RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C ATG13Q06628 738 aa2.22□□□□□ -2.05
MSH6YDR097C KAR2P16474 682 aaKnown RBP2.22□□□□□ -2.05
MSH6YDR097C STE5P32917 917 aa2.22□□□□□ -2.05
MSH6YDR097C SHM1P37292 490 aaPredicted RBP2.22□□□□□ -2.05
MSH6YDR097C EEB1Q02891 456 aa2.22□□□□□ -2.05
MSH6YDR097C CAN1P04817 590 aa2.21□□□□□ -2.05
MSH6YDR097C VBA5P36172 582 aa2.21□□□□□ -2.05
MSH6YDR097C AHP1P38013 176 aaKnown RBP2.21□□□□□ -2.05
MSH6YDR097C YAP1801P38856 637 aa2.21□□□□□ -2.05
MSH6YDR097C MSB3P48566 633 aaPredicted RBP2.21□□□□□ -2.05
MSH6YDR097C RPP2BP02400 110 aaKnown RBP2.21□□□□□ -2.06
MSH6YDR097C YGL176CP46945 554 aa2.21□□□□□ -2.06
MSH6YDR097C TY1A-DR3Q12441 440 aa2.21□□□□□ -2.06
MSH6YDR097C NOP14Q99207 810 aaKnown RBP2.21□□□□□ -2.06
MSH6YDR097C AAR2P32357 355 aaPredicted RBP2.21□□□□□ -2.06
MSH6YDR097C NAB2P32505 525 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
MSH6YDR097C PEX28P38848 579 aa2.21□□□□□ -2.06
MSH6YDR097C RTA1P53047 317 aa2.21□□□□□ -2.06
MSH6YDR097C HIM1Q06674 414 aa2.21□□□□□ -2.06
MSH6YDR097C YOR296WQ08748 1289 aa2.21□□□□□ -2.06
MSH6YDR097C MCD1Q12158 566 aa2.21□□□□□ -2.06
MSH6YDR097C HIR1P32479 840 aa2.2□□□□□ -2.06
MSH6YDR097C IRS4P36115 615 aaKnown RBP2.2□□□□□ -2.06
MSH6YDR097C ISW1P38144 1129 aa2.2□□□□□ -2.06
MSH6YDR097C NMD3P38861 518 aaKnown RBP2.2□□□□□ -2.06
MSH6YDR097C RRP8P38961 392 aaKnown RBP2.2□□□□□ -2.06
MSH6YDR097C UBP12P39538 1254 aa2.2□□□□□ -2.06
MSH6YDR097C CHZ1P40019 153 aaPredicted RBP2.2□□□□□ -2.06
MSH6YDR097C EMG1Q06287 252 aaKnown RBP2.2□□□□□ -2.06
MSH6YDR097C RTT10Q08924 1013 aa2.2□□□□□ -2.06
MSH6YDR097C VBA3P25594 458 aa2.2□□□□□ -2.06
MSH6YDR097C FUI1P38196 639 aa2.2□□□□□ -2.06
MSH6YDR097C DYS1P38791 387 aa2.2□□□□□ -2.06
MSH6YDR097C NUT1P53114 1132 aa2.2□□□□□ -2.06
MSH6YDR097C ROD1Q02805 837 aa2.2□□□□□ -2.06
MSH6YDR097C ADI1Q03677 179 aa2.2□□□□□ -2.06
MSH6YDR097C UTP14Q04500 899 aaKnown RBP2.2□□□□□ -2.06
MSH6YDR097C GAR1P28007 205 aaKnown RBP2.2□□□□□ -2.06
MSH6YDR097C AIR1P40507 360 aaKnown RBP2.2□□□□□ -2.06
MSH6YDR097C TOP3P13099 656 aa2.19□□□□□ -2.06
MSH6YDR097C NFS1P25374 497 aa2.19□□□□□ -2.06
MSH6YDR097C PER1P25625 357 aa2.19□□□□□ -2.06
MSH6YDR097C ARL1P38116 183 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C ERT1P38140 529 aa2.19□□□□□ -2.06
MSH6YDR097C YBR238CP38330 731 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C MSC7P38694 644 aa2.19□□□□□ -2.06
MSH6YDR097C SIT1P39980 628 aa2.19□□□□□ -2.06
MSH6YDR097C NOP2P40991 618 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C YNR029CP53729 429 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C HED1Q03937 162 aa2.19□□□□□ -2.06
MSH6YDR097C CMR1Q12510 522 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C YLL066CQ99208 1374 aa2.19□□□□□ -2.06
MSH6YDR097C CAT8P39113 1433 aa2.19□□□□□ -2.06
MSH6YDR097C AGP1P25376 633 aa2.19□□□□□ -2.06
MSH6YDR097C KAP122P32767 1081 aa2.19□□□□□ -2.06
MSH6YDR097C YIL165CP40446 119 aa2.19□□□□□ -2.06
MSH6YDR097C ITC1P53125 1264 aa2.19□□□□□ -2.06
MSH6YDR097C SIW14P53965 281 aa2.19□□□□□ -2.06
MSH6YDR097C YLR001CQ07895 862 aa2.19□□□□□ -2.06
MSH6YDR097C FMP25Q08023 583 aa2.19□□□□□ -2.06
MSH6YDR097C MDM12Q92328 271 aa2.19□□□□□ -2.06
MSH6YDR097C RRP5Q05022 1729 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C TRP2P00899 507 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C INH1P01097 85 aa2.19□□□□□ -2.06
MSH6YDR097C RPL8AP17076 256 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C RPL8BP29453 256 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C PRP19P32523 503 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C YRO2P38079 344 aa2.19□□□□□ -2.06
MSH6YDR097C SEA4P38164 1038 aa2.19□□□□□ -2.06
MSH6YDR097C PUS4P48567 403 aaKnown RBP2.19□□□□□ -2.06
MSH6YDR097C PPT1P53043 513 aa2.19□□□□□ -2.06
MSH6YDR097C ERP6P53198 216 aa2.19□□□□□ -2.06
MSH6YDR097C TPO2P53283 614 aa2.19□□□□□ -2.06
MSH6YDR097C PEX6P33760 1030 aa2.18□□□□□ -2.06
MSH6YDR097C TYS1P36421 394 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C RVS167P39743 482 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C JJJ2P46997 583 aa2.18□□□□□ -2.06
MSH6YDR097C DUS1P53759 423 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C MDG1P53885 366 aa2.18□□□□□ -2.06
MSH6YDR097C TGL2P54857 326 aa2.18□□□□□ -2.06
MSH6YDR097C SVL3Q03088 825 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C RKM2Q03942 479 aa2.18□□□□□ -2.06
MSH6YDR097C AOS1Q06624 347 aa2.18□□□□□ -2.06
MSH6YDR097C THI73Q07904 523 aa2.18□□□□□ -2.06
MSH6YDR097C SLX4Q12098 748 aa2.18□□□□□ -2.06
MSH6YDR097C MPE1P35728 441 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C BAP2P38084 609 aa2.18□□□□□ -2.06
MSH6YDR097C IES5P40060 125 aa2.18□□□□□ -2.06
MSH6YDR097C NEO1P40527 1151 aa2.18□□□□□ -2.06
MSH6YDR097C PEX14P53112 341 aa2.18□□□□□ -2.06
MSH6YDR097C BIO5P53744 561 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C KRE33P53914 1056 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C TAF8Q03750 510 aa2.18□□□□□ -2.06
MSH6YDR097C SPP382Q06411 708 aaPredicted RBP2.18□□□□□ -2.06
MSH6YDR097C VMA4P22203 233 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C MSH3P25336 1018 aa2.18□□□□□ -2.06
MSH6YDR097C GFD2P25370 566 aaKnown RBP2.18□□□□□ -2.06
MSH6YDR097C DAL3P32459 195 aa2.18□□□□□ -2.06
MSH6YDR097C AFR1P33304 620 aa2.18□□□□□ -2.06
MSH6YDR097C YKL222CP35995 705 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms