RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C SRB7P47822 140 aa3.03□□□□□ -1.92
SSN2YDR443C CDC55Q00362 526 aa3.03□□□□□ -1.92
SSN2YDR443C MED1Q12321 566 aa3.03□□□□□ -1.92
SSN2YDR443C HSC82P15108 705 aaKnown RBP3.03□□□□□ -1.92
SSN2YDR443C MCM5P29496 775 aaKnown RBP3.03□□□□□ -1.92
SSN2YDR443C DAL3P32459 195 aa3.03□□□□□ -1.92
SSN2YDR443C BEM3P32873 1128 aa3.03□□□□□ -1.92
SSN2YDR443C PEX5P35056 612 aa3.03□□□□□ -1.92
SSN2YDR443C NUP120P35729 1037 aa3.03□□□□□ -1.92
SSN2YDR443C SUM1P46676 1062 aa3.03□□□□□ -1.92
SSN2YDR443C YLR225CQ05948 407 aaKnown RBP3.03□□□□□ -1.92
SSN2YDR443C HDA3Q06623 655 aa3.03□□□□□ -1.92
SSN2YDR443C DNF3Q12674 1656 aa3.03□□□□□ -1.92
SSN2YDR443C ARO1P08566 1588 aaKnown RBP3.03□□□□□ -1.93
SSN2YDR443C YKL133CP36066 463 aa3.02□□□□□ -1.93
SSN2YDR443C CAJ1P39101 391 aa3.02□□□□□ -1.93
SSN2YDR443C GPD2P41911 440 aaKnown RBP3.02□□□□□ -1.93
SSN2YDR443C PRP3Q03338 469 aaPredicted RBP3.02□□□□□ -1.93
SSN2YDR443C LAP2Q10740 671 aa3.02□□□□□ -1.93
SSN2YDR443C TY3B-GQ99315 1547 aa3.02□□□□□ -1.93
SSN2YDR443C RPP1BP10622 106 aaKnown RBP3.02□□□□□ -1.93
SSN2YDR443C VBA5P36172 582 aa3.02□□□□□ -1.93
SSN2YDR443C GDH3P39708 457 aa3.02□□□□□ -1.93
SSN2YDR443C ERP6P53198 216 aa3.02□□□□□ -1.93
SSN2YDR443C YNL058CP53947 316 aa3.02□□□□□ -1.93
SSN2YDR443C CDC45Q08032 650 aa3.02□□□□□ -1.93
SSN2YDR443C TFB4Q12004 338 aa3.02□□□□□ -1.93
SSN2YDR443C KCC4P25389 1037 aa3.02□□□□□ -1.93
SSN2YDR443C YHL041WP38730 149 aa3.02□□□□□ -1.93
SSN2YDR443C MON1P53129 644 aa3.02□□□□□ -1.93
SSN2YDR443C EEB1Q02891 456 aa3.02□□□□□ -1.93
SSN2YDR443C UGO1Q03327 502 aa3.02□□□□□ -1.93
SSN2YDR443C TAF8Q03750 510 aa3.02□□□□□ -1.93
SSN2YDR443C HFD1Q04458 532 aa3.02□□□□□ -1.93
SSN2YDR443C HIM1Q06674 414 aa3.02□□□□□ -1.93
SSN2YDR443C YDL124WQ07551 312 aaKnown RBP3.02□□□□□ -1.93
SSN2YDR443C RRG1Q12167 365 aaPredicted RBP3.02□□□□□ -1.93
SSN2YDR443C PDR15Q04182 1529 aaKnown RBP3.02□□□□□ -1.93
SSN2YDR443C PUF4P25339 888 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SSN2YDR443C VBA3P25594 458 aa3.02□□□□□ -1.93
SSN2YDR443C PRP40P33203 583 aaKnown RBP3.02□□□□□ -1.93
SSN2YDR443C YNR063WP53749 607 aa3.02□□□□□ -1.93
SSN2YDR443C BSC2Q05611 235 aa3.02□□□□□ -1.93
SSN2YDR443C UTP13Q05946 817 aaKnown RBP3.02□□□□□ -1.93
SSN2YDR443C YPR084WQ06821 456 aa3.02□□□□□ -1.93
SSN2YDR443C MCD1Q12158 566 aa3.02□□□□□ -1.93
SSN2YDR443C ENT1Q12518 454 aa3.02□□□□□ -1.93
SSN2YDR443C FUR1P18562 216 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C HXT5P38695 592 aa3.01□□□□□ -1.93
SSN2YDR443C TAN1P53072 289 aaPredicted RBP3.01□□□□□ -1.93
SSN2YDR443C NST1P53935 1240 aa3.01□□□□□ -1.93
SSN2YDR443C RCF1Q03713 159 aa3.01□□□□□ -1.93
SSN2YDR443C CAB1Q04430 367 aa3.01□□□□□ -1.93
SSN2YDR443C YPR097WQ06839 1073 aa3.01□□□□□ -1.93
SSN2YDR443C CFT2Q12102 859 aaPredicted RBP3.01□□□□□ -1.93
SSN2YDR443C CLF1Q12309 687 aaPredicted RBP3.01□□□□□ -1.93
SSN2YDR443C RPS6AP0CX37 236 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C RPS6BP0CX38 236 aaPredicted RBP3.01□□□□□ -1.93
SSN2YDR443C SBP1P10080 294 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C PFK1P16861 987 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C GLK1P17709 500 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C SAN1P22470 610 aa3.01□□□□□ -1.93
SSN2YDR443C MKK2P32491 506 aa3.01□□□□□ -1.93
SSN2YDR443C IXR1P33417 597 aa3.01□□□□□ -1.93
SSN2YDR443C KTR2P33550 425 aa3.01□□□□□ -1.93
SSN2YDR443C VPS8P39702 1274 aa3.01□□□□□ -1.93
SSN2YDR443C PFD1P46988 109 aa3.01□□□□□ -1.93
SSN2YDR443C MEP3P53390 489 aa3.01□□□□□ -1.93
SSN2YDR443C GTR1Q00582 310 aa3.01□□□□□ -1.93
SSN2YDR443C HSH49Q99181 213 aaPredicted RBP3.01□□□□□ -1.93
SSN2YDR443C SEC18P18759 758 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C SIS1P25294 352 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C PRP19P32523 503 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C SEA4P38164 1038 aa3.01□□□□□ -1.93
SSN2YDR443C SEC26P41810 973 aaKnown RBP3.01□□□□□ -1.93
SSN2YDR443C MAL11P53048 616 aa3.01□□□□□ -1.93
SSN2YDR443C SPN1Q06505 410 aaPredicted RBP3.01□□□□□ -1.93
SSN2YDR443C RTT10Q08924 1013 aa3.01□□□□□ -1.93
SSN2YDR443C CEX1Q12453 761 aa3.01□□□□□ -1.93
SSN2YDR443C RAD18P10862 487 aa3□□□□□ -1.93
SSN2YDR443C SLX5P32828 619 aaKnown RBP3□□□□□ -1.93
SSN2YDR443C STO1P34160 861 aaKnown RBP3□□□□□ -1.93
SSN2YDR443C YBR284WP38150 797 aa3□□□□□ -1.93
SSN2YDR443C GPP2P40106 250 aaKnown RBP3□□□□□ -1.93
SSN2YDR443C YJL055WP47044 245 aa3□□□□□ -1.93
SSN2YDR443C MTQ2Q03920 221 aaPredicted RBP3□□□□□ -1.93
SSN2YDR443C TOM70P07213 617 aaKnown RBP3□□□□□ -1.93
SSN2YDR443C XKS1P42826 600 aa3□□□□□ -1.93
SSN2YDR443C YFL034WP43564 1073 aa3□□□□□ -1.93
SSN2YDR443C SNP1Q00916 300 aaPredicted RBP3□□□□□ -1.93
SSN2YDR443C NSE5Q03718 556 aa3□□□□□ -1.93
SSN2YDR443C MLC2Q06580 163 aa3□□□□□ -1.93
SSN2YDR443C GIC2Q06648 383 aa3□□□□□ -1.93
SSN2YDR443C APL5Q08951 932 aaKnown RBP3□□□□□ -1.93
SSN2YDR443C RRP6Q12149 733 aaKnown RBP3□□□□□ -1.93
SSN2YDR443C TOP3P13099 656 aa3□□□□□ -1.93
SSN2YDR443C SPO16P17122 198 aa3□□□□□ -1.93
SSN2YDR443C PIC2P40035 300 aa3□□□□□ -1.93
SSN2YDR443C APL6P46682 809 aa3□□□□□ -1.93
SSN2YDR443C YPR172WQ06608 200 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms