RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	JIP4	Q03361	876 aa		8.16	□□□□□ -1.1
SKP1	YDR328C	OYE2	Q03558	400 aa	Known RBP	8.16	□□□□□ -1.1
SKP1	YDR328C	FOB1	O13329	566 aa		8.15	□□□□□ -1.1
SKP1	YDR328C	TUF1	P02992	437 aa	Known RBP	8.15	□□□□□ -1.1
SKP1	YDR328C	CDC60	P26637	1090 aa	Known RBP	8.15	□□□□□ -1.1
SKP1	YDR328C	HIR1	P32479	840 aa		8.15	□□□□□ -1.1
SKP1	YDR328C	SHP1	P34223	423 aa		8.15	□□□□□ -1.1
SKP1	YDR328C	ASH1	P34233	588 aa		8.15	□□□□□ -1.1
SKP1	YDR328C	ISW1	P38144	1129 aa		8.15	□□□□□ -1.1
SKP1	YDR328C	ERG7	P38604	731 aa		8.15	□□□□□ -1.1
SKP1	YDR328C	ORC6	P38826	435 aa		8.15	□□□□□ -1.1
SKP1	YDR328C	SDA1	P53313	767 aa	Known RBP	8.15	□□□□□ -1.1
SKP1	YDR328C	PTA1	Q01329	785 aa	Predicted RBP	8.15	□□□□□ -1.1
SKP1	YDR328C	DUS3	Q06053	668 aa	Known RBP	8.15	□□□□□ -1.1
SKP1	YDR328C	ISA1	Q07821	250 aa	Predicted RBP	8.15	□□□□□ -1.1
SKP1	YDR328C	TY1B-A	O13527	1196 aa	Known RBP	8.14	□□□□□ -1.11
SKP1	YDR328C	CDC19	P00549	500 aa	Known RBP	8.14	□□□□□ -1.11
SKP1	YDR328C	CKA2	P19454	339 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	EUG1	P32474	517 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	RSC30	P38781	883 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	SPR3	P41901	512 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	ROG3	P43602	733 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	UBA2	P52488	636 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	RSC1	P53236	928 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	YGR125W	P53273	1036 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	YAF9	P53930	226 aa		8.14	□□□□□ -1.11
SKP1	YDR328C	ILV1	P00927	576 aa	Known RBP	8.13	□□□□□ -1.11
SKP1	YDR328C	SES1	P07284	462 aa	Known RBP	8.13	□□□□□ -1.11
SKP1	YDR328C	GSY1	P23337	708 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	GSY2	P27472	705 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	SRP40	P32583	406 aa	Predicted RBP	8.13	□□□□□ -1.11
SKP1	YDR328C	UBP11	P36026	717 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	VPS29	P38759	282 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	CTR1	P49573	406 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	CBK1	P53894	756 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	VMS1	Q04311	632 aa	Known RBP	8.13	□□□□□ -1.11
SKP1	YDR328C	FUS2	Q05670	677 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	SGD1	Q06132	899 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	SMC6	Q12749	1114 aa		8.13	□□□□□ -1.11
SKP1	YDR328C	YEL076C-A	P0CX16	216 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	YLR464W	P0CX17	216 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	TAF13	P11747	167 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	ATE1	P16639	503 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	ISY1	P21374	235 aa	Predicted RBP	8.12	□□□□□ -1.11
SKP1	YDR328C	PET10	P36139	283 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	RRM3	P38766	723 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	YEL076C	P39971	216 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	BRE2	P43132	505 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	VTC2	P43585	828 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	LCD1	Q04377	747 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	PHM6	Q05637	104 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	ADY4	Q05955	493 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	TY3A-G	Q12173	290 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	ERP3	Q12403	225 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	TIF6	Q12522	245 aa	Known RBP	8.12	□□□□□ -1.11
SKP1	YDR328C	TY3A-I	Q99219	290 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	ECM29	P38737	1868 aa		8.12	□□□□□ -1.11
SKP1	YDR328C	ESS1	P22696	170 aa		8.11	□□□□□ -1.11
SKP1	YDR328C	TKL1	P23254	680 aa	Known RBP	8.11	□□□□□ -1.11
SKP1	YDR328C	CDC15	P27636	974 aa		8.11	□□□□□ -1.11
SKP1	YDR328C	PGM1	P33401	570 aa	Known RBP	8.11	□□□□□ -1.11
SKP1	YDR328C	FYV10	P40492	516 aa		8.11	□□□□□ -1.11
SKP1	YDR328C	GPD2	P41911	440 aa	Known RBP	8.11	□□□□□ -1.11
SKP1	YDR328C	SSL2	Q00578	843 aa		8.11	□□□□□ -1.11
SKP1	YDR328C	DUS4	Q06063	367 aa		8.11	□□□□□ -1.11
SKP1	YDR328C	PSR2	Q07949	397 aa		8.11	□□□□□ -1.11
SKP1	YDR328C	RKM4	Q12504	494 aa		8.11	□□□□□ -1.11
SKP1	YDR328C	PGK1	P00560	416 aa	Known RBP	8.1	□□□□□ -1.11
SKP1	YDR328C	MIP1	P15801	1254 aa		8.1	□□□□□ -1.11
SKP1	YDR328C	NUP82	P40368	713 aa		8.1	□□□□□ -1.11
SKP1	YDR328C	CNM67	P53865	581 aa	Known RBP	8.1	□□□□□ -1.11
SKP1	YDR328C	YLH47	Q06493	454 aa		8.1	□□□□□ -1.11
SKP1	YDR328C	CLN3	P13365	580 aa		8.09	□□□□□ -1.11
SKP1	YDR328C	PRP22	P24384	1145 aa	Known RBP	8.09	□□□□□ -1.11
SKP1	YDR328C	CLB5	P30283	435 aa		8.09	□□□□□ -1.11
SKP1	YDR328C	SUV3	P32580	737 aa		8.09	□□□□□ -1.11
SKP1	YDR328C	SAC6	P32599	642 aa	Known RBP	8.09	□□□□□ -1.11
SKP1	YDR328C	SEC8	P32855	1065 aa		8.09	□□□□□ -1.11
SKP1	YDR328C	DBP7	P36120	742 aa	Known RBP	8.09	□□□□□ -1.11
SKP1	YDR328C	MRPL10	P36520	322 aa		8.09	□□□□□ -1.11
SKP1	YDR328C	REG2	P38232	338 aa		8.09	□□□□□ -1.11
SKP1	YDR328C	YGL039W	P53183	348 aa	Known RBP	8.09	□□□□□ -1.11
SKP1	YDR328C	DIP5	P53388	608 aa		8.09	□□□□□ -1.11
SKP1	YDR328C	PGA2	P53903	129 aa		8.09	□□□□□ -1.11
SKP1	YDR328C	YLR225C	Q05948	407 aa	Known RBP	8.09	□□□□□ -1.11
SKP1	YDR328C	SUP45	P12385	437 aa	Known RBP	8.08	□□□□□ -1.12
SKP1	YDR328C	SIP3	P38717	1229 aa		8.08	□□□□□ -1.12
SKP1	YDR328C	BCD1	P38772	366 aa		8.08	□□□□□ -1.12
SKP1	YDR328C	SLD5	Q03406	294 aa		8.08	□□□□□ -1.12
SKP1	YDR328C	YPR148C	Q06523	435 aa		8.08	□□□□□ -1.12
SKP1	YDR328C	SRF1	Q12516	437 aa		8.08	□□□□□ -1.12
SKP1	YDR328C	TFC4	P33339	1025 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	MPE1	P35728	441 aa	Known RBP	8.07	□□□□□ -1.12
SKP1	YDR328C	PIH1	P38768	344 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	NOC2	P39744	710 aa	Known RBP	8.07	□□□□□ -1.12
SKP1	YDR328C	MXR1	P40029	184 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	FIS1	P40515	155 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	YGR237C	P50089	785 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	GUP1	P53154	560 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	DUS1	P53759	423 aa	Known RBP	8.07	□□□□□ -1.12

Retrieved 100 of 5,963 RNA–protein pairs in 229.4 ms