RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W SKP1P52286 194 aa6.68□□□□□ -1.34
SPT3YDR392W MTO1P53070 669 aa6.68□□□□□ -1.34
SPT3YDR392W PPM2Q08282 695 aa6.68□□□□□ -1.34
SPT3YDR392W NCL1P38205 684 aaKnown RBP6.67□□□□□ -1.34
SPT3YDR392W AMN1P38285 549 aaPredicted RBP6.67□□□□□ -1.34
SPT3YDR392W KTR7P40504 517 aa6.67□□□□□ -1.34
SPT3YDR392W HUL4P40985 892 aa6.67□□□□□ -1.34
SPT3YDR392W MFB1Q04922 465 aa6.67□□□□□ -1.34
SPT3YDR392W ADR1P07248 1323 aa6.67□□□□□ -1.34
SPT3YDR392W KAP122P32767 1081 aa6.66□□□□□ -1.34
SPT3YDR392W NGR1P32831 672 aaKnown RBP6.66□□□□□ -1.34
SPT3YDR392W CFT2Q12102 859 aaPredicted RBP6.66□□□□□ -1.34
SPT3YDR392W NHA1Q99271 985 aa6.66□□□□□ -1.34
SPT3YDR392W TPS3P38426 1054 aaKnown RBP6.65□□□□□ -1.34
SPT3YDR392W UBX2Q04228 584 aa6.65□□□□□ -1.34
SPT3YDR392W KSP1P38691 1029 aaKnown RBP6.64□□□□□ -1.35
SPT3YDR392W MXR1P40029 184 aa6.64□□□□□ -1.35
SPT3YDR392W FOL2P51601 243 aaKnown RBP6.64□□□□□ -1.35
SPT3YDR392W MTC3P53077 123 aa6.64□□□□□ -1.35
SPT3YDR392W MCA1Q08601 432 aa6.64□□□□□ -1.35
SPT3YDR392W MET7Q08645 548 aa6.64□□□□□ -1.35
SPT3YDR392W NUP145P49687 1317 aa6.64□□□□□ -1.35
SPT3YDR392W HEM1P09950 548 aaPredicted RBP6.63□□□□□ -1.35
SPT3YDR392W MCD4P36051 919 aa6.63□□□□□ -1.35
SPT3YDR392W ALG14P38242 237 aa6.63□□□□□ -1.35
SPT3YDR392W PRK1P40494 810 aa6.63□□□□□ -1.35
SPT3YDR392W IRC10Q08118 586 aa6.63□□□□□ -1.35
SPT3YDR392W CSF1Q12150 2958 aa6.62□□□□□ -1.35
SPT3YDR392W PGM2P37012 569 aaKnown RBP6.62□□□□□ -1.35
SPT3YDR392W APM2P38700 605 aa6.62□□□□□ -1.35
SPT3YDR392W PRY1P47032 299 aa6.62□□□□□ -1.35
SPT3YDR392W AUS1Q08409 1394 aa6.61□□□□□ -1.35
SPT3YDR392W PRE10P21242 288 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
SPT3YDR392W VAN1P23642 535 aa6.61□□□□□ -1.35
SPT3YDR392W LEO1P38439 464 aa6.61□□□□□ -1.35
SPT3YDR392W YTA12P40341 825 aa6.61□□□□□ -1.35
SPT3YDR392W GSM1P42950 618 aa6.61□□□□□ -1.35
SPT3YDR392W CUS1Q02554 436 aaPredicted RBP6.61□□□□□ -1.35
SPT3YDR392W SRS2P12954 1174 aa6.6□□□□□ -1.35
SPT3YDR392W ROM1P53046 1155 aa6.6□□□□□ -1.35
SPT3YDR392W SSK22P25390 1331 aaPredicted RBP6.59□□□□□ -1.35
SPT3YDR392W PIN2Q12057 282 aa6.59□□□□□ -1.35
SPT3YDR392W GLT1Q12680 2145 aaKnown RBP6.59□□□□□ -1.35
SPT3YDR392W IDI1P15496 288 aa6.58□□□□□ -1.36
SPT3YDR392W PPZ1P26570 692 aa6.58□□□□□ -1.36
SPT3YDR392W OCT1P35999 772 aa6.58□□□□□ -1.36
SPT3YDR392W BUD9P53226 547 aa6.58□□□□□ -1.36
SPT3YDR392W PRP42Q03776 544 aaKnown RBP6.58□□□□□ -1.36
SPT3YDR392W EAF1Q06337 982 aa6.58□□□□□ -1.36
SPT3YDR392W HAT1Q12341 374 aa6.58□□□□□ -1.36
SPT3YDR392W YDR524C-BQ3E6R4 66 aa6.58□□□□□ -1.36
SPT3YDR392W ECM29P38737 1868 aa6.58□□□□□ -1.36
SPT3YDR392W RPC31P17890 251 aa6.57□□□□□ -1.36
SPT3YDR392W NAR1P23503 491 aaKnown RBP6.57□□□□□ -1.36
SPT3YDR392W NAB2P32505 525 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
SPT3YDR392W PDR3P33200 976 aa6.57□□□□□ -1.36
SPT3YDR392W YNR040WP53736 256 aa6.57□□□□□ -1.36
SPT3YDR392W GIS4Q04233 774 aa6.57□□□□□ -1.36
SPT3YDR392W KRE2P27809 442 aa6.56□□□□□ -1.36
SPT3YDR392W SYN8P31377 255 aa6.56□□□□□ -1.36
SPT3YDR392W BCS1P32839 456 aa6.56□□□□□ -1.36
SPT3YDR392W TRS33Q99394 268 aa6.56□□□□□ -1.36
SPT3YDR392W TRP2P00899 507 aaKnown RBP6.55□□□□□ -1.36
SPT3YDR392W TGL4P36165 910 aa6.55□□□□□ -1.36
SPT3YDR392W QDR2P40474 542 aa6.55□□□□□ -1.36
SPT3YDR392W BIO5P53744 561 aaKnown RBP6.55□□□□□ -1.36
SPT3YDR392W SEC3P33332 1336 aaKnown RBP6.54□□□□□ -1.36
SPT3YDR392W VAB2P40003 282 aa6.54□□□□□ -1.36
SPT3YDR392W DNM1P54861 757 aa6.54□□□□□ -1.36
SPT3YDR392W RPS7AP26786 190 aaKnown RBP6.53□□□□□ -1.36
SPT3YDR392W ACK1Q07622 623 aaPredicted RBP6.53□□□□□ -1.36
SPT3YDR392W SSP2Q08646 371 aa6.53□□□□□ -1.36
SPT3YDR392W AI3P03877 415 aa6.52□□□□□ -1.37
SPT3YDR392W SPE2P21182 396 aa6.52□□□□□ -1.37
SPT3YDR392W TTI1P36097 1038 aa6.52□□□□□ -1.37
SPT3YDR392W YNL034WP53963 612 aa6.52□□□□□ -1.37
SPT3YDR392W YNL018CP53976 612 aa6.52□□□□□ -1.37
SPT3YDR392W ECM23Q02710 187 aa6.52□□□□□ -1.37
SPT3YDR392W SLP1Q12232 587 aa6.52□□□□□ -1.37
SPT3YDR392W POL3P15436 1097 aa6.51□□□□□ -1.37
SPT3YDR392W SAC7P17121 654 aa6.51□□□□□ -1.37
SPT3YDR392W SFA1P32771 386 aa6.5□□□□□ -1.37
SPT3YDR392W RRM3P38766 723 aa6.5□□□□□ -1.37
SPT3YDR392W DYS1P38791 387 aa6.5□□□□□ -1.37
SPT3YDR392W MRPL33P20084 86 aa6.49□□□□□ -1.37
SPT3YDR392W VMA3P25515 160 aa6.49□□□□□ -1.37
SPT3YDR392W IMG2P25642 146 aaPredicted RBP6.49□□□□□ -1.37
SPT3YDR392W URK1P27515 501 aa6.49□□□□□ -1.37
SPT3YDR392W SUV3P32580 737 aa6.49□□□□□ -1.37
SPT3YDR392W LYS14P40971 790 aa6.49□□□□□ -1.37
SPT3YDR392W ARI1P53111 347 aaKnown RBP6.49□□□□□ -1.37
SPT3YDR392W ITC1P53125 1264 aa6.49□□□□□ -1.37
SPT3YDR392W YOR296WQ08748 1289 aa6.49□□□□□ -1.37
SPT3YDR392W PHR1P05066 565 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
SPT3YDR392W HCM1P25364 564 aa6.48□□□□□ -1.37
SPT3YDR392W ARP1P38696 384 aa6.48□□□□□ -1.37
SPT3YDR392W KEL1P38853 1164 aaKnown RBP6.48□□□□□ -1.37
SPT3YDR392W ALO1P54783 526 aaKnown RBP6.48□□□□□ -1.37
SPT3YDR392W RGT1P32862 1170 aa6.47□□□□□ -1.37
SPT3YDR392W UBX7P38349 436 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms