RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	MPH1	P40562	993 aa		6.59	□□□□□ -1.35
NSE3	YDR288W	MMM1	P41800	426 aa		6.59	□□□□□ -1.35
NSE3	YDR288W	NSE3	Q05541	303 aa		6.59	□□□□□ -1.35
NSE3	YDR288W	SPP382	Q06411	708 aa	Predicted RBP	6.59	□□□□□ -1.35
NSE3	YDR288W	GNT1	Q12096	491 aa		6.59	□□□□□ -1.35
NSE3	YDR288W	OSH2	Q12451	1283 aa		6.59	□□□□□ -1.35
NSE3	YDR288W	YBR184W	P38299	523 aa		6.58	□□□□□ -1.36
NSE3	YDR288W	GPB2	P39717	880 aa		6.58	□□□□□ -1.36
NSE3	YDR288W	ALT1	P52893	592 aa		6.58	□□□□□ -1.36
NSE3	YDR288W	FPR4	Q06205	392 aa	Predicted RBP	6.58	□□□□□ -1.36
NSE3	YDR288W	PUS7	Q08647	676 aa	Known RBP	6.58	□□□□□ -1.36
NSE3	YDR288W	SKN7	P38889	622 aa		6.57	□□□□□ -1.36
NSE3	YDR288W	IRR1	P40541	1150 aa		6.57	□□□□□ -1.36
NSE3	YDR288W	IOC3	P43596	787 aa		6.57	□□□□□ -1.36
NSE3	YDR288W	YJL045W	P47052	634 aa		6.57	□□□□□ -1.36
NSE3	YDR288W	MTC5	Q03897	1148 aa		6.57	□□□□□ -1.36
NSE3	YDR288W	MCA1	Q08601	432 aa		6.57	□□□□□ -1.36
NSE3	YDR288W	CHS2	P14180	963 aa		6.56	□□□□□ -1.36
NSE3	YDR288W	WHI3	P34761	661 aa	Known RBP	6.56	□□□□□ -1.36
NSE3	YDR288W	PBY1	P38254	753 aa		6.56	□□□□□ -1.36
NSE3	YDR288W	SAF1	P38352	637 aa		6.56	□□□□□ -1.36
NSE3	YDR288W	CIT3	P43635	486 aa		6.56	□□□□□ -1.36
NSE3	YDR288W	HUL5	P53119	910 aa		6.56	□□□□□ -1.36
NSE3	YDR288W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
NSE3	YDR288W	YOR059C	Q08448	450 aa	Known RBP	6.56	□□□□□ -1.36
NSE3	YDR288W	NSI1	Q12457	570 aa		6.56	□□□□□ -1.36
NSE3	YDR288W	MBP1	P39678	833 aa		6.55	□□□□□ -1.36
NSE3	YDR288W	OSW7	P43611	510 aa		6.55	□□□□□ -1.36
NSE3	YDR288W	YPL034W	Q03083	165 aa		6.55	□□□□□ -1.36
NSE3	YDR288W	BDF2	Q07442	638 aa		6.55	□□□□□ -1.36
NSE3	YDR288W	YPL066W	Q12194	479 aa		6.55	□□□□□ -1.36
NSE3	YDR288W	YER152C	P10356	443 aa		6.54	□□□□□ -1.36
NSE3	YDR288W	YGR125W	P53273	1036 aa		6.54	□□□□□ -1.36
NSE3	YDR288W	HOS3	Q02959	697 aa	Known RBP	6.54	□□□□□ -1.36
NSE3	YDR288W	EAR1	Q03212	550 aa		6.54	□□□□□ -1.36
NSE3	YDR288W	COQ4	O13525	335 aa		6.53	□□□□□ -1.36
NSE3	YDR288W	SBP1	P10080	294 aa	Known RBP	6.53	□□□□□ -1.36
NSE3	YDR288W	PRP9	P19736	530 aa	Known RBP	6.53	□□□□□ -1.36
NSE3	YDR288W	YSC84	P32793	468 aa		6.53	□□□□□ -1.36
NSE3	YDR288W	STE5	P32917	917 aa		6.53	□□□□□ -1.36
NSE3	YDR288W	YHL012W	P38709	493 aa		6.53	□□□□□ -1.36
NSE3	YDR288W	TAT2	P38967	592 aa		6.53	□□□□□ -1.36
NSE3	YDR288W	ERP6	P53198	216 aa		6.53	□□□□□ -1.36
NSE3	YDR288W	RCM1	P53972	490 aa		6.53	□□□□□ -1.36
NSE3	YDR288W	EAF1	Q06337	982 aa		6.53	□□□□□ -1.36
NSE3	YDR288W	HSP60	P19882	572 aa	Known RBP	6.52	□□□□□ -1.37
NSE3	YDR288W	MSB1	P21339	1137 aa	Known RBP	6.52	□□□□□ -1.37
NSE3	YDR288W	ARE1	P25628	610 aa		6.52	□□□□□ -1.37
NSE3	YDR288W	KAE1	P36132	386 aa		6.52	□□□□□ -1.37
NSE3	YDR288W	RPN3	P40016	523 aa	Known RBP	6.52	□□□□□ -1.37
NSE3	YDR288W	TNA1	P53322	534 aa		6.52	□□□□□ -1.37
NSE3	YDR288W	RPL8B	P29453	256 aa	Known RBP	6.51	□□□□□ -1.37
NSE3	YDR288W	TPO2	P53283	614 aa		6.51	□□□□□ -1.37
NSE3	YDR288W	FMP25	Q08023	583 aa		6.51	□□□□□ -1.37
NSE3	YDR288W	FLC1	Q08967	793 aa		6.51	□□□□□ -1.37
NSE3	YDR288W	YVC1	Q12324	675 aa		6.51	□□□□□ -1.37
NSE3	YDR288W	RPL11A	P0C0W9	174 aa	Known RBP	6.5	□□□□□ -1.37
NSE3	YDR288W	CCZ1	P38273	704 aa		6.5	□□□□□ -1.37
NSE3	YDR288W	MXR1	P40029	184 aa		6.5	□□□□□ -1.37
NSE3	YDR288W	ALR2	P43553	858 aa		6.5	□□□□□ -1.37
NSE3	YDR288W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.5	□□□□□ -1.37	not detected
NSE3	YDR288W	NBA1	Q08229	501 aa	Known RBP	6.5	□□□□□ -1.37
NSE3	YDR288W	RSB1	Q08417	382 aa		6.5	□□□□□ -1.37
NSE3	YDR288W	RPL11B	Q3E757	174 aa	Predicted RBP	6.5	□□□□□ -1.37
NSE3	YDR288W	SCT1	P32784	759 aa		6.49	□□□□□ -1.37
NSE3	YDR288W	SIP5	P40210	489 aa	Known RBP	6.49	□□□□□ -1.37
NSE3	YDR288W	HUL4	P40985	892 aa		6.49	□□□□□ -1.37
NSE3	YDR288W	RPN4	Q03465	531 aa		6.49	□□□□□ -1.37
NSE3	YDR288W	YDR306C	Q06640	478 aa		6.49	□□□□□ -1.37
NSE3	YDR288W	YLR122C	Q12312	125 aa		6.49	□□□□□ -1.37
NSE3	YDR288W	PPH3	P32345	308 aa		6.48	□□□□□ -1.37
NSE3	YDR288W	PPG1	P32838	368 aa		6.48	□□□□□ -1.37
NSE3	YDR288W	MDL2	P33311	773 aa		6.48	□□□□□ -1.37
NSE3	YDR288W	PGM1	P33401	570 aa	Known RBP	6.48	□□□□□ -1.37
NSE3	YDR288W	GEM1	P39722	662 aa		6.48	□□□□□ -1.37
NSE3	YDR288W	YGR130C	P53278	816 aa		6.48	□□□□□ -1.37
NSE3	YDR288W	ACM1	Q08981	209 aa		6.48	□□□□□ -1.37
NSE3	YDR288W	CIT1	P00890	479 aa		6.47	□□□□□ -1.37
NSE3	YDR288W	GAL11	P19659	1081 aa		6.47	□□□□□ -1.37
NSE3	YDR288W	AAR2	P32357	355 aa	Predicted RBP	6.47	□□□□□ -1.37
NSE3	YDR288W	CDC11	P32458	415 aa		6.47	□□□□□ -1.37
NSE3	YDR288W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.47	□□□□□ -1.37	not detected
NSE3	YDR288W	GGA2	P38817	585 aa	Known RBP	6.47	□□□□□ -1.37
NSE3	YDR288W	PNT1	P38969	423 aa		6.47	□□□□□ -1.37
NSE3	YDR288W	CHZ1	P40019	153 aa	Predicted RBP	6.47	□□□□□ -1.37
NSE3	YDR288W	DUS3	Q06053	668 aa	Known RBP	6.47	□□□□□ -1.37
NSE3	YDR288W	UBX5	Q06682	500 aa		6.47	□□□□□ -1.37
NSE3	YDR288W	TRE1	Q08919	783 aa		6.47	□□□□□ -1.37
NSE3	YDR288W	THS1	P04801	734 aa	Known RBP	6.46	□□□□□ -1.38
NSE3	YDR288W	DBP2	P24783	546 aa	Known RBP	6.46	□□□□□ -1.38
NSE3	YDR288W	SRO9	P25567	434 aa	Known RBP	6.46	□□□□□ -1.38
NSE3	YDR288W	CCC2	P38995	1004 aa		6.46	□□□□□ -1.38
NSE3	YDR288W	RSP5	P39940	809 aa	Known RBP	6.46	□□□□□ -1.38
NSE3	YDR288W	PFD1	P46988	109 aa		6.46	□□□□□ -1.38
NSE3	YDR288W	UTP8	P53276	713 aa	Known RBP	6.46	□□□□□ -1.38
NSE3	YDR288W	SRP1	Q02821	542 aa	Known RBP	6.46	□□□□□ -1.38
NSE3	YDR288W	PRO1	P32264	428 aa		6.45	□□□□□ -1.38
NSE3	YDR288W	UGA2	P38067	497 aa		6.45	□□□□□ -1.38
NSE3	YDR288W	YHR020W	P38708	688 aa	Known RBP	6.45	□□□□□ -1.38
NSE3	YDR288W	PIK1	P39104	1066 aa		6.45	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms