RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SEC8P32855 1065 aa5.71□□□□□ -1.5
PRE1YER012W MGE1P38523 228 aa5.71□□□□□ -1.5
PRE1YER012W HXT13P39924 564 aa5.71□□□□□ -1.5
PRE1YER012W TNA1P53322 534 aa5.71□□□□□ -1.5
PRE1YER012W HXT17P53631 564 aa5.71□□□□□ -1.5
PRE1YER012W SNO2P53823 222 aa5.71□□□□□ -1.5
PRE1YER012W HXT15P54854 567 aa5.71□□□□□ -1.5
PRE1YER012W NBA1Q08229 501 aaKnown RBP5.71□□□□□ -1.5
PRE1YER012W SNF5P18480 905 aa5.7□□□□□ -1.5
PRE1YER012W ABZ1P37254 787 aaPredicted RBP5.7□□□□□ -1.5
PRE1YER012W GNP1P48813 663 aa5.7□□□□□ -1.5
PRE1YER012W RIM8P53179 542 aa5.7□□□□□ -1.5
PRE1YER012W SIW14P53965 281 aa5.7□□□□□ -1.5
PRE1YER012W RSB1Q08417 382 aa5.7□□□□□ -1.5
PRE1YER012W MLS1P30952 554 aa5.69□□□□□ -1.5
PRE1YER012W PEP7P32609 515 aa5.69□□□□□ -1.5
PRE1YER012W CCZ1P38273 704 aa5.69□□□□□ -1.5
PRE1YER012W ROT1Q03691 256 aa5.69□□□□□ -1.5
PRE1YER012W CYC1P00044 109 aaPredicted RBP5.68□□□□□ -1.5
PRE1YER012W YER152CP10356 443 aa5.68□□□□□ -1.5
PRE1YER012W BAP2P38084 609 aa5.68□□□□□ -1.5
PRE1YER012W RRP15Q06511 250 aaPredicted RBP5.68□□□□□ -1.5
PRE1YER012W SOD2P00447 233 aa5.67□□□□□ -1.5
PRE1YER012W YJR107WP47145 328 aa5.67□□□□□ -1.5
PRE1YER012W YPL260WQ08977 551 aa5.67□□□□□ -1.5
PRE1YER012W TAF13P11747 167 aa5.66□□□□□ -1.5
PRE1YER012W SYP1P25623 870 aaKnown RBP5.66□□□□□ -1.5
PRE1YER012W PUF4P25339 888 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
PRE1YER012W PIK1P39104 1066 aa5.65□□□□□ -1.5
PRE1YER012W SEC26P41810 973 aaKnown RBP5.65□□□□□ -1.5
PRE1YER012W SPT20P50875 604 aa5.65□□□□□ -1.5
PRE1YER012W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
PRE1YER012W PLB2Q03674 706 aa5.65□□□□□ -1.5
PRE1YER012W YOR352WQ08816 343 aa5.65□□□□□ -1.5
PRE1YER012W LAM1P38851 1228 aa5.64□□□□□ -1.51
PRE1YER012W CNN1P43618 361 aa5.64□□□□□ -1.51
PRE1YER012W SGD1Q06132 899 aa5.64□□□□□ -1.51
PRE1YER012W CMP2P14747 604 aa5.63□□□□□ -1.51
PRE1YER012W RER2P35196 286 aa5.63□□□□□ -1.51
PRE1YER012W MCM7P38132 845 aa5.63□□□□□ -1.51
PRE1YER012W RGD1P38339 666 aa5.63□□□□□ -1.51
PRE1YER012W RPN3P40016 523 aaKnown RBP5.63□□□□□ -1.51
PRE1YER012W GAL10P04397 699 aa5.62□□□□□ -1.51
PRE1YER012W DBP5P20449 482 aaKnown RBP5.62□□□□□ -1.51
PRE1YER012W MEF2P39677 819 aa5.62□□□□□ -1.51
PRE1YER012W MXR1P40029 184 aa5.62□□□□□ -1.51
PRE1YER012W OYE2Q03558 400 aaKnown RBP5.62□□□□□ -1.51
PRE1YER012W YDR132CQ03900 495 aa5.62□□□□□ -1.51
PRE1YER012W RIB2Q12362 591 aaKnown RBP5.62□□□□□ -1.51
PRE1YER012W SRM1P21827 482 aa5.61□□□□□ -1.51
PRE1YER012W MPH1P40562 993 aa5.61□□□□□ -1.51
PRE1YER012W GCN5Q03330 439 aa5.61□□□□□ -1.51
PRE1YER012W TIF35Q04067 274 aaKnown RBP5.61□□□□□ -1.51
PRE1YER012W NOP8Q08287 484 aaPredicted RBP5.61□□□□□ -1.51
PRE1YER012W RFC5P38251 354 aa5.6□□□□□ -1.51
PRE1YER012W RSM24Q03976 319 aa5.6□□□□□ -1.51
PRE1YER012W ESF1Q06344 628 aaKnown RBP5.6□□□□□ -1.51
PRE1YER012W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
PRE1YER012W SVS1Q12254 260 aa5.6□□□□□ -1.51
PRE1YER012W BAS1P22035 811 aa5.59□□□□□ -1.51
PRE1YER012W MOT2P34909 587 aaKnown RBP5.59□□□□□ -1.51
PRE1YER012W RTT10Q08924 1013 aa5.59□□□□□ -1.51
PRE1YER012W PRE10P21242 288 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
PRE1YER012W DBP2P24783 546 aaKnown RBP5.58□□□□□ -1.52
PRE1YER012W APL1P27351 700 aa5.58□□□□□ -1.52
PRE1YER012W HEM3P28789 327 aa5.58□□□□□ -1.52
PRE1YER012W SHM2P37291 469 aaKnown RBP5.58□□□□□ -1.52
PRE1YER012W ENT3P47160 408 aa5.58□□□□□ -1.52
PRE1YER012W GTF1P53260 183 aaPredicted RBP5.58□□□□□ -1.52
PRE1YER012W CLU1Q03690 1277 aaKnown RBP5.58□□□□□ -1.52
PRE1YER012W RAD27P26793 382 aa5.57□□□□□ -1.52
PRE1YER012W YLR358CO13565 187 aa5.56□□□□□ -1.52
PRE1YER012W RPL11AP0C0W9 174 aaKnown RBP5.56□□□□□ -1.52
PRE1YER012W CTS1P29029 562 aa5.56□□□□□ -1.52
PRE1YER012W DUT1P33317 147 aa5.56□□□□□ -1.52
PRE1YER012W GCV2P49095 1034 aa5.56□□□□□ -1.52
PRE1YER012W DUS4Q06063 367 aa5.56□□□□□ -1.52
PRE1YER012W RPL11BQ3E757 174 aaPredicted RBP5.56□□□□□ -1.52
PRE1YER012W UGA2P38067 497 aa5.55□□□□□ -1.52
PRE1YER012W HNT2P49775 206 aa5.55□□□□□ -1.52
PRE1YER012W ENV11P53246 860 aa5.55□□□□□ -1.52
PRE1YER012W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
PRE1YER012W DNA2P38859 1522 aa5.54□□□□□ -1.52
PRE1YER012W TRP2P00899 507 aaKnown RBP5.54□□□□□ -1.52
PRE1YER012W BI4P03879 638 aa5.54□□□□□ -1.52
PRE1YER012W EEB1Q02891 456 aa5.54□□□□□ -1.52
PRE1YER012W YPL066WQ12194 479 aa5.54□□□□□ -1.52
PRE1YER012W SWR1Q05471 1514 aa5.53□□□□□ -1.52
PRE1YER012W INO1P11986 533 aa5.53□□□□□ -1.52
PRE1YER012W PET112P33893 541 aa5.53□□□□□ -1.52
PRE1YER012W TAT2P38967 592 aa5.53□□□□□ -1.52
PRE1YER012W MPT5P39016 859 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
PRE1YER012W GNT1Q12096 491 aa5.53□□□□□ -1.52
PRE1YER012W KIN2P13186 1147 aaKnown RBP5.52□□□□□ -1.53
PRE1YER012W TMA10Q06177 86 aa5.52□□□□□ -1.53
PRE1YER012W SPP382Q06411 708 aaPredicted RBP5.52□□□□□ -1.53
PRE1YER012W GPB1Q08886 897 aa5.52□□□□□ -1.53
PRE1YER012W ACE2P21192 770 aa5.51□□□□□ -1.53
PRE1YER012W CDC20P26309 610 aa5.51□□□□□ -1.53
PRE1YER012W YLR225CQ05948 407 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms