RNA–Protein interactions for RNA: YDR100W

TVP15, Transcript of Integral membrane protein, yeast

Gene TVP15, Length 432 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TVP15	YDR100W	SBA1	P28707	216 aa	Known RBP	4.9	□□□□□ -1.63
TVP15	YDR100W	KIP1	P28742	1111 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	YKL107W	P34251	309 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	OMA1	P36163	345 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	VBA5	P36172	582 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	TAT2	P38967	592 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	GPB2	P39717	880 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	MPH1	P40562	993 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	HNT2	P49775	206 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	NSE3	Q05541	303 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	CDC53	Q12018	815 aa	Known RBP	4.9	□□□□□ -1.63
TVP15	YDR100W	YPL066W	Q12194	479 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	RKM4	Q12504	494 aa		4.9	□□□□□ -1.63
TVP15	YDR100W	CYC7	P00045	113 aa		4.89	□□□□□ -1.63
TVP15	YDR100W	YKL091C	P33324	310 aa	Known RBP	4.89	□□□□□ -1.63
TVP15	YDR100W	TOS1	P38288	455 aa		4.89	□□□□□ -1.63
TVP15	YDR100W	YBR184W	P38299	523 aa		4.89	□□□□□ -1.63
TVP15	YDR100W	ALT1	P52893	592 aa		4.89	□□□□□ -1.63
TVP15	YDR100W	TPP1	Q03796	238 aa		4.89	□□□□□ -1.63
TVP15	YDR100W	SHE9	Q04172	456 aa		4.89	□□□□□ -1.63
TVP15	YDR100W	MED7	Q08278	222 aa		4.89	□□□□□ -1.63
TVP15	YDR100W	SPO21	Q12411	609 aa		4.89	□□□□□ -1.63
TVP15	YDR100W	GCD1	P09032	578 aa	Predicted RBP	4.88	□□□□□ -1.63
TVP15	YDR100W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
TVP15	YDR100W	MSB1	P21339	1137 aa	Known RBP	4.88	□□□□□ -1.63
TVP15	YDR100W	STE5	P32917	917 aa		4.88	□□□□□ -1.63
TVP15	YDR100W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
TVP15	YDR100W	MRP8	P35719	219 aa		4.88	□□□□□ -1.63
TVP15	YDR100W	MMM1	P41800	426 aa		4.88	□□□□□ -1.63
TVP15	YDR100W	TIM54	P47045	478 aa		4.88	□□□□□ -1.63
TVP15	YDR100W	YJL045W	P47052	634 aa		4.88	□□□□□ -1.63
TVP15	YDR100W	INP52	P50942	1183 aa		4.88	□□□□□ -1.63
TVP15	YDR100W	PUS7	Q08647	676 aa	Known RBP	4.88	□□□□□ -1.63
TVP15	YDR100W	HRK1	Q08732	759 aa	Known RBP	4.88	□□□□□ -1.63
TVP15	YDR100W	YPL260W	Q08977	551 aa		4.88	□□□□□ -1.63
TVP15	YDR100W	YER152C	P10356	443 aa		4.87	□□□□□ -1.63
TVP15	YDR100W	MAC1	P35192	417 aa		4.87	□□□□□ -1.63
TVP15	YDR100W	MBP1	P39678	833 aa		4.87	□□□□□ -1.63
TVP15	YDR100W	SNF7	P39929	240 aa	Known RBP	4.87	□□□□□ -1.63
TVP15	YDR100W	IRR1	P40541	1150 aa		4.87	□□□□□ -1.63
TVP15	YDR100W	HUL5	P53119	910 aa		4.87	□□□□□ -1.63
TVP15	YDR100W	SDH1	Q00711	640 aa		4.87	□□□□□ -1.63
TVP15	YDR100W	BDF2	Q07442	638 aa		4.87	□□□□□ -1.63
TVP15	YDR100W	GNT1	Q12096	491 aa		4.87	□□□□□ -1.63
TVP15	YDR100W	CIT3	P43635	486 aa		4.86	□□□□□ -1.63
TVP15	YDR100W	CTH1	P47976	325 aa		4.86	□□□□□ -1.63
TVP15	YDR100W	RCM1	P53972	490 aa		4.86	□□□□□ -1.63
TVP15	YDR100W	SPP382	Q06411	708 aa	Predicted RBP	4.86	□□□□□ -1.63
TVP15	YDR100W	SPO75	Q07798	868 aa		4.86	□□□□□ -1.63
TVP15	YDR100W	YOR131C	Q12486	218 aa		4.86	□□□□□ -1.63
TVP15	YDR100W	AIM44	Q99299	758 aa		4.86	□□□□□ -1.63
TVP15	YDR100W	LIP5	P32875	414 aa		4.85	□□□□□ -1.63
TVP15	YDR100W	PBY1	P38254	753 aa		4.85	□□□□□ -1.63
TVP15	YDR100W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
TVP15	YDR100W	FPR4	Q06205	392 aa	Predicted RBP	4.85	□□□□□ -1.63
TVP15	YDR100W	RPL8B	P29453	256 aa	Known RBP	4.84	□□□□□ -1.63
TVP15	YDR100W	YSC84	P32793	468 aa		4.84	□□□□□ -1.63
TVP15	YDR100W	SIP5	P40210	489 aa	Known RBP	4.84	□□□□□ -1.63
TVP15	YDR100W	OYE3	P41816	400 aa	Predicted RBP	4.84	□□□□□ -1.63
TVP15	YDR100W	YGR125W	P53273	1036 aa		4.84	□□□□□ -1.63
TVP15	YDR100W	HOS3	Q02959	697 aa	Known RBP	4.84	□□□□□ -1.63
TVP15	YDR100W	BRE4	Q07660	1125 aa		4.84	□□□□□ -1.63
TVP15	YDR100W	FMP25	Q08023	583 aa		4.84	□□□□□ -1.63
TVP15	YDR100W	YVC1	Q12324	675 aa		4.84	□□□□□ -1.63
TVP15	YDR100W	OSH2	Q12451	1283 aa		4.84	□□□□□ -1.63
TVP15	YDR100W	RPL11A	P0C0W9	174 aa	Known RBP	4.83	□□□□□ -1.64
TVP15	YDR100W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	RIP-Chip
TVP15	YDR100W	RPN3	P40016	523 aa	Known RBP	4.83	□□□□□ -1.64
TVP15	YDR100W	MXR1	P40029	184 aa		4.83	□□□□□ -1.64
TVP15	YDR100W	RPN4	Q03465	531 aa		4.83	□□□□□ -1.64
TVP15	YDR100W	EAF1	Q06337	982 aa		4.83	□□□□□ -1.64
TVP15	YDR100W	FLC1	Q08967	793 aa		4.83	□□□□□ -1.64
TVP15	YDR100W	RPL11B	Q3E757	174 aa	Predicted RBP	4.83	□□□□□ -1.64
TVP15	YDR100W	DBP2	P24783	546 aa	Known RBP	4.82	□□□□□ -1.64
TVP15	YDR100W	ARE1	P25628	610 aa		4.82	□□□□□ -1.64
TVP15	YDR100W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
TVP15	YDR100W	YHL012W	P38709	493 aa		4.82	□□□□□ -1.64
TVP15	YDR100W	PNT1	P38969	423 aa		4.82	□□□□□ -1.64
TVP15	YDR100W	YFL054C	P43549	646 aa		4.82	□□□□□ -1.64
TVP15	YDR100W	PFD1	P46988	109 aa		4.82	□□□□□ -1.64
TVP15	YDR100W	TNA1	P53322	534 aa		4.82	□□□□□ -1.64
TVP15	YDR100W	YOR059C	Q08448	450 aa	Known RBP	4.82	□□□□□ -1.64
TVP15	YDR100W	COQ4	O13525	335 aa		4.81	□□□□□ -1.64
TVP15	YDR100W	CIT1	P00890	479 aa		4.81	□□□□□ -1.64
TVP15	YDR100W	CIT2	P08679	460 aa		4.81	□□□□□ -1.64
TVP15	YDR100W	HSP60	P19882	572 aa	Known RBP	4.81	□□□□□ -1.64
TVP15	YDR100W	YHR020W	P38708	688 aa	Known RBP	4.81	□□□□□ -1.64
TVP15	YDR100W	RSP5	P39940	809 aa	Known RBP	4.81	□□□□□ -1.64
TVP15	YDR100W	ALR2	P43553	858 aa		4.81	□□□□□ -1.64
TVP15	YDR100W	ERP6	P53198	216 aa		4.81	□□□□□ -1.64
TVP15	YDR100W	UBX5	Q06682	500 aa		4.81	□□□□□ -1.64
TVP15	YDR100W	RCL1	Q08096	367 aa	Predicted RBP	4.81	□□□□□ -1.64
TVP15	YDR100W	PRP9	P19736	530 aa	Known RBP	4.8	□□□□□ -1.64
TVP15	YDR100W	PEX7	P39108	375 aa		4.8	□□□□□ -1.64
TVP15	YDR100W	BUD6	P41697	788 aa		4.8	□□□□□ -1.64
TVP15	YDR100W	OSW7	P43611	510 aa		4.8	□□□□□ -1.64
TVP15	YDR100W	SSY1	Q03770	852 aa		4.8	□□□□□ -1.64
TVP15	YDR100W	YDR306C	Q06640	478 aa		4.8	□□□□□ -1.64
TVP15	YDR100W	TRE1	Q08919	783 aa		4.8	□□□□□ -1.64
TVP15	YDR100W	NSI1	Q12457	570 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 175.2 ms