RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W MAL31P38156 614 aa2.4□□□□□ -2.03
MSH5YDL154W NMD2P38798 1089 aaKnown RBP2.4□□□□□ -2.03
MSH5YDL154W SPF1P39986 1215 aaKnown RBP2.4□□□□□ -2.03
MSH5YDL154W SPO74P45819 413 aa2.4□□□□□ -2.03
MSH5YDL154W HUL5P53119 910 aa2.4□□□□□ -2.03
MSH5YDL154W TPO2P53283 614 aa2.4□□□□□ -2.03
MSH5YDL154W RNH70P53331 553 aa2.4□□□□□ -2.03
MSH5YDL154W ELA1P53861 379 aaPredicted RBP2.4□□□□□ -2.03
MSH5YDL154W EEB1Q02891 456 aa2.4□□□□□ -2.03
MSH5YDL154W HPF1Q05164 967 aa2.4□□□□□ -2.03
MSH5YDL154W REC8Q12188 680 aa2.4□□□□□ -2.03
MSH5YDL154W PTC5Q12511 572 aa2.4□□□□□ -2.03
MSH5YDL154W GAL11P19659 1081 aa2.4□□□□□ -2.03
MSH5YDL154W ARE1P25628 610 aa2.4□□□□□ -2.03
MSH5YDL154W SBA1P28707 216 aaKnown RBP2.4□□□□□ -2.03
MSH5YDL154W SCT1P32784 759 aa2.4□□□□□ -2.03
MSH5YDL154W DUT1P33317 147 aa2.4□□□□□ -2.03
MSH5YDL154W RER2P35196 286 aa2.4□□□□□ -2.03
MSH5YDL154W RRM3P38766 723 aa2.4□□□□□ -2.03
MSH5YDL154W JJJ3P47138 172 aa2.4□□□□□ -2.03
MSH5YDL154W HNT2P49775 206 aa2.4□□□□□ -2.03
MSH5YDL154W KIP3P53086 805 aaKnown RBP2.4□□□□□ -2.03
MSH5YDL154W DSE4P53753 1117 aa2.4□□□□□ -2.03
MSH5YDL154W DOT1Q04089 582 aaKnown RBP2.4□□□□□ -2.03
MSH5YDL154W SPP382Q06411 708 aaPredicted RBP2.4□□□□□ -2.03
MSH5YDL154W YOR223WQ12015 292 aa2.4□□□□□ -2.03
MSH5YDL154W PUF4P25339 888 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
MSH5YDL154W AGP1P25376 633 aa2.39□□□□□ -2.03
MSH5YDL154W RRP14P36080 434 aaKnown RBP2.39□□□□□ -2.03
MSH5YDL154W YGR053CP53234 283 aa2.39□□□□□ -2.03
MSH5YDL154W YGR125WP53273 1036 aa2.39□□□□□ -2.03
MSH5YDL154W RAT1Q02792 1006 aaKnown RBP2.39□□□□□ -2.03
MSH5YDL154W HVG1P0CE11 249 aa2.39□□□□□ -2.03
MSH5YDL154W MKK2P32491 506 aa2.39□□□□□ -2.03
MSH5YDL154W MYO4P32492 1471 aa2.39□□□□□ -2.03
MSH5YDL154W YKL069WP36088 180 aa2.39□□□□□ -2.03
MSH5YDL154W IOC3P43596 787 aa2.39□□□□□ -2.03
MSH5YDL154W CNN1P43618 361 aa2.39□□□□□ -2.03
MSH5YDL154W YGL176CP46945 554 aa2.39□□□□□ -2.03
MSH5YDL154W RKM2Q03942 479 aa2.39□□□□□ -2.03
MSH5YDL154W AOS1Q06624 347 aa2.39□□□□□ -2.03
MSH5YDL154W RKM4Q12504 494 aa2.39□□□□□ -2.03
MSH5YDL154W ERS1P17261 260 aa2.38□□□□□ -2.03
MSH5YDL154W DBP5P20449 482 aaKnown RBP2.38□□□□□ -2.03
MSH5YDL154W ALG3P38179 458 aa2.38□□□□□ -2.03
MSH5YDL154W YBR184WP38299 523 aa2.38□□□□□ -2.03
MSH5YDL154W POL5P39985 1022 aaKnown RBP2.38□□□□□ -2.03
MSH5YDL154W HUL4P40985 892 aa2.38□□□□□ -2.03
MSH5YDL154W VPS53P47061 822 aa2.38□□□□□ -2.03
MSH5YDL154W YGR045CP53229 120 aa2.38□□□□□ -2.03
MSH5YDL154W TIF35Q04067 274 aaKnown RBP2.38□□□□□ -2.03
MSH5YDL154W HRK1Q08732 759 aaKnown RBP2.38□□□□□ -2.03
MSH5YDL154W TY4B-PA0A0B7P3V8 1104 aa2.38□□□□□ -2.03
MSH5YDL154W PRP9P19736 530 aaKnown RBP2.38□□□□□ -2.03
MSH5YDL154W HSP60P19882 572 aaKnown RBP2.38□□□□□ -2.03
MSH5YDL154W MLS1P30952 554 aa2.38□□□□□ -2.03
MSH5YDL154W PIN4P34217 668 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
MSH5YDL154W VBA5P36172 582 aa2.38□□□□□ -2.03
MSH5YDL154W RDH54P38086 958 aa2.38□□□□□ -2.03
MSH5YDL154W PBP2P38151 413 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
MSH5YDL154W PBY1P38254 753 aa2.38□□□□□ -2.03
MSH5YDL154W ERP6P53198 216 aa2.38□□□□□ -2.03
MSH5YDL154W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03 RIP-Chip
MSH5YDL154W EAF1Q06337 982 aa2.38□□□□□ -2.03
MSH5YDL154W BDF2Q07442 638 aa2.38□□□□□ -2.03
MSH5YDL154W YDL124WQ07551 312 aaKnown RBP2.38□□□□□ -2.03
MSH5YDL154W TY4A-HQ6Q5P6 413 aa2.38□□□□□ -2.03
MSH5YDL154W BNR1P40450 1375 aa2.37□□□□□ -2.03
MSH5YDL154W RSC6P25632 483 aa2.37□□□□□ -2.03
MSH5YDL154W PPH3P32345 308 aa2.37□□□□□ -2.03
MSH5YDL154W RGD1P38339 666 aa2.37□□□□□ -2.03
MSH5YDL154W GGA2P38817 585 aaKnown RBP2.37□□□□□ -2.03
MSH5YDL154W ALR2P43553 858 aa2.37□□□□□ -2.03
MSH5YDL154W GNP1P48813 663 aa2.37□□□□□ -2.03
MSH5YDL154W YLR257WQ06146 321 aaKnown RBP2.37□□□□□ -2.03
MSH5YDL154W ESC2Q06340 456 aa2.37□□□□□ -2.03
MSH5YDL154W THI72Q08579 599 aa2.37□□□□□ -2.03
MSH5YDL154W SPO21Q12411 609 aa2.37□□□□□ -2.03
MSH5YDL154W SPP41P38904 1435 aa2.37□□□□□ -2.03
MSH5YDL154W CIT1P00890 479 aa2.37□□□□□ -2.03
MSH5YDL154W MET6P05694 767 aaKnown RBP2.37□□□□□ -2.03
MSH5YDL154W RET1P22276 1149 aaKnown RBP2.37□□□□□ -2.03
MSH5YDL154W NUP82P40368 713 aa2.37□□□□□ -2.03
MSH5YDL154W IRR1P40541 1150 aa2.37□□□□□ -2.03
MSH5YDL154W SHE9Q04172 456 aa2.37□□□□□ -2.03
MSH5YDL154W YDR306CQ06640 478 aa2.37□□□□□ -2.03
MSH5YDL154W YDL176WQ12027 708 aa2.37□□□□□ -2.03
MSH5YDL154W NUP159P40477 1460 aa2.37□□□□□ -2.03
MSH5YDL154W SNT2P53127 1403 aa2.37□□□□□ -2.03
MSH5YDL154W CIT2P08679 460 aa2.36□□□□□ -2.03
MSH5YDL154W HEM13P11353 328 aaKnown RBP2.36□□□□□ -2.03
MSH5YDL154W PHO8P11491 566 aa2.36□□□□□ -2.03
MSH5YDL154W AAR2P32357 355 aaPredicted RBP2.36□□□□□ -2.03
MSH5YDL154W COQ2P32378 372 aa2.36□□□□□ -2.03
MSH5YDL154W CDC11P32458 415 aa2.36□□□□□ -2.03
MSH5YDL154W NNK1P36003 928 aa2.36□□□□□ -2.03
MSH5YDL154W GPT2P36148 743 aa2.36□□□□□ -2.03
MSH5YDL154W CCC2P38995 1004 aa2.36□□□□□ -2.03
MSH5YDL154W MBP1P39678 833 aa2.36□□□□□ -2.03
MSH5YDL154W HXT13P39924 564 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms