RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W SMC6Q12749 1114 aa10.6□□□□□ -0.71
SED1YDR077W CKA2P19454 339 aa10.59□□□□□ -0.71
SED1YDR077W NDT80P38830 627 aa10.59□□□□□ -0.71
SED1YDR077W THI6P41835 540 aa10.59□□□□□ -0.71
SED1YDR077W CBK1P53894 756 aa10.59□□□□□ -0.71
SED1YDR077W OXR1Q08952 273 aa10.59□□□□□ -0.71
SED1YDR077W AFT2Q08957 416 aa10.59□□□□□ -0.71
SED1YDR077W FOB1O13329 566 aa10.58□□□□□ -0.72
SED1YDR077W ILV1P00927 576 aaKnown RBP10.58□□□□□ -0.72
SED1YDR077W RAD18P10862 487 aa10.58□□□□□ -0.72
SED1YDR077W PER1P25625 357 aa10.58□□□□□ -0.72
SED1YDR077W ORC6P38826 435 aa10.58□□□□□ -0.72
SED1YDR077W ROG3P43602 733 aa10.58□□□□□ -0.72
SED1YDR077W RRT6P53117 311 aaPredicted RBP10.58□□□□□ -0.72
SED1YDR077W ADY4Q05955 493 aa10.58□□□□□ -0.72
SED1YDR077W PET10P36139 283 aa10.57□□□□□ -0.72
SED1YDR077W ISW1P38144 1129 aa10.57□□□□□ -0.72
SED1YDR077W VAB2P40003 282 aa10.57□□□□□ -0.72
SED1YDR077W PEX29Q03370 554 aa10.57□□□□□ -0.72
SED1YDR077W CYC8P14922 966 aa10.56□□□□□ -0.72
SED1YDR077W UGA4P32837 571 aa10.56□□□□□ -0.72
SED1YDR077W PSY4P38193 441 aa10.56□□□□□ -0.72
SED1YDR077W BCD1P38772 366 aa10.56□□□□□ -0.72
SED1YDR077W LIF1P53150 421 aa10.56□□□□□ -0.72
SED1YDR077W TLG2Q08144 397 aa10.56□□□□□ -0.72
SED1YDR077W FBP1P09201 348 aa10.55□□□□□ -0.72
SED1YDR077W YKR018CP36114 725 aa10.55□□□□□ -0.72
SED1YDR077W ALD6P54115 500 aaKnown RBP10.55□□□□□ -0.72
SED1YDR077W SPP382Q06411 708 aaPredicted RBP10.55□□□□□ -0.72
SED1YDR077W TMA16Q08687 178 aa10.55□□□□□ -0.72
SED1YDR077W RKM4Q12504 494 aa10.55□□□□□ -0.72
SED1YDR077W CDC37P06101 506 aaKnown RBP10.54□□□□□ -0.72
SED1YDR077W SAM1P10659 382 aaKnown RBP10.54□□□□□ -0.72
SED1YDR077W MIP1P15801 1254 aa10.54□□□□□ -0.72
SED1YDR077W ERG7P38604 731 aa10.54□□□□□ -0.72
SED1YDR077W PEX21P50091 288 aa10.54□□□□□ -0.72
SED1YDR077W CNM67P53865 581 aaKnown RBP10.54□□□□□ -0.72
SED1YDR077W SPH1Q06160 661 aa10.54□□□□□ -0.72
SED1YDR077W ESC2Q06340 456 aa10.54□□□□□ -0.72
SED1YDR077W YEL076C-AP0CX16 216 aa10.53□□□□□ -0.72
SED1YDR077W YLR464WP0CX17 216 aa10.53□□□□□ -0.72
SED1YDR077W OM45P16547 393 aa10.53□□□□□ -0.72
SED1YDR077W TGL1P34163 548 aa10.53□□□□□ -0.72
SED1YDR077W MCD4P36051 919 aa10.53□□□□□ -0.72
SED1YDR077W SAP190P36123 1033 aa10.53□□□□□ -0.72
SED1YDR077W PNT1P38969 423 aa10.53□□□□□ -0.72
SED1YDR077W YEL076CP39971 216 aa10.53□□□□□ -0.72
SED1YDR077W YIL089WP40500 205 aa10.53□□□□□ -0.72
SED1YDR077W MGA2P40578 1113 aa10.53□□□□□ -0.72
SED1YDR077W YJL007CP47080 104 aa10.53□□□□□ -0.72
SED1YDR077W LSC2P53312 427 aa10.53□□□□□ -0.72
SED1YDR077W VPS75P53853 264 aa10.53□□□□□ -0.72
SED1YDR077W PGA2P53903 129 aa10.53□□□□□ -0.72
SED1YDR077W TMA64Q04600 565 aaKnown RBP10.53□□□□□ -0.72
SED1YDR077W UBX5Q06682 500 aa10.53□□□□□ -0.72
SED1YDR077W GUD1Q07729 489 aa10.53□□□□□ -0.72
SED1YDR077W TYW1Q08960 810 aaKnown RBP10.53□□□□□ -0.72
SED1YDR077W ARP6Q12509 438 aa10.53□□□□□ -0.72
SED1YDR077W PHR1P05066 565 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
SED1YDR077W ISY1P21374 235 aaPredicted RBP10.52□□□□□ -0.73
SED1YDR077W YDJ1P25491 409 aaKnown RBP10.52□□□□□ -0.73
SED1YDR077W MRC1P25588 1096 aa10.52□□□□□ -0.73
SED1YDR077W SPC110P32380 944 aa10.52□□□□□ -0.73
SED1YDR077W PGM1P33401 570 aaKnown RBP10.52□□□□□ -0.73
SED1YDR077W SIP3P38717 1229 aa10.52□□□□□ -0.73
SED1YDR077W YGR237CP50089 785 aa10.52□□□□□ -0.73
SED1YDR077W ORC4P54791 529 aa10.52□□□□□ -0.73
SED1YDR077W FUS2Q05670 677 aa10.52□□□□□ -0.73
SED1YDR077W PSO2P30620 661 aa10.51□□□□□ -0.73
SED1YDR077W RIM101P33400 625 aa10.51□□□□□ -0.73
SED1YDR077W MNN4P36044 1178 aa10.51□□□□□ -0.73
SED1YDR077W SPT8P38915 602 aa10.51□□□□□ -0.73
SED1YDR077W NUP82P40368 713 aa10.51□□□□□ -0.73
SED1YDR077W AIP1P46680 615 aaKnown RBP10.51□□□□□ -0.73
SED1YDR077W NET1P47035 1189 aa10.51□□□□□ -0.73
SED1YDR077W HUL5P53119 910 aa10.51□□□□□ -0.73
SED1YDR077W YAF9P53930 226 aa10.51□□□□□ -0.73
SED1YDR077W EBS1Q03466 884 aaKnown RBP10.51□□□□□ -0.73
SED1YDR077W TY1B-AO13527 1196 aaKnown RBP10.5□□□□□ -0.73
SED1YDR077W PGK1P00560 416 aaKnown RBP10.5□□□□□ -0.73
SED1YDR077W MSH3P25336 1018 aa10.5□□□□□ -0.73
SED1YDR077W RAM2P29703 316 aa10.5□□□□□ -0.73
SED1YDR077W CLB5P30283 435 aa10.5□□□□□ -0.73
SED1YDR077W PPS1P38148 807 aa10.5□□□□□ -0.73
SED1YDR077W PIH1P38768 344 aa10.5□□□□□ -0.73
SED1YDR077W FYV8P46949 817 aaKnown RBP10.5□□□□□ -0.73
SED1YDR077W GUP1P53154 560 aa10.5□□□□□ -0.73
SED1YDR077W SEC5P89102 971 aa10.5□□□□□ -0.73
SED1YDR077W VMA2P16140 517 aaKnown RBP10.49□□□□□ -0.73
SED1YDR077W PFK1P16861 987 aaKnown RBP10.49□□□□□ -0.73
SED1YDR077W PHO13P19881 312 aa10.49□□□□□ -0.73
SED1YDR077W YKL091CP33324 310 aaKnown RBP10.49□□□□□ -0.73
SED1YDR077W MFT1P33441 392 aaKnown RBP10.49□□□□□ -0.73
SED1YDR077W YET1P35723 206 aa10.49□□□□□ -0.73
SED1YDR077W MCR1P36060 302 aaKnown RBP10.49□□□□□ -0.73
SED1YDR077W PCS60P38137 543 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
SED1YDR077W GPB2P39717 880 aa10.49□□□□□ -0.73
SED1YDR077W BRE2P43132 505 aa10.49□□□□□ -0.73
SED1YDR077W CTR9P89105 1077 aa10.49□□□□□ -0.73
SED1YDR077W PHM6Q05637 104 aa10.49□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms