RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W CDC6P09119 513 aa1.93□□□□□ -2.1
CFT1YDR301W THR4P16120 514 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W MCR1P36060 302 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W PHO88P38264 188 aaPredicted RBP1.93□□□□□ -2.1
CFT1YDR301W BUD6P41697 788 aa1.93□□□□□ -2.1
CFT1YDR301W KRI1P42846 591 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W NUP42P49686 430 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W TMA64Q04600 565 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W PHM6Q05637 104 aa1.93□□□□□ -2.1
CFT1YDR301W TCO89Q08921 799 aa1.93□□□□□ -2.1
CFT1YDR301W CFT2Q12102 859 aaPredicted RBP1.93□□□□□ -2.1
CFT1YDR301W PHR1P05066 565 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
CFT1YDR301W RDS1P25611 832 aa1.92□□□□□ -2.1
CFT1YDR301W URA1P28272 314 aaPredicted RBP1.92□□□□□ -2.1
CFT1YDR301W RGT1P32862 1170 aa1.92□□□□□ -2.1
CFT1YDR301W GAA1P39012 614 aa1.92□□□□□ -2.1
CFT1YDR301W UBP9P39967 754 aa1.92□□□□□ -2.1
CFT1YDR301W HMF1P40037 129 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W CCT5P40413 562 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W NCS6P53088 359 aa1.92□□□□□ -2.1
CFT1YDR301W LIF1P53150 421 aa1.92□□□□□ -2.1
CFT1YDR301W BUL2Q03758 920 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W CIT1P00890 479 aa1.92□□□□□ -2.1
CFT1YDR301W TCP1P12612 559 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W SCJ1P25303 377 aa1.92□□□□□ -2.1
CFT1YDR301W SAS3P34218 831 aa1.92□□□□□ -2.1
CFT1YDR301W RSM25P40496 264 aa1.92□□□□□ -2.1
CFT1YDR301W GPD2P41911 440 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W FIG4P42837 879 aa1.92□□□□□ -2.1
CFT1YDR301W VTC2P43585 828 aa1.92□□□□□ -2.1
CFT1YDR301W YLR225CQ05948 407 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W CSC1Q06538 782 aa1.92□□□□□ -2.1
CFT1YDR301W YOR296WQ08748 1289 aa1.92□□□□□ -2.1
CFT1YDR301W LAP2Q10740 671 aa1.92□□□□□ -2.1
CFT1YDR301W ICL2Q12031 575 aa1.92□□□□□ -2.1
CFT1YDR301W ERP3Q12403 225 aa1.92□□□□□ -2.1
CFT1YDR301W PGK1P00560 416 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W MAK16P10962 306 aaPredicted RBP1.92□□□□□ -2.1
CFT1YDR301W FRS2P15625 503 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W IMP2'P32351 346 aa1.92□□□□□ -2.1
CFT1YDR301W BIO2P32451 375 aa1.92□□□□□ -2.1
CFT1YDR301W SUV3P32580 737 aa1.92□□□□□ -2.1
CFT1YDR301W PGM1P33401 570 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W DBP7P36120 742 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W RFC5P38251 354 aa1.92□□□□□ -2.1
CFT1YDR301W EFM2P38347 419 aa1.92□□□□□ -2.1
CFT1YDR301W YJL007CP47080 104 aa1.92□□□□□ -2.1
CFT1YDR301W ASE1P50275 885 aa1.92□□□□□ -2.1
CFT1YDR301W RPL34AP87262 121 aaPredicted RBP1.92□□□□□ -2.1
CFT1YDR301W ESF1Q06344 628 aaKnown RBP1.92□□□□□ -2.1
CFT1YDR301W FBP1P09201 348 aa1.91□□□□□ -2.1
CFT1YDR301W MIP1P15801 1254 aa1.91□□□□□ -2.1
CFT1YDR301W ISY1P21374 235 aaPredicted RBP1.91□□□□□ -2.1
CFT1YDR301W SDH2P21801 266 aa1.91□□□□□ -2.1
CFT1YDR301W EUG1P32474 517 aa1.91□□□□□ -2.1
CFT1YDR301W RPN12P32496 274 aa1.91□□□□□ -2.1
CFT1YDR301W VID28P40547 921 aa1.91□□□□□ -2.1
CFT1YDR301W FMS1P50264 508 aa1.91□□□□□ -2.1
CFT1YDR301W DUS1P53759 423 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W ORC4P54791 529 aa1.91□□□□□ -2.1
CFT1YDR301W CUS1Q02554 436 aaPredicted RBP1.91□□□□□ -2.1
CFT1YDR301W COG8Q04632 607 aa1.91□□□□□ -2.1
CFT1YDR301W MMR1Q06324 491 aa1.91□□□□□ -2.1
CFT1YDR301W UBR2Q07963 1872 aa1.91□□□□□ -2.1
CFT1YDR301W PCK1P10963 549 aa1.91□□□□□ -2.1
CFT1YDR301W RPL8AP17076 256 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W SAM2P19358 384 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W CDC3P32457 520 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W SLX5P32828 619 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W ASH1P34233 588 aa1.91□□□□□ -2.1
CFT1YDR301W FIS1P40515 155 aa1.91□□□□□ -2.1
CFT1YDR301W VID30P53076 958 aa1.91□□□□□ -2.1
CFT1YDR301W CAF130P53280 1122 aaPredicted RBP1.91□□□□□ -2.1
CFT1YDR301W CSM3Q04659 317 aa1.91□□□□□ -2.1
CFT1YDR301W VMA2P16140 517 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W VPS1P21576 704 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W UBP11P36026 717 aa1.91□□□□□ -2.1
CFT1YDR301W ISW1P38144 1129 aa1.91□□□□□ -2.1
CFT1YDR301W SDS3P40505 327 aa1.91□□□□□ -2.1
CFT1YDR301W EPL1P43572 832 aa1.91□□□□□ -2.1
CFT1YDR301W YGR130CP53278 816 aa1.91□□□□□ -2.1
CFT1YDR301W BNI5P53890 448 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W ROD1Q02805 837 aa1.91□□□□□ -2.1
CFT1YDR301W SEN54Q02825 467 aaPredicted RBP1.91□□□□□ -2.1
CFT1YDR301W COG4Q06096 861 aa1.91□□□□□ -2.1
CFT1YDR301W UTP4Q06679 776 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W SLK19Q08581 821 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W CDC53Q12018 815 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W YEL076C-AP0CX16 216 aa1.91□□□□□ -2.1
CFT1YDR301W YLR464WP0CX17 216 aa1.91□□□□□ -2.1
CFT1YDR301W AFT1P22149 690 aa1.91□□□□□ -2.1
CFT1YDR301W MCM4P30665 933 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W DPH2P32461 534 aa1.91□□□□□ -2.1
CFT1YDR301W UTR4P32626 227 aa1.91□□□□□ -2.1
CFT1YDR301W TVP38P36164 337 aa1.91□□□□□ -2.1
CFT1YDR301W UBP14P38237 781 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W NPR3P38742 1146 aa1.91□□□□□ -2.1
CFT1YDR301W YAP1801P38856 637 aa1.91□□□□□ -2.1
CFT1YDR301W RVS167P39743 482 aaKnown RBP1.91□□□□□ -2.1
CFT1YDR301W YEL076CP39971 216 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms