YER100W SLP1Q12232 587 aa6.22□□□□□ -1.41
UBC6YER100W ADE8P04161 214 aa6.21□□□□□ -1.42
UBC6YER100W SRD1P09007 221 aa6.21□□□□□ -1.42
UBC6YER100W EUG1P32474 517 aa6.21□□□□□ -1.42
UBC6YER100W SPC29P33419 253 aa6.21□□□□□ -1.42
UBC6YER100W TYS1P36421 394 aaKnown RBP6.21□□□□□ -1.42
UBC6YER100W BAP2P38084 609 aa6.21□□□□□ -1.42
UBC6YER100W REI1P38344 393 aaPredicted RBP6.21□□□□□ -1.42
UBC6YER100W GPP1P41277 250 aaKnown RBP6.21□□□□□ -1.42
UBC6YER100W LCB5Q06147 687 aaKnown RBP6.21□□□□□ -1.42
UBC6YER100W YDL121CQ07541 149 aa6.21□□□□□ -1.42
UBC6YER100W TRE2Q08693 809 aa6.21□□□□□ -1.42
UBC6YER100W THS1P04801 734 aaKnown RBP6.2□□□□□ -1.42
UBC6YER100W PPH3P32345 308 aa6.2□□□□□ -1.42
UBC6YER100W CDC12P32468 407 aaKnown RBP6.2□□□□□ -1.42
UBC6YER100W PEA2P40091 420 aa6.2□□□□□ -1.42
UBC6YER100W SPO74P45819 413 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms