RNA–Protein interactions for RNA: YDR176W

NGG1, Transcript of Subunit of chromatin modifying histone acetyltransferase complexes, yeast

Gene NGG1, Length 2,109 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGG1	YDR176W	OYE3	P41816	400 aa	Predicted RBP	4.95	□□□□□ -1.62
NGG1	YDR176W	YGL176C	P46945	554 aa		4.95	□□□□□ -1.62
NGG1	YDR176W	RCM1	P53972	490 aa		4.95	□□□□□ -1.62
NGG1	YDR176W	YOR059C	Q08448	450 aa	Known RBP	4.95	□□□□□ -1.62
NGG1	YDR176W	RKM4	Q12504	494 aa		4.95	□□□□□ -1.62
NGG1	YDR176W	YSC84	P32793	468 aa		4.94	□□□□□ -1.62
NGG1	YDR176W	TDA5	Q06417	326 aa	Known RBP	4.94	□□□□□ -1.62
NGG1	YDR176W	GNT1	Q12096	491 aa		4.94	□□□□□ -1.62
NGG1	YDR176W	TRP3	P00937	484 aa		4.94	□□□□□ -1.62
NGG1	YDR176W	SAM35	P14693	329 aa		4.94	□□□□□ -1.62
NGG1	YDR176W	YKL107W	P34251	309 aa		4.94	□□□□□ -1.62
NGG1	YDR176W	VBA5	P36172	582 aa		4.94	□□□□□ -1.62
NGG1	YDR176W	NNF1	P47149	201 aa		4.94	□□□□□ -1.62
NGG1	YDR176W	SBA1	P28707	216 aa	Known RBP	4.93	□□□□□ -1.62
NGG1	YDR176W	STE5	P32917	917 aa		4.93	□□□□□ -1.62
NGG1	YDR176W	RCL1	Q08096	367 aa	Predicted RBP	4.93	□□□□□ -1.62
NGG1	YDR176W	GCD1	P09032	578 aa	Predicted RBP	4.93	□□□□□ -1.62
NGG1	YDR176W	PEX7	P39108	375 aa		4.93	□□□□□ -1.62
NGG1	YDR176W	SIP5	P40210	489 aa	Known RBP	4.93	□□□□□ -1.62
NGG1	YDR176W	YFL054C	P43549	646 aa		4.93	□□□□□ -1.62
NGG1	YDR176W	SHE9	Q04172	456 aa		4.93	□□□□□ -1.62
NGG1	YDR176W	DBP2	P24783	546 aa	Known RBP	4.92	□□□□□ -1.62
NGG1	YDR176W	YKR073C	P36153	106 aa		4.92	□□□□□ -1.62
NGG1	YDR176W	YHL012W	P38709	493 aa		4.92	□□□□□ -1.62
NGG1	YDR176W	RPN3	P40016	523 aa	Known RBP	4.92	□□□□□ -1.62
NGG1	YDR176W	HOS3	Q02959	697 aa	Known RBP	4.92	□□□□□ -1.62
NGG1	YDR176W	RGA2	Q06407	1009 aa		4.92	□□□□□ -1.62
NGG1	YDR176W	CYC7	P00045	113 aa		4.91	□□□□□ -1.62
NGG1	YDR176W	RPL11A	P0C0W9	174 aa	Known RBP	4.91	□□□□□ -1.62
NGG1	YDR176W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
NGG1	YDR176W	BAP2	P38084	609 aa		4.91	□□□□□ -1.62
NGG1	YDR176W	MBP1	P39678	833 aa		4.91	□□□□□ -1.62
NGG1	YDR176W	MXR1	P40029	184 aa		4.91	□□□□□ -1.62
NGG1	YDR176W	TRE1	Q08919	783 aa		4.91	□□□□□ -1.62
NGG1	YDR176W	RPL11B	Q3E757	174 aa	Predicted RBP	4.91	□□□□□ -1.62
NGG1	YDR176W	SNF5	P18480	905 aa		4.91	□□□□□ -1.62
NGG1	YDR176W	YBR184W	P38299	523 aa		4.9	□□□□□ -1.62
NGG1	YDR176W	PNT1	P38969	423 aa		4.9	□□□□□ -1.62
NGG1	YDR176W	KRI1	P42846	591 aa	Known RBP	4.9	□□□□□ -1.62
NGG1	YDR176W	IOC3	P43596	787 aa		4.9	□□□□□ -1.62
NGG1	YDR176W	YJL049W	P47048	450 aa		4.9	□□□□□ -1.62
NGG1	YDR176W	SPP382	Q06411	708 aa	Predicted RBP	4.9	□□□□□ -1.62
NGG1	YDR176W	TNA1	P53322	534 aa		4.9	□□□□□ -1.63
NGG1	YDR176W	MED7	Q08278	222 aa		4.9	□□□□□ -1.63
NGG1	YDR176W	YOL098C	Q12496	1037 aa		4.9	□□□□□ -1.63
NGG1	YDR176W	MRP8	P35719	219 aa		4.89	□□□□□ -1.63
NGG1	YDR176W	IRR1	P40541	1150 aa		4.89	□□□□□ -1.63
NGG1	YDR176W	SDH1	Q00711	640 aa		4.89	□□□□□ -1.63
NGG1	YDR176W	NAN1	Q02931	896 aa	Known RBP	4.89	□□□□□ -1.63
NGG1	YDR176W	RAD4	P14736	754 aa		4.88	□□□□□ -1.63
NGG1	YDR176W	SRO9	P25567	434 aa	Known RBP	4.88	□□□□□ -1.63
NGG1	YDR176W	MDL2	P33311	773 aa		4.88	□□□□□ -1.63
NGG1	YDR176W	PFD1	P46988	109 aa		4.88	□□□□□ -1.63
NGG1	YDR176W	ALO1	P54783	526 aa	Known RBP	4.88	□□□□□ -1.63
NGG1	YDR176W	SSY1	Q03770	852 aa		4.88	□□□□□ -1.63
NGG1	YDR176W	COQ4	O13525	335 aa		4.88	□□□□□ -1.63
NGG1	YDR176W	PRO1	P32264	428 aa		4.88	□□□□□ -1.63
NGG1	YDR176W	TOS1	P38288	455 aa		4.88	□□□□□ -1.63
NGG1	YDR176W	PTC7	P38797	343 aa		4.88	□□□□□ -1.63
NGG1	YDR176W	SNF7	P39929	240 aa	Known RBP	4.88	□□□□□ -1.63
NGG1	YDR176W	ORC1	P54784	914 aa	Predicted RBP	4.88	□□□□□ -1.63
NGG1	YDR176W	GTS1	P40956	396 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	NSE3	Q05541	303 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	BDF2	Q07442	638 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	RSC58	Q07979	502 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	NSI1	Q12457	570 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	SBP1	P10080	294 aa	Known RBP	4.87	□□□□□ -1.63
NGG1	YDR176W	SLA2	P33338	968 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	UGA2	P38067	497 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	PBY1	P38254	753 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	CCZ1	P38273	704 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	PIK1	P39104	1066 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	ACM1	Q08981	209 aa		4.87	□□□□□ -1.63
NGG1	YDR176W	YHR020W	P38708	688 aa	Known RBP	4.86	□□□□□ -1.63
NGG1	YDR176W	CTH1	P47976	325 aa		4.86	□□□□□ -1.63
NGG1	YDR176W	HUL5	P53119	910 aa		4.86	□□□□□ -1.63
NGG1	YDR176W	FMP25	Q08023	583 aa		4.86	□□□□□ -1.63
NGG1	YDR176W	ADP1	P25371	1049 aa		4.85	□□□□□ -1.63
NGG1	YDR176W	TIM54	P47045	478 aa		4.85	□□□□□ -1.63
NGG1	YDR176W	INP52	P50942	1183 aa		4.85	□□□□□ -1.63
NGG1	YDR176W	YTA7	P40340	1379 aa		4.85	□□□□□ -1.63
NGG1	YDR176W	RPL8B	P29453	256 aa	Known RBP	4.85	□□□□□ -1.63
NGG1	YDR176W	AIM26	P32858	118 aa		4.85	□□□□□ -1.63
NGG1	YDR176W	GEM1	P39722	662 aa		4.85	□□□□□ -1.63
NGG1	YDR176W	NBA1	Q08229	501 aa	Known RBP	4.85	□□□□□ -1.63
NGG1	YDR176W	CDC53	Q12018	815 aa	Known RBP	4.85	□□□□□ -1.63
NGG1	YDR176W	LPX1	Q12405	387 aa	Known RBP	4.85	□□□□□ -1.63
NGG1	YDR176W	GLT1	Q12680	2145 aa	Known RBP	4.85	□□□□□ -1.63
NGG1	YDR176W	SRP40	P32583	406 aa	Predicted RBP	4.84	□□□□□ -1.63
NGG1	YDR176W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
NGG1	YDR176W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	RIP-Chip
NGG1	YDR176W	BRE4	Q07660	1125 aa		4.84	□□□□□ -1.63
NGG1	YDR176W	SPO75	Q07798	868 aa		4.84	□□□□□ -1.63
NGG1	YDR176W	BI4	P03879	638 aa		4.84	□□□□□ -1.64
NGG1	YDR176W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
NGG1	YDR176W	YKL151C	P36059	337 aa		4.84	□□□□□ -1.64
NGG1	YDR176W	OMA1	P36163	345 aa		4.83	□□□□□ -1.64
NGG1	YDR176W	EAF1	Q06337	982 aa		4.83	□□□□□ -1.64
NGG1	YDR176W	FLC1	Q08967	793 aa		4.83	□□□□□ -1.64
NGG1	YDR176W	HBS1	P32769	611 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms