RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C MNN1P39106 762 aa1.72□□□□□ -2.13
SEC3YER008C SNF7P39929 240 aaKnown RBP1.72□□□□□ -2.13
SEC3YER008C SAH1P39954 449 aaKnown RBP1.72□□□□□ -2.13
SEC3YER008C BUD6P41697 788 aa1.72□□□□□ -2.13
SEC3YER008C SLS1P42900 643 aa1.72□□□□□ -2.13
SEC3YER008C YJR107WP47145 328 aa1.72□□□□□ -2.13
SEC3YER008C FAA4P47912 694 aaKnown RBP1.72□□□□□ -2.13
SEC3YER008C MDG1P53885 366 aa1.72□□□□□ -2.13
SEC3YER008C RSC4Q02206 625 aa1.72□□□□□ -2.13
SEC3YER008C YOR223WQ12015 292 aa1.72□□□□□ -2.13
SEC3YER008C YPR053CQ6Q5F3 151 aa1.72□□□□□ -2.13
SEC3YER008C USO1P25386 1790 aa1.72□□□□□ -2.13
SEC3YER008C INO1P11986 533 aa1.72□□□□□ -2.13
SEC3YER008C CYC8P14922 966 aa1.72□□□□□ -2.13
SEC3YER008C GRX1P25373 110 aaKnown RBP1.72□□□□□ -2.13
SEC3YER008C KNS1P32350 737 aaPredicted RBP1.72□□□□□ -2.13
SEC3YER008C AAR2P32357 355 aaPredicted RBP1.72□□□□□ -2.13
SEC3YER008C GRX4P32642 244 aa1.72□□□□□ -2.13
SEC3YER008C GPT2P36148 743 aa1.72□□□□□ -2.13
SEC3YER008C TAT2P38967 592 aa1.72□□□□□ -2.13
SEC3YER008C ZDS1P50111 915 aaKnown RBP1.72□□□□□ -2.13
SEC3YER008C GUP1P53154 560 aa1.72□□□□□ -2.13
SEC3YER008C ROD1Q02805 837 aa1.72□□□□□ -2.13
SEC3YER008C HAS1Q03532 505 aaKnown RBP1.72□□□□□ -2.13
SEC3YER008C MMS22Q06164 1454 aa1.71□□□□□ -2.14
SEC3YER008C AIM26P32858 118 aa1.71□□□□□ -2.14
SEC3YER008C FOL1P53848 824 aa1.71□□□□□ -2.14
SEC3YER008C ESC2Q06340 456 aa1.71□□□□□ -2.14
SEC3YER008C YDR306CQ06640 478 aa1.71□□□□□ -2.14
SEC3YER008C RTT10Q08924 1013 aa1.71□□□□□ -2.14
SEC3YER008C TMA46Q12000 345 aaKnown RBP1.71□□□□□ -2.14
SEC3YER008C STU1P38198 1513 aa1.71□□□□□ -2.14
SEC3YER008C COQ4O13525 335 aa1.71□□□□□ -2.14
SEC3YER008C NAR1P23503 491 aaKnown RBP1.71□□□□□ -2.14
SEC3YER008C PUF4P25339 888 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SEC3YER008C LSB3P43603 459 aaKnown RBP1.71□□□□□ -2.14
SEC3YER008C SKP1P52286 194 aa1.71□□□□□ -2.14
SEC3YER008C DNM1P54861 757 aa1.71□□□□□ -2.14
SEC3YER008C ECM16Q04217 1267 aaKnown RBP1.71□□□□□ -2.14
SEC3YER008C HRK1Q08732 759 aaKnown RBP1.71□□□□□ -2.14
SEC3YER008C NUP170P38181 1502 aa1.71□□□□□ -2.14
SEC3YER008C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SEC3YER008C ABD1P32783 436 aaPredicted RBP1.71□□□□□ -2.14
SEC3YER008C YKL107WP34251 309 aa1.71□□□□□ -2.14
SEC3YER008C NMD2P38798 1089 aaKnown RBP1.71□□□□□ -2.14
SEC3YER008C LEM3P42838 414 aa1.71□□□□□ -2.14
SEC3YER008C NRD1P53617 575 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SEC3YER008C DSE4P53753 1117 aa1.71□□□□□ -2.14
SEC3YER008C NSE3Q05541 303 aa1.71□□□□□ -2.14
SEC3YER008C YLR257WQ06146 321 aaKnown RBP1.71□□□□□ -2.14
SEC3YER008C GIC2Q06648 383 aa1.71□□□□□ -2.14
SEC3YER008C NUP188P52593 1655 aaKnown RBP1.7□□□□□ -2.14
SEC3YER008C NAM7P30771 971 aaKnown RBP1.7□□□□□ -2.14
SEC3YER008C MLS1P30952 554 aa1.7□□□□□ -2.14
SEC3YER008C YNR065CP53751 1116 aa1.7□□□□□ -2.14
SEC3YER008C DOS2P54858 310 aa1.7□□□□□ -2.14
SEC3YER008C RMD1Q03441 430 aa1.7□□□□□ -2.14
SEC3YER008C GIS4Q04233 774 aa1.7□□□□□ -2.14
SEC3YER008C BDF2Q07442 638 aa1.7□□□□□ -2.14
SEC3YER008C SPO75Q07798 868 aa1.7□□□□□ -2.14
SEC3YER008C SPO21Q12411 609 aa1.7□□□□□ -2.14
SEC3YER008C GCR1P07261 785 aa1.7□□□□□ -2.14
SEC3YER008C HVG1P0CE11 249 aa1.7□□□□□ -2.14
SEC3YER008C ERS1P17261 260 aa1.7□□□□□ -2.14
SEC3YER008C MAC1P35192 417 aa1.7□□□□□ -2.14
SEC3YER008C YER156CP40093 338 aaKnown RBP1.7□□□□□ -2.14
SEC3YER008C NUP82P40368 713 aa1.7□□□□□ -2.14
SEC3YER008C GTS1P40956 396 aa1.7□□□□□ -2.14
SEC3YER008C YGR125WP53273 1036 aa1.7□□□□□ -2.14
SEC3YER008C NAN1Q02931 896 aaKnown RBP1.7□□□□□ -2.14
SEC3YER008C NBA1Q08229 501 aaKnown RBP1.7□□□□□ -2.14
SEC3YER008C SOG2Q08817 791 aa1.7□□□□□ -2.14
SEC3YER008C CCP1P00431 361 aa1.7□□□□□ -2.14
SEC3YER008C RET1P22276 1149 aaKnown RBP1.7□□□□□ -2.14
SEC3YER008C CCC2P38995 1004 aa1.7□□□□□ -2.14
SEC3YER008C YGL176CP46945 554 aa1.7□□□□□ -2.14
SEC3YER008C YPL109CQ02981 657 aa1.7□□□□□ -2.14
SEC3YER008C YDL124WQ07551 312 aaKnown RBP1.7□□□□□ -2.14
SEC3YER008C MYO4P32492 1471 aa1.7□□□□□ -2.14
SEC3YER008C PDR15Q04182 1529 aaKnown RBP1.7□□□□□ -2.14
SEC3YER008C HTS1P07263 546 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C ENA1P13587 1091 aa1.69□□□□□ -2.14
SEC3YER008C RAD4P14736 754 aa1.69□□□□□ -2.14
SEC3YER008C LYP1P32487 611 aa1.69□□□□□ -2.14
SEC3YER008C STE5P32917 917 aa1.69□□□□□ -2.14
SEC3YER008C ADD66P36040 267 aa1.69□□□□□ -2.14
SEC3YER008C SAP190P36123 1033 aa1.69□□□□□ -2.14
SEC3YER008C TFA2P36145 328 aa1.69□□□□□ -2.14
SEC3YER008C YRO2P38079 344 aa1.69□□□□□ -2.14
SEC3YER008C ALR2P43553 858 aa1.69□□□□□ -2.14
SEC3YER008C ENA2Q01896 1091 aa1.69□□□□□ -2.14
SEC3YER008C CMR1Q12510 522 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C ENA5Q12691 1091 aa1.69□□□□□ -2.14
SEC3YER008C MET6P05694 767 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C TOM70P07213 617 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C SYP1P25623 870 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C HUL4P40985 892 aa1.69□□□□□ -2.14
SEC3YER008C OSW7P43611 510 aa1.69□□□□□ -2.14
SEC3YER008C JJJ3P47138 172 aa1.69□□□□□ -2.14
SEC3YER008C YGR045CP53229 120 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms