RNA–Protein interactions for RNA: YER032W

FIR1, Transcript of Protein involved in 3' mRNA processing, yeast

Gene FIR1, Length 2,631 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIR1	YER032W	ISU1	Q03020	165 aa		3	□□□□□ -1.93
FIR1	YER032W	RCF1	Q03713	159 aa		3	□□□□□ -1.93
FIR1	YER032W	IMH1	Q06704	911 aa	Known RBP	3	□□□□□ -1.93
FIR1	YER032W	OPY2	Q06810	360 aa		3	□□□□□ -1.93
FIR1	YER032W	MED1	Q12321	566 aa		3	□□□□□ -1.93
FIR1	YER032W	HOM3	P10869	527 aa		2.99	□□□□□ -1.93
FIR1	YER032W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
FIR1	YER032W	TPD3	P31383	635 aa		2.99	□□□□□ -1.93
FIR1	YER032W	SCT1	P32784	759 aa		2.99	□□□□□ -1.93
FIR1	YER032W	DUG1	P43616	481 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	NUT1	P53114	1132 aa		2.99	□□□□□ -1.93
FIR1	YER032W	ERO1	Q03103	563 aa		2.99	□□□□□ -1.93
FIR1	YER032W	UTP4	Q06679	776 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	YDR056C	Q12025	205 aa		2.99	□□□□□ -1.93
FIR1	YER032W	SPT7	P35177	1332 aa		2.99	□□□□□ -1.93
FIR1	YER032W	RPP2B	P02400	110 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	HSP82	P02829	709 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	PHO81	P17442	1178 aa		2.99	□□□□□ -1.93
FIR1	YER032W	CHL1	P22516	861 aa	Predicted RBP	2.99	□□□□□ -1.93
FIR1	YER032W	PAT1	P25644	796 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	CDC60	P26637	1090 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	PRP19	P32523	503 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	ANP1	P32629	500 aa		2.99	□□□□□ -1.93
FIR1	YER032W	MOT2	P34909	587 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	RER2	P35196	286 aa		2.99	□□□□□ -1.93
FIR1	YER032W	NUP120	P35729	1037 aa		2.99	□□□□□ -1.93
FIR1	YER032W	KTR4	P38131	464 aa		2.99	□□□□□ -1.93
FIR1	YER032W	RVS167	P39743	482 aa	Known RBP	2.99	□□□□□ -1.93
FIR1	YER032W	HIS6	P40545	261 aa		2.99	□□□□□ -1.93
FIR1	YER032W	SIW14	P53965	281 aa		2.99	□□□□□ -1.93
FIR1	YER032W	VPS30	Q02948	557 aa		2.99	□□□□□ -1.93
FIR1	YER032W	JIP4	Q03361	876 aa		2.99	□□□□□ -1.93
FIR1	YER032W	PML39	Q03760	334 aa		2.99	□□□□□ -1.93
FIR1	YER032W	MSH6	Q03834	1242 aa		2.99	□□□□□ -1.93
FIR1	YER032W	PHM6	Q05637	104 aa		2.99	□□□□□ -1.93
FIR1	YER032W	YPQ2	Q06328	317 aa		2.99	□□□□□ -1.93
FIR1	YER032W	HDA2	Q06629	674 aa		2.99	□□□□□ -1.93
FIR1	YER032W	HBN1	Q96VH4	193 aa		2.99	□□□□□ -1.93
FIR1	YER032W	CYB2	P00175	591 aa		2.98	□□□□□ -1.93
FIR1	YER032W	INO1	P11986	533 aa		2.98	□□□□□ -1.93
FIR1	YER032W	SEC23	P15303	768 aa	Known RBP	2.98	□□□□□ -1.93
FIR1	YER032W	MSM1	P22438	575 aa		2.98	□□□□□ -1.93
FIR1	YER032W	BRF1	P29056	596 aa		2.98	□□□□□ -1.93
FIR1	YER032W	VPH1	P32563	840 aa	Known RBP	2.98	□□□□□ -1.93
FIR1	YER032W	FBP26	P32604	452 aa		2.98	□□□□□ -1.93
FIR1	YER032W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
FIR1	YER032W	SAS3	P34218	831 aa		2.98	□□□□□ -1.93
FIR1	YER032W	AMN1	P38285	549 aa	Predicted RBP	2.98	□□□□□ -1.93
FIR1	YER032W	GPP2	P40106	250 aa	Known RBP	2.98	□□□□□ -1.93
FIR1	YER032W	RRN7	P40992	514 aa		2.98	□□□□□ -1.93
FIR1	YER032W	BNA1	P47096	177 aa		2.98	□□□□□ -1.93
FIR1	YER032W	YNL035C	P53962	389 aa	Known RBP	2.98	□□□□□ -1.93
FIR1	YER032W	TOP3	P13099	656 aa		2.98	□□□□□ -1.93
FIR1	YER032W	PXA2	P34230	853 aa		2.98	□□□□□ -1.93
FIR1	YER032W	PEX28	P38848	579 aa		2.98	□□□□□ -1.93
FIR1	YER032W	ACA1	P39970	489 aa		2.98	□□□□□ -1.93
FIR1	YER032W	QDR2	P40474	542 aa		2.98	□□□□□ -1.93
FIR1	YER032W	NIT2	P47016	307 aa		2.98	□□□□□ -1.93
FIR1	YER032W	ENT3	P47160	408 aa		2.98	□□□□□ -1.93
FIR1	YER032W	SRP1	Q02821	542 aa	Known RBP	2.98	□□□□□ -1.93
FIR1	YER032W	SRC1	Q03707	834 aa		2.98	□□□□□ -1.93
FIR1	YER032W	PMT7	Q06644	662 aa		2.98	□□□□□ -1.93
FIR1	YER032W	YTM1	Q12024	460 aa	Predicted RBP	2.98	□□□□□ -1.93
FIR1	YER032W	SRD1	P09007	221 aa		2.97	□□□□□ -1.93
FIR1	YER032W	RAD53	P22216	821 aa		2.97	□□□□□ -1.93
FIR1	YER032W	SMY2	P32909	740 aa	Known RBP	2.97	□□□□□ -1.93
FIR1	YER032W	YEL1	P34225	687 aa		2.97	□□□□□ -1.93
FIR1	YER032W	YKL107W	P34251	309 aa		2.97	□□□□□ -1.93
FIR1	YER032W	RKM3	P38222	552 aa		2.97	□□□□□ -1.93
FIR1	YER032W	APM2	P38700	605 aa		2.97	□□□□□ -1.93
FIR1	YER032W	XDJ1	P39102	459 aa		2.97	□□□□□ -1.93
FIR1	YER032W	PES4	P39684	611 aa		2.97	□□□□□ -1.93
FIR1	YER032W	HXT13	P39924	564 aa		2.97	□□□□□ -1.93
FIR1	YER032W	SAH1	P39954	449 aa	Known RBP	2.97	□□□□□ -1.93
FIR1	YER032W	UBP6	P43593	499 aa	Known RBP	2.97	□□□□□ -1.93
FIR1	YER032W	YJR096W	P47137	282 aa		2.97	□□□□□ -1.93
FIR1	YER032W	HOS2	P53096	452 aa	Predicted RBP	2.97	□□□□□ -1.93
FIR1	YER032W	HOL1	P53389	586 aa		2.97	□□□□□ -1.93
FIR1	YER032W	HXT17	P53631	564 aa		2.97	□□□□□ -1.93
FIR1	YER032W	CAF120	P53836	1060 aa		2.97	□□□□□ -1.93
FIR1	YER032W	APP1	P53933	587 aa		2.97	□□□□□ -1.93
FIR1	YER032W	HXT15	P54854	567 aa		2.97	□□□□□ -1.93
FIR1	YER032W	GTR1	Q00582	310 aa		2.97	□□□□□ -1.93
FIR1	YER032W	IRC3	Q06683	689 aa		2.97	□□□□□ -1.93
FIR1	YER032W	CLF1	Q12309	687 aa	Predicted RBP	2.97	□□□□□ -1.93
FIR1	YER032W	RKM4	Q12504	494 aa		2.97	□□□□□ -1.93
FIR1	YER032W	RMP1	Q12530	201 aa		2.97	□□□□□ -1.93
FIR1	YER032W	TY1B-A	O13527	1196 aa	Known RBP	2.97	□□□□□ -1.93
FIR1	YER032W	COB	P00163	385 aa		2.97	□□□□□ -1.93
FIR1	YER032W	RAD18	P10862	487 aa		2.97	□□□□□ -1.93
FIR1	YER032W	MRF1	P30775	413 aa	Predicted RBP	2.97	□□□□□ -1.93
FIR1	YER032W	VMA8	P32610	256 aa	Known RBP	2.97	□□□□□ -1.93
FIR1	YER032W	HBS1	P32769	611 aa	Known RBP	2.97	□□□□□ -1.93
FIR1	YER032W	DOM34	P33309	386 aa		2.97	□□□□□ -1.93
FIR1	YER032W	ABZ1	P37254	787 aa	Predicted RBP	2.97	□□□□□ -1.93
FIR1	YER032W	VPS8	P39702	1274 aa		2.97	□□□□□ -1.93
FIR1	YER032W	OAF1	P39720	1047 aa	Predicted RBP	2.97	□□□□□ -1.93
FIR1	YER032W	SGM1	P47166	707 aa		2.97	□□□□□ -1.93
FIR1	YER032W	GPI8	P49018	411 aa		2.97	□□□□□ -1.93
FIR1	YER032W	YGL140C	P53120	1219 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 80.8 ms