RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W PFK1P16861 987 aaKnown RBP2.51□□□□□ -2.01
SIR4YDR227W MCM7P38132 845 aa2.51□□□□□ -2.01
SIR4YDR227W GEM1P39722 662 aa2.51□□□□□ -2.01
SIR4YDR227W PEX14P53112 341 aa2.51□□□□□ -2.01
SIR4YDR227W KXD1P53158 218 aa2.51□□□□□ -2.01
SIR4YDR227W ENV11P53246 860 aa2.51□□□□□ -2.01
SIR4YDR227W SPC19Q03954 165 aa2.51□□□□□ -2.01
SIR4YDR227W SAS4Q04003 481 aa2.51□□□□□ -2.01
SIR4YDR227W YPR097WQ06839 1073 aa2.51□□□□□ -2.01
SIR4YDR227W CAF20P12962 161 aaKnown RBP2.51□□□□□ -2.01
SIR4YDR227W VAN1P23642 535 aa2.51□□□□□ -2.01
SIR4YDR227W ERG7P38604 731 aa2.51□□□□□ -2.01
SIR4YDR227W SOH1P38633 127 aa2.51□□□□□ -2.01
SIR4YDR227W YJL055WP47044 245 aa2.51□□□□□ -2.01
SIR4YDR227W TLG2Q08144 397 aa2.51□□□□□ -2.01
SIR4YDR227W YML133CQ03099 1374 aa2.51□□□□□ -2.01
SIR4YDR227W TRP5P00931 707 aaKnown RBP2.51□□□□□ -2.01
SIR4YDR227W BI4P03879 638 aa2.51□□□□□ -2.01
SIR4YDR227W RAD2P07276 1031 aa2.51□□□□□ -2.01
SIR4YDR227W FUN30P31380 1131 aa2.51□□□□□ -2.01
SIR4YDR227W GRX4P32642 244 aa2.51□□□□□ -2.01
SIR4YDR227W PCA1P38360 1216 aa2.51□□□□□ -2.01
SIR4YDR227W TY1B-AO13527 1196 aaKnown RBP2.5□□□□□ -2.01
SIR4YDR227W APL2P36000 726 aaPredicted RBP2.5□□□□□ -2.01
SIR4YDR227W GPT2P36148 743 aa2.5□□□□□ -2.01
SIR4YDR227W YKR075CP36155 307 aa2.5□□□□□ -2.01
SIR4YDR227W LYS14P40971 790 aa2.5□□□□□ -2.01
SIR4YDR227W CEF1Q03654 590 aaPredicted RBP2.5□□□□□ -2.01
SIR4YDR227W MRL1Q06815 381 aa2.5□□□□□ -2.01
SIR4YDR227W CFT2Q12102 859 aaPredicted RBP2.5□□□□□ -2.01
SIR4YDR227W MPH3P0CE00 602 aa2.5□□□□□ -2.01
SIR4YDR227W PER1P25625 357 aa2.5□□□□□ -2.01
SIR4YDR227W DPB3P27344 201 aa2.5□□□□□ -2.01
SIR4YDR227W MRF1P30775 413 aaPredicted RBP2.5□□□□□ -2.01
SIR4YDR227W PEX6P33760 1030 aa2.5□□□□□ -2.01
SIR4YDR227W TPS3P38426 1054 aaKnown RBP2.5□□□□□ -2.01
SIR4YDR227W RGA1P39083 1007 aa2.5□□□□□ -2.01
SIR4YDR227W COX6P00427 148 aa2.5□□□□□ -2.01
SIR4YDR227W TOM70P07213 617 aaKnown RBP2.5□□□□□ -2.01
SIR4YDR227W SSH4P32343 579 aa2.5□□□□□ -2.01
SIR4YDR227W SMY2P32909 740 aaKnown RBP2.5□□□□□ -2.01
SIR4YDR227W SAH1P39954 449 aaKnown RBP2.5□□□□□ -2.01
SIR4YDR227W YEL068CP39977 110 aa2.5□□□□□ -2.01
SIR4YDR227W MDJ2P42834 146 aa2.5□□□□□ -2.01
SIR4YDR227W CWH41P53008 833 aa2.5□□□□□ -2.01
SIR4YDR227W MON1P53129 644 aa2.5□□□□□ -2.01
SIR4YDR227W SEC5P89102 971 aa2.5□□□□□ -2.01
SIR4YDR227W GCR2Q01722 534 aa2.5□□□□□ -2.01
SIR4YDR227W NAN1Q02931 896 aaKnown RBP2.5□□□□□ -2.01
SIR4YDR227W HCR1Q05775 265 aaKnown RBP2.5□□□□□ -2.01
SIR4YDR227W TSR2Q06672 205 aaKnown RBP2.5□□□□□ -2.01
SIR4YDR227W HSP42Q12329 375 aa2.5□□□□□ -2.01
SIR4YDR227W HSH49Q99181 213 aaPredicted RBP2.5□□□□□ -2.01
SIR4YDR227W SEC18P18759 758 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W STE4P18851 423 aa2.49□□□□□ -2.01
SIR4YDR227W AFT1P22149 690 aa2.49□□□□□ -2.01
SIR4YDR227W PGS1P25578 521 aa2.49□□□□□ -2.01
SIR4YDR227W VPS35P34110 944 aa2.49□□□□□ -2.01
SIR4YDR227W BOI1P38041 980 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W YBR284WP38150 797 aa2.49□□□□□ -2.01
SIR4YDR227W RIM4P38741 713 aa2.49□□□□□ -2.01
SIR4YDR227W MNT3P40549 630 aa2.49□□□□□ -2.01
SIR4YDR227W SAM37P50110 327 aa2.49□□□□□ -2.01
SIR4YDR227W HEH2Q03281 663 aa2.49□□□□□ -2.01
SIR4YDR227W PEX29Q03370 554 aa2.49□□□□□ -2.01
SIR4YDR227W YDR344CQ05510 147 aa2.49□□□□□ -2.01
SIR4YDR227W GRE2Q12068 342 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W TY4B-JP47024 1803 aa2.49□□□□□ -2.01
SIR4YDR227W RAD18P10862 487 aa2.49□□□□□ -2.01
SIR4YDR227W BRF1P29056 596 aa2.49□□□□□ -2.01
SIR4YDR227W CHS3P29465 1165 aa2.49□□□□□ -2.01
SIR4YDR227W SEC21P32074 935 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W PSE1P32337 1089 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W EBP2P36049 427 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W MUM2P38236 366 aa2.49□□□□□ -2.01
SIR4YDR227W TMA108P40462 946 aa2.49□□□□□ -2.01
SIR4YDR227W MID1P41821 548 aa2.49□□□□□ -2.01
SIR4YDR227W NIS1P53939 407 aa2.49□□□□□ -2.01
SIR4YDR227W YPR148CQ06523 435 aa2.49□□□□□ -2.01
SIR4YDR227W ALR1Q08269 859 aa2.49□□□□□ -2.01
SIR4YDR227W DAT1P13483 248 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W SNA3P14359 133 aa2.49□□□□□ -2.01
SIR4YDR227W GRR1P24814 1151 aa2.49□□□□□ -2.01
SIR4YDR227W ZIM17P42844 174 aa2.49□□□□□ -2.01
SIR4YDR227W LSB6P42951 607 aa2.49□□□□□ -2.01
SIR4YDR227W ALR2P43553 858 aa2.49□□□□□ -2.01
SIR4YDR227W TAF1P46677 1066 aa2.49□□□□□ -2.01
SIR4YDR227W FYV8P46949 817 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W RPT6Q01939 405 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W YML082WQ04533 649 aaKnown RBP2.49□□□□□ -2.01
SIR4YDR227W CLP1Q08685 445 aaPredicted RBP2.49□□□□□ -2.01
SIR4YDR227W COBP00163 385 aa2.48□□□□□ -2.01
SIR4YDR227W DPS1P04802 557 aaKnown RBP2.48□□□□□ -2.01
SIR4YDR227W MPH2P0CD99 609 aa2.48□□□□□ -2.01
SIR4YDR227W DBF4P32325 704 aa2.48□□□□□ -2.01
SIR4YDR227W MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
SIR4YDR227W AFG3P39925 761 aa2.48□□□□□ -2.01
SIR4YDR227W HXT8P40886 569 aa2.48□□□□□ -2.01
SIR4YDR227W ARH1P48360 493 aa2.48□□□□□ -2.01
SIR4YDR227W MER1P16523 270 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 932.3 ms