RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	ARR1	Q06596	294 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	PDR1	P12383	1068 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	TYR1	P20049	452 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	CKI1	P20485	582 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	PEP3	P27801	918 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	TDA11	P38854	504 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	GCN20	P43535	752 aa	Known RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	DAS1	P47005	663 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	SHE10	P53075	577 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	YNL247W	P53852	767 aa	Known RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	NEW1	Q08972	1196 aa	Known RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	RRP6	Q12149	733 aa	Known RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	ADE3	P07245	946 aa	Known RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	YMR085W	P0CF18	432 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	UGA3	P26370	528 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	COQ8	P27697	501 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	SRB4	P32569	687 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	SLA1	P32790	1244 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	AMN1	P38285	549 aa	Predicted RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	PPX1	P38698	397 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	INA22	P40576	216 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	VTC2	P43585	828 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	IST1	P53843	298 aa	Predicted RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	JJJ1	P53863	590 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	TIM11	P81449	96 aa	Predicted RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	VPS16	Q03308	798 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	USA1	Q03714	838 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	VTI1	Q04338	217 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	NSE3	Q05541	303 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	FKS3	Q04952	1785 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	PRT1	P06103	763 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	TOM70	P07213	617 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	TAL1	P15019	335 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	UBP1	P25037	809 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	YCR051W	P25631	222 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	RME1	P32338	300 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	HXT1	P32465	570 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	SAC6	P32599	642 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	ATO2	P32907	282 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	NUP133	P36161	1157 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	MIP6	P38760	659 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	SSF1	P38789	453 aa	Predicted RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	RTS1	P38903	757 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	ENP2	P48234	707 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	LSC2	P53312	427 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	SOV1	Q04748	898 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	ALR1	Q08269	859 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	YOR296W	Q08748	1289 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	NAT1	P12945	854 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	MVD1	P32377	396 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	CDC11	P32458	415 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	SPP381	P38282	291 aa	Predicted RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	CCT2	P39076	527 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	KAP123	P40069	1113 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	SCS2	P40075	244 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	PEA2	P40091	420 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	SCY1	P53009	804 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	TEL2	P53038	688 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	RPT6	Q01939	405 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	UME1	Q03010	460 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	TLG1	Q03322	224 aa		4.35	□□□□□ -1.71
VMA1	YDL185W	EBS1	Q03466	884 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	UTP5	Q04177	643 aa	Known RBP	4.35	□□□□□ -1.71
VMA1	YDL185W	BAS1	P22035	811 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	STE13	P33894	931 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	VFA1	P40080	203 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	SUM1	P46676	1062 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	FYV8	P46949	817 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	YJR008W	P47085	338 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	RBL2	P48606	106 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	ATP25	Q03153	612 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	URH1	Q04179	340 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	GGA1	Q06336	557 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	MPC54	Q08550	464 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	SLK19	Q08581	821 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	GPN2	Q08726	347 aa	Predicted RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	TAF10	Q12030	206 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	PPR1	P07272	904 aa	Predicted RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	CDC6	P09119	513 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	MCM1	P11746	286 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	VPS1	P21576	704 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	PDC6	P26263	563 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	IMP2'	P32351	346 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	RIB7	P33312	244 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	STB1	P42845	420 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	UBP6	P43593	499 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	AIP1	P46680	615 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	YNL144C	P53907	740 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	YML119W	Q03208	357 aa		4.34	□□□□□ -1.71
VMA1	YDL185W	TMA64	Q04600	565 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	CHS5	Q12114	671 aa	Known RBP	4.34	□□□□□ -1.71
VMA1	YDL185W	ENO2	P00925	437 aa	Known RBP	4.34	□□□□□ -1.72
VMA1	YDL185W	CLN1	P20437	546 aa		4.34	□□□□□ -1.72
VMA1	YDL185W	CBP3	P21560	335 aa		4.34	□□□□□ -1.72
VMA1	YDL185W	MLS1	P30952	554 aa		4.34	□□□□□ -1.72
VMA1	YDL185W	RPS0A	P32905	252 aa	Known RBP	4.34	□□□□□ -1.72
VMA1	YDL185W	CSE1	P33307	960 aa		4.34	□□□□□ -1.72
VMA1	YDL185W	UGA2	P38067	497 aa		4.34	□□□□□ -1.72
VMA1	YDL185W	CST6	P40535	587 aa		4.34	□□□□□ -1.72
VMA1	YDL185W	MAD1	P40957	749 aa		4.34	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms