RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W TIF35Q04067 274 aaKnown RBP3.67□□□□□ -1.82
SNX41YDR425W RSC58Q07979 502 aa3.67□□□□□ -1.82
SNX41YDR425W RAD27P26793 382 aa3.67□□□□□ -1.82
SNX41YDR425W TSA1P34760 196 aaKnown RBP3.67□□□□□ -1.82
SNX41YDR425W POL12P38121 705 aaPredicted RBP3.67□□□□□ -1.82
SNX41YDR425W PIK1P39104 1066 aa3.67□□□□□ -1.82
SNX41YDR425W AVT1P47082 602 aa3.67□□□□□ -1.82
SNX41YDR425W EEB1Q02891 456 aa3.67□□□□□ -1.82
SNX41YDR425W SPO21Q12411 609 aa3.67□□□□□ -1.82
SNX41YDR425W COQ4O13525 335 aa3.66□□□□□ -1.82
SNX41YDR425W NAP1P25293 417 aaKnown RBP3.66□□□□□ -1.82
SNX41YDR425W SEG2P34250 1132 aa3.66□□□□□ -1.82
SNX41YDR425W GPB2P39717 880 aa3.66□□□□□ -1.82
SNX41YDR425W NIT1P40447 199 aa3.66□□□□□ -1.82
SNX41YDR425W HNT2P49775 206 aa3.66□□□□□ -1.82
SNX41YDR425W YGR053CP53234 283 aa3.66□□□□□ -1.82
SNX41YDR425W YER152CP10356 443 aa3.65□□□□□ -1.82
SNX41YDR425W MLS1P30952 554 aa3.65□□□□□ -1.82
SNX41YDR425W LYP1P32487 611 aa3.65□□□□□ -1.82
SNX41YDR425W CCZ1P38273 704 aa3.65□□□□□ -1.82
SNX41YDR425W ENV11P53246 860 aa3.65□□□□□ -1.82
SNX41YDR425W NBA1Q08229 501 aaKnown RBP3.65□□□□□ -1.82
SNX41YDR425W TRP2P00899 507 aaKnown RBP3.64□□□□□ -1.83
SNX41YDR425W IRC24P40580 263 aa3.64□□□□□ -1.83
SNX41YDR425W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SNX41YDR425W CDA2Q06703 312 aa3.64□□□□□ -1.83
SNX41YDR425W GNT1Q12096 491 aa3.64□□□□□ -1.83
SNX41YDR425W YDL177CQ12257 170 aa3.64□□□□□ -1.83
SNX41YDR425W SNU71P53207 620 aaKnown RBP3.64□□□□□ -1.83
SNX41YDR425W PIN2Q12057 282 aa3.64□□□□□ -1.83
SNX41YDR425W CLN2P20438 545 aa3.63□□□□□ -1.83
SNX41YDR425W PUF4P25339 888 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SNX41YDR425W VPS16Q03308 798 aa3.63□□□□□ -1.83
SNX41YDR425W AIM26P32858 118 aa3.62□□□□□ -1.83
SNX41YDR425W SEC26P41810 973 aaKnown RBP3.62□□□□□ -1.83
SNX41YDR425W TYW3P53177 273 aa3.62□□□□□ -1.83
SNX41YDR425W ATG13Q06628 738 aa3.62□□□□□ -1.83
SNX41YDR425W RKM4Q12504 494 aa3.62□□□□□ -1.83
SNX41YDR425W ABZ1P37254 787 aaPredicted RBP3.62□□□□□ -1.83
SNX41YDR425W PAM1P37304 830 aaKnown RBP3.62□□□□□ -1.83
SNX41YDR425W PNT1P38969 423 aa3.62□□□□□ -1.83
SNX41YDR425W YFL054CP43549 646 aa3.62□□□□□ -1.83
SNX41YDR425W PRP43P53131 767 aaKnown RBP3.62□□□□□ -1.83
SNX41YDR425W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SNX41YDR425W YPL066WQ12194 479 aa3.62□□□□□ -1.83
SNX41YDR425W SPS1P08458 490 aa3.61□□□□□ -1.83
SNX41YDR425W RPL11AP0C0W9 174 aaKnown RBP3.61□□□□□ -1.83
SNX41YDR425W RNQ1P25367 405 aa3.61□□□□□ -1.83
SNX41YDR425W MCM7P38132 845 aa3.61□□□□□ -1.83
SNX41YDR425W FAA4P47912 694 aaKnown RBP3.61□□□□□ -1.83
SNX41YDR425W FOL2P51601 243 aaKnown RBP3.61□□□□□ -1.83
SNX41YDR425W RPL11BQ3E757 174 aaPredicted RBP3.61□□□□□ -1.83
SNX41YDR425W INO1P11986 533 aa3.6□□□□□ -1.83
SNX41YDR425W PRP6P19735 899 aaPredicted RBP3.6□□□□□ -1.83
SNX41YDR425W GAS1P22146 559 aaKnown RBP3.6□□□□□ -1.83
SNX41YDR425W SLA2P33338 968 aa3.6□□□□□ -1.83
SNX41YDR425W SNO2P53823 222 aa3.6□□□□□ -1.83
SNX41YDR425W MRPL22P53881 309 aa3.6□□□□□ -1.83
SNX41YDR425W BAS1P22035 811 aa3.6□□□□□ -1.83
SNX41YDR425W DBP2P24783 546 aaKnown RBP3.6□□□□□ -1.83
SNX41YDR425W THI80P35202 319 aa3.6□□□□□ -1.83
SNX41YDR425W ETP1P38748 585 aaKnown RBP3.6□□□□□ -1.83
SNX41YDR425W GEM1P39722 662 aa3.6□□□□□ -1.83
SNX41YDR425W MXR1P40029 184 aa3.6□□□□□ -1.83
SNX41YDR425W GDE1Q02979 1223 aa3.6□□□□□ -1.83
SNX41YDR425W SPO20Q04359 397 aa3.6□□□□□ -1.83
SNX41YDR425W RSB1Q08417 382 aa3.6□□□□□ -1.83
SNX41YDR425W ACM1Q08981 209 aa3.6□□□□□ -1.83
SNX41YDR425W AGP1P25376 633 aa3.59□□□□□ -1.83
SNX41YDR425W UBP5P39944 805 aa3.59□□□□□ -1.83
SNX41YDR425W SIP5P40210 489 aaKnown RBP3.59□□□□□ -1.83
SNX41YDR425W YKL107WP34251 309 aa3.58□□□□□ -1.84
SNX41YDR425W MOT2P34909 587 aaKnown RBP3.58□□□□□ -1.84
SNX41YDR425W UGA2P38067 497 aa3.58□□□□□ -1.84
SNX41YDR425W RRT14P40470 206 aa3.58□□□□□ -1.84
SNX41YDR425W MAD1P40957 749 aa3.58□□□□□ -1.84
SNX41YDR425W KRI1P42846 591 aaKnown RBP3.58□□□□□ -1.84
SNX41YDR425W YDR132CQ03900 495 aa3.58□□□□□ -1.84
SNX41YDR425W SIZ1Q04195 904 aa3.58□□□□□ -1.84
SNX41YDR425W JIP5Q06214 492 aaPredicted RBP3.58□□□□□ -1.84
SNX41YDR425W RIB2Q12362 591 aaKnown RBP3.58□□□□□ -1.84
SNX41YDR425W SOD2P00447 233 aa3.58□□□□□ -1.84
SNX41YDR425W ACE2P21192 770 aa3.58□□□□□ -1.84
SNX41YDR425W PIN4P34217 668 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SNX41YDR425W RFC5P38251 354 aa3.58□□□□□ -1.84
SNX41YDR425W SNF7P39929 240 aaKnown RBP3.58□□□□□ -1.84
SNX41YDR425W YGL176CP46945 554 aa3.58□□□□□ -1.84
SNX41YDR425W YLR225CQ05948 407 aaKnown RBP3.58□□□□□ -1.84
SNX41YDR425W SPP382Q06411 708 aaPredicted RBP3.58□□□□□ -1.84
SNX41YDR425W SVS1Q12254 260 aa3.58□□□□□ -1.84
SNX41YDR425W THS1P04801 734 aaKnown RBP3.57□□□□□ -1.84
SNX41YDR425W SBA1P28707 216 aaKnown RBP3.57□□□□□ -1.84
SNX41YDR425W MTC3P53077 123 aa3.57□□□□□ -1.84
SNX41YDR425W RIM8P53179 542 aa3.57□□□□□ -1.84
SNX41YDR425W YLL058WQ12198 575 aa3.57□□□□□ -1.84
SNX41YDR425W BI4P03879 638 aa3.56□□□□□ -1.84
SNX41YDR425W SRM1P21827 482 aa3.56□□□□□ -1.84
SNX41YDR425W AIM3P38266 947 aaKnown RBP3.56□□□□□ -1.84
SNX41YDR425W RSM24Q03976 319 aa3.56□□□□□ -1.84
SNX41YDR425W SHE9Q04172 456 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms