RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	DNM1	P54861	757 aa		4.29	□□□□□ -1.72
RPS13	YDR064W	YLH47	Q06493	454 aa		4.29	□□□□□ -1.72
RPS13	YDR064W	YOL087C	Q99247	1116 aa		4.29	□□□□□ -1.72
RPS13	YDR064W	NUP170	P38181	1502 aa		4.29	□□□□□ -1.72
RPS13	YDR064W	TY1B-H	O13535	1793 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-DR5	P0C2I2	1755 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-DR6	P0C2I3	1755 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-LR2	P0C2I5	1755 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-PR2	P0C2J0	1756 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-JR1	P47098	1755 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-ER1	Q03612	1755 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-GR2	Q12269	1755 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-OL	Q12273	1755 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	TY1B-PL	Q12414	1755 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	SWI5	P08153	709 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	SEN2	P16658	377 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	SEC15	P22224	910 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	MRPL25	P23369	157 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	RAD16	P31244	790 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	RTG2	P32608	588 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	CCL1	P37366	393 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	AHP1	P38013	176 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	ERC1	P38767	581 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	STM1	P39015	273 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	MEF2	P39677	819 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	SPC72	P39723	622 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	SIT1	P39980	628 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	ARB1	P40024	610 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	ATG3	P40344	310 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	ALA1	P40825	983 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	JJJ2	P46997	583 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	NNF1	P47149	201 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	LYS5	P50113	272 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	NOP15	P53927	220 aa	Predicted RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	REX2	P54964	269 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	RSM28	Q03430	361 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	SPO71	Q03868	1245 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	RRN11	Q04712	507 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	FUS2	Q05670	677 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	DBP9	Q06218	594 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	YOL057W	Q08225	711 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	YOR352W	Q08816	343 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	RIO1	Q12196	484 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	SLP1	Q12232	587 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	DBP10	Q12389	995 aa	Known RBP	4.28	□□□□□ -1.72
RPS13	YDR064W	DPH6	Q12429	685 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	YIL002W-A	Q3E7Z5	69 aa		4.28	□□□□□ -1.72
RPS13	YDR064W	RPB2	P08518	1224 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	NAT1	P12945	854 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	PMS1	P14242	873 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	ACE2	P21192	770 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	TSR4	P25040	408 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	ACP1	P32463	125 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	RRN6	P32786	894 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	YME2	P32843	850 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	ESL2	P36168	1195 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	CEM1	P39525	442 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	AIM9	P40053	627 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	YRB1	P41920	201 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	ALD4	P46367	519 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	TIM54	P47045	478 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	YMR265C	Q03508	461 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	VMS1	Q04311	632 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	ATG38	Q05789	226 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	NNT1	Q05874	261 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	SSQ1	Q05931	657 aa	Predicted RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	TSR1	Q07381	788 aa	Known RBP	4.27	□□□□□ -1.73
RPS13	YDR064W	YPR204W	Q08995	1032 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	RTP1	Q12751	981 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	SSN2	P38931	1420 aa		4.27	□□□□□ -1.73
RPS13	YDR064W	IKI3	Q06706	1349 aa	Known RBP	4.26	□□□□□ -1.73
RPS13	YDR064W	MMS22	Q06164	1454 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	RPS31	P05759	152 aa	Known RBP	4.26	□□□□□ -1.73
RPS13	YDR064W	SPS1	P08458	490 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	PET123	P17558	318 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	DIT1	P21623	536 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	MEF1	P25039	761 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	CDC10	P25342	322 aa	Known RBP	4.26	□□□□□ -1.73
RPS13	YDR064W	PEP12	P32854	288 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	MRP8	P35719	219 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	NUP120	P35729	1037 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	UBP13	P38187	747 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	OLA1	P38219	394 aa	Known RBP	4.26	□□□□□ -1.73
RPS13	YDR064W	GGA2	P38817	585 aa	Known RBP	4.26	□□□□□ -1.73
RPS13	YDR064W	CAJ1	P39101	391 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	SAP1	P39955	897 aa	Known RBP	4.26	□□□□□ -1.73
RPS13	YDR064W	RTT105	P40063	208 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	MAM1	P40065	302 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	YIR014W	P40570	242 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
RPS13	YDR064W	MRS2	Q01926	470 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	NSE3	Q05541	303 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	SMD2	Q06217	110 aa	Known RBP	4.26	□□□□□ -1.73
RPS13	YDR064W	YPQ2	Q06328	317 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	TY2B-B	Q12491	1770 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms