RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C HMLALPHA2P0CY09 210 aa2.53□□□□□ -2
SSD1YDR293C KAR1P11927 433 aa2.53□□□□□ -2
SSD1YDR293C RAD27P26793 382 aa2.53□□□□□ -2
SSD1YDR293C SPT16P32558 1035 aaKnown RBP2.53□□□□□ -2
SSD1YDR293C BMH2P34730 273 aaKnown RBP2.53□□□□□ -2
SSD1YDR293C RKM3P38222 552 aa2.53□□□□□ -2
SSD1YDR293C MAL13P53338 473 aa2.53□□□□□ -2
SSD1YDR293C SPN1Q06505 410 aaPredicted RBP2.53□□□□□ -2
SSD1YDR293C IMH1Q06704 911 aaKnown RBP2.53□□□□□ -2
SSD1YDR293C FRA1Q07825 749 aa2.53□□□□□ -2
SSD1YDR293C PLP2Q12017 286 aa2.53□□□□□ -2
SSD1YDR293C MPD2Q99316 277 aa2.53□□□□□ -2
SSD1YDR293C Q0182Q9ZZW1 134 aa2.53□□□□□ -2
SSD1YDR293C SWI1P09547 1314 aa2.53□□□□□ -2
SSD1YDR293C SEC2P17065 759 aa2.53□□□□□ -2
SSD1YDR293C PTC4P38089 393 aa2.53□□□□□ -2
SSD1YDR293C SLN1P39928 1220 aaPredicted RBP2.53□□□□□ -2
SSD1YDR293C ERV41Q04651 352 aa2.53□□□□□ -2
SSD1YDR293C IRC3Q06683 689 aa2.53□□□□□ -2
SSD1YDR293C PEX19Q07418 342 aa2.53□□□□□ -2
SSD1YDR293C PSH1Q12161 406 aa2.53□□□□□ -2
SSD1YDR293C CCP1P00431 361 aa2.53□□□□□ -2.01
SSD1YDR293C PHO4P07270 312 aaKnown RBP2.53□□□□□ -2.01
SSD1YDR293C NUP133P36161 1157 aa2.53□□□□□ -2.01
SSD1YDR293C TRX2P22803 104 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C MRC1P25588 1096 aa2.52□□□□□ -2.01
SSD1YDR293C BMH1P29311 267 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C SWE1P32944 819 aa2.52□□□□□ -2.01
SSD1YDR293C YBR184WP38299 523 aa2.52□□□□□ -2.01
SSD1YDR293C TOM71P38825 639 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C YPT11P48559 417 aa2.52□□□□□ -2.01
SSD1YDR293C HRQ1Q05549 1077 aa2.52□□□□□ -2.01
SSD1YDR293C BDF2Q07442 638 aa2.52□□□□□ -2.01
SSD1YDR293C BUG1Q12191 341 aa2.52□□□□□ -2.01
SSD1YDR293C TIP41Q12199 356 aa2.52□□□□□ -2.01
SSD1YDR293C SRF1Q12516 437 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-DR4O74302 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-HP0C2I4 478 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C TY1A-AP0CX57 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-PR1P0CX58 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-ORP0CX59 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-PR2P0CX60 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-DR5P0CX65 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-ER2P0CX66 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-GR3P0CX67 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-LR1P0CX68 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-MR2P0CX69 440 aa2.52□□□□□ -2.01
SSD1YDR293C MCM5P29496 775 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C RRM3P38766 723 aa2.52□□□□□ -2.01
SSD1YDR293C UBP9P39967 754 aa2.52□□□□□ -2.01
SSD1YDR293C MRPS18P42847 217 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-JR2P47099 440 aa2.52□□□□□ -2.01
SSD1YDR293C ACF4P47129 309 aa2.52□□□□□ -2.01
SSD1YDR293C NAF1P53919 492 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C TY1A-DR1Q03856 440 aa2.52□□□□□ -2.01
SSD1YDR293C SND1Q04007 877 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-ML1Q04706 440 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C ENT2Q05785 613 aa2.52□□□□□ -2.01
SSD1YDR293C RIM20Q12033 661 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-BRQ12217 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-NL2Q12470 440 aa2.52□□□□□ -2.01
SSD1YDR293C TY1A-GR2Q12485 440 aa2.52□□□□□ -2.01
SSD1YDR293C NBL1Q3E7Y6 73 aa2.52□□□□□ -2.01
SSD1YDR293C RPB2P08518 1224 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C PEP3P27801 918 aa2.52□□□□□ -2.01
SSD1YDR293C RAD24P32641 659 aa2.52□□□□□ -2.01
SSD1YDR293C SEC6P32844 805 aa2.52□□□□□ -2.01
SSD1YDR293C BUD6P41697 788 aa2.52□□□□□ -2.01
SSD1YDR293C YJR107WP47145 328 aa2.52□□□□□ -2.01
SSD1YDR293C ALF1P53904 254 aa2.52□□□□□ -2.01
SSD1YDR293C KRE33P53914 1056 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C PKH1Q03407 766 aa2.52□□□□□ -2.01
SSD1YDR293C BUD20Q08004 166 aaPredicted RBP2.52□□□□□ -2.01
SSD1YDR293C NOP14Q99207 810 aaKnown RBP2.52□□□□□ -2.01
SSD1YDR293C GSC2P40989 1895 aa2.51□□□□□ -2.01
SSD1YDR293C PET123P17558 318 aa2.51□□□□□ -2.01
SSD1YDR293C STE11P23561 717 aa2.51□□□□□ -2.01
SSD1YDR293C PAT1P25644 796 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C PRX1P34227 261 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C MRPL10P36520 322 aa2.51□□□□□ -2.01
SSD1YDR293C ERP2P39704 215 aa2.51□□□□□ -2.01
SSD1YDR293C FIR1P40020 876 aa2.51□□□□□ -2.01
SSD1YDR293C ALR2P43553 858 aa2.51□□□□□ -2.01
SSD1YDR293C MSB3P48566 633 aaPredicted RBP2.51□□□□□ -2.01
SSD1YDR293C SEC5P89102 971 aa2.51□□□□□ -2.01
SSD1YDR293C ESF1Q06344 628 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C OPY2Q06810 360 aa2.51□□□□□ -2.01
SSD1YDR293C OPI10Q08202 246 aa2.51□□□□□ -2.01
SSD1YDR293C FLC1Q08967 793 aa2.51□□□□□ -2.01
SSD1YDR293C ENT1Q12518 454 aa2.51□□□□□ -2.01
SSD1YDR293C CKA2P19454 339 aa2.51□□□□□ -2.01
SSD1YDR293C SRO9P25567 434 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C AAP1P37898 856 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C EFM2P38347 419 aa2.51□□□□□ -2.01
SSD1YDR293C RRP8P38961 392 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C VPS8P39702 1274 aa2.51□□□□□ -2.01
SSD1YDR293C COS5P47187 383 aa2.51□□□□□ -2.01
SSD1YDR293C RPA14P50106 137 aa2.51□□□□□ -2.01
SSD1YDR293C YML119WQ03208 357 aa2.51□□□□□ -2.01
SSD1YDR293C SYF1Q04048 859 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms