RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W HEL1P36113 551 aa7.67□□□□□ -1.18
NUP84YDL116W PET10P36139 283 aa7.67□□□□□ -1.18
NUP84YDL116W YJR142WP47173 342 aa7.67□□□□□ -1.18
NUP84YDL116W SPO11P23179 398 aa7.66□□□□□ -1.18
NUP84YDL116W BMH1P29311 267 aaKnown RBP7.66□□□□□ -1.18
NUP84YDL116W MDL2P33311 773 aa7.66□□□□□ -1.18
NUP84YDL116W YKL091CP33324 310 aaKnown RBP7.66□□□□□ -1.18
NUP84YDL116W PTK1P36002 662 aaPredicted RBP7.66□□□□□ -1.18
NUP84YDL116W VFA1P40080 203 aa7.66□□□□□ -1.18
NUP84YDL116W NGL3Q03210 505 aa7.66□□□□□ -1.18
NUP84YDL116W YOR296WQ08748 1289 aa7.66□□□□□ -1.18
NUP84YDL116W BIO2P32451 375 aa7.66□□□□□ -1.18
NUP84YDL116W YKR075CP36155 307 aa7.66□□□□□ -1.18
NUP84YDL116W STS1P38637 319 aa7.66□□□□□ -1.18
NUP84YDL116W RMP1Q12530 201 aa7.66□□□□□ -1.18
NUP84YDL116W TUP1P16649 713 aa7.65□□□□□ -1.18
NUP84YDL116W RRP1P35178 278 aaPredicted RBP7.65□□□□□ -1.18
NUP84YDL116W SET5P38890 526 aaKnown RBP7.65□□□□□ -1.18
NUP84YDL116W NUG1P40010 520 aaKnown RBP7.65□□□□□ -1.18
NUP84YDL116W CCM1P48237 864 aaPredicted RBP7.65□□□□□ -1.18
NUP84YDL116W MAL13P53338 473 aa7.65□□□□□ -1.18
NUP84YDL116W RPT4P53549 437 aaKnown RBP7.65□□□□□ -1.18
NUP84YDL116W NSG2P53898 299 aa7.65□□□□□ -1.18
NUP84YDL116W SIL1Q08199 421 aa7.65□□□□□ -1.18
NUP84YDL116W ARG1P22768 420 aa7.64□□□□□ -1.19
NUP84YDL116W RTG2P32608 588 aaKnown RBP7.64□□□□□ -1.19
NUP84YDL116W EFM2P38347 419 aa7.64□□□□□ -1.19
NUP84YDL116W VHR2P40041 505 aa7.64□□□□□ -1.19
NUP84YDL116W UBA2P52488 636 aa7.64□□□□□ -1.19
NUP84YDL116W SDA1P53313 767 aaKnown RBP7.64□□□□□ -1.19
NUP84YDL116W DOS2P54858 310 aa7.64□□□□□ -1.19
NUP84YDL116W UTP5Q04177 643 aaKnown RBP7.64□□□□□ -1.19
NUP84YDL116W TOS4Q06266 489 aa7.64□□□□□ -1.19
NUP84YDL116W NYV1Q12255 253 aa7.64□□□□□ -1.19
NUP84YDL116W NUC1P08466 329 aa7.64□□□□□ -1.19
NUP84YDL116W YAP5P40574 245 aa7.64□□□□□ -1.19
NUP84YDL116W YDR341CQ05506 607 aaKnown RBP7.64□□□□□ -1.19
NUP84YDL116W GRE2Q12068 342 aaKnown RBP7.64□□□□□ -1.19
NUP84YDL116W HAT1Q12341 374 aa7.64□□□□□ -1.19
NUP84YDL116W CIT1P00890 479 aa7.63□□□□□ -1.19
NUP84YDL116W PRP16P15938 1071 aaPredicted RBP7.63□□□□□ -1.19
NUP84YDL116W MAK31P23059 88 aa7.63□□□□□ -1.19
NUP84YDL116W GRX1P25373 110 aaKnown RBP7.63□□□□□ -1.19
NUP84YDL116W VID27P40157 782 aa7.63□□□□□ -1.19
NUP84YDL116W SAC3P46674 1301 aa7.63□□□□□ -1.19
NUP84YDL116W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19 RIP-Chip
NUP84YDL116W HIR1P32479 840 aa7.63□□□□□ -1.19
NUP84YDL116W SRB4P32569 687 aa7.63□□□□□ -1.19
NUP84YDL116W YEL043WP32618 956 aa7.63□□□□□ -1.19
NUP84YDL116W PTC3P34221 468 aaKnown RBP7.63□□□□□ -1.19
NUP84YDL116W MYO3P36006 1272 aa7.63□□□□□ -1.19
NUP84YDL116W BYE1P36106 594 aa7.63□□□□□ -1.19
NUP84YDL116W MAL31P38156 614 aa7.63□□□□□ -1.19
NUP84YDL116W YBL036CP38197 257 aa7.63□□□□□ -1.19
NUP84YDL116W CCT2P39076 527 aaKnown RBP7.63□□□□□ -1.19
NUP84YDL116W BUD16P39988 312 aa7.63□□□□□ -1.19
NUP84YDL116W YMR1P47147 688 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
NUP84YDL116W ZPR1P53303 486 aaKnown RBP7.63□□□□□ -1.19
NUP84YDL116W RPT6Q01939 405 aaKnown RBP7.63□□□□□ -1.19
NUP84YDL116W IRC4Q03036 179 aa7.63□□□□□ -1.19
NUP84YDL116W PRP3Q03338 469 aaPredicted RBP7.63□□□□□ -1.19
NUP84YDL116W CSR1Q06705 408 aaKnown RBP7.63□□□□□ -1.19
NUP84YDL116W GPI10P30777 616 aa7.62□□□□□ -1.19
NUP84YDL116W JNM1P36224 373 aa7.62□□□□□ -1.19
NUP84YDL116W ISW1P38144 1129 aa7.62□□□□□ -1.19
NUP84YDL116W MMM1P41800 426 aa7.62□□□□□ -1.19
NUP84YDL116W TOS3P43637 560 aa7.62□□□□□ -1.19
NUP84YDL116W TRS85P46944 698 aa7.62□□□□□ -1.19
NUP84YDL116W UTP14Q04500 899 aaKnown RBP7.62□□□□□ -1.19
NUP84YDL116W YML083CQ04526 418 aa7.62□□□□□ -1.19
NUP84YDL116W YDR278CQ05612 105 aa7.62□□□□□ -1.19
NUP84YDL116W TOP1P04786 769 aa7.61□□□□□ -1.19
NUP84YDL116W RNR3P21672 869 aaKnown RBP7.61□□□□□ -1.19
NUP84YDL116W BOI1P38041 980 aaKnown RBP7.61□□□□□ -1.19
NUP84YDL116W ORC6P38826 435 aa7.61□□□□□ -1.19
NUP84YDL116W YNL320WP42840 284 aa7.61□□□□□ -1.19
NUP84YDL116W YFL034WP43564 1073 aa7.61□□□□□ -1.19
NUP84YDL116W GDE1Q02979 1223 aa7.61□□□□□ -1.19
NUP84YDL116W RIB2Q12362 591 aaKnown RBP7.61□□□□□ -1.19
NUP84YDL116W STT3P39007 718 aaKnown RBP7.61□□□□□ -1.19
NUP84YDL116W GSM1P42950 618 aa7.61□□□□□ -1.19
NUP84YDL116W CIT3P43635 486 aa7.61□□□□□ -1.19
NUP84YDL116W PNP1Q05788 311 aa7.61□□□□□ -1.19
NUP84YDL116W NUR1Q12066 484 aa7.61□□□□□ -1.19
NUP84YDL116W CDC8P00572 216 aa7.6□□□□□ -1.19
NUP84YDL116W PIF1P07271 859 aa7.6□□□□□ -1.19
NUP84YDL116W OM45P16547 393 aa7.6□□□□□ -1.19
NUP84YDL116W SMC1P32908 1225 aa7.6□□□□□ -1.19
NUP84YDL116W LOS1P33418 1100 aaPredicted RBP7.6□□□□□ -1.19
NUP84YDL116W LAS1P36146 502 aaPredicted RBP7.6□□□□□ -1.19
NUP84YDL116W PPS1P38148 807 aa7.6□□□□□ -1.19
NUP84YDL116W YGR273CP53329 174 aa7.6□□□□□ -1.19
NUP84YDL116W TYW1Q08960 810 aaKnown RBP7.6□□□□□ -1.19
NUP84YDL116W PMD1P32634 1753 aa7.6□□□□□ -1.19
NUP84YDL116W ALG1P16661 449 aa7.6□□□□□ -1.19
NUP84YDL116W KAR3P17119 729 aa7.6□□□□□ -1.19
NUP84YDL116W SEC8P32855 1065 aa7.6□□□□□ -1.19
NUP84YDL116W YBR062CP38239 180 aa7.6□□□□□ -1.19
NUP84YDL116W BCD1P38772 366 aa7.6□□□□□ -1.19
NUP84YDL116W MRX1P40050 688 aa7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms