RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C YGL138CP53122 345 aa2.34□□□□□ -2.03
BRE1YDL074C RET3P53600 189 aa2.34□□□□□ -2.03
BRE1YDL074C BNI5P53890 448 aaKnown RBP2.34□□□□□ -2.03
BRE1YDL074C ALF1P53904 254 aa2.34□□□□□ -2.03
BRE1YDL074C MMR1Q06324 491 aa2.34□□□□□ -2.03
BRE1YDL074C DCS2Q12123 353 aa2.34□□□□□ -2.03
BRE1YDL074C SFI1Q12369 946 aa2.34□□□□□ -2.03
BRE1YDL074C FOB1O13329 566 aa2.33□□□□□ -2.04
BRE1YDL074C MET6P05694 767 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C CDC37P06101 506 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C MSM1P22438 575 aa2.33□□□□□ -2.04
BRE1YDL074C PRE8P23639 250 aa2.33□□□□□ -2.04
BRE1YDL074C MSH3P25336 1018 aa2.33□□□□□ -2.04
BRE1YDL074C HIR1P32479 840 aa2.33□□□□□ -2.04
BRE1YDL074C NFU1P32860 256 aa2.33□□□□□ -2.04
BRE1YDL074C MFT1P33441 392 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C ROG3P43602 733 aa2.33□□□□□ -2.04
BRE1YDL074C COS5P47187 383 aa2.33□□□□□ -2.04
BRE1YDL074C CTH1P47976 325 aa2.33□□□□□ -2.04
BRE1YDL074C SDA1P53313 767 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C MAL13P53338 473 aa2.33□□□□□ -2.04
BRE1YDL074C FOL1P53848 824 aa2.33□□□□□ -2.04
BRE1YDL074C SEC5P89102 971 aa2.33□□□□□ -2.04
BRE1YDL074C SEN54Q02825 467 aaPredicted RBP2.33□□□□□ -2.04
BRE1YDL074C WAR1Q03631 944 aa2.33□□□□□ -2.04
BRE1YDL074C UTP5Q04177 643 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C EIS1Q05050 843 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C VIP1Q06685 1146 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C SLK19Q08581 821 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C DSE3Q08729 430 aa2.33□□□□□ -2.04
BRE1YDL074C YOR111WQ99210 232 aa2.33□□□□□ -2.04
BRE1YDL074C CDC6P09119 513 aa2.33□□□□□ -2.04
BRE1YDL074C MAK16P10962 306 aaPredicted RBP2.33□□□□□ -2.04
BRE1YDL074C OM45P16547 393 aa2.33□□□□□ -2.04
BRE1YDL074C RPL8AP17076 256 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C PHO13P19881 312 aa2.33□□□□□ -2.04
BRE1YDL074C SRM1P21827 482 aa2.33□□□□□ -2.04
BRE1YDL074C RET1P22276 1149 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C CDC15P27636 974 aa2.33□□□□□ -2.04
BRE1YDL074C SPT5P27692 1063 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C URA1P28272 314 aaPredicted RBP2.33□□□□□ -2.04
BRE1YDL074C SMY1P32364 656 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C SRB4P32569 687 aa2.33□□□□□ -2.04
BRE1YDL074C RPT3P33298 428 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C CST26P38226 397 aa2.33□□□□□ -2.04
BRE1YDL074C CTM1P38818 585 aa2.33□□□□□ -2.04
BRE1YDL074C SHC1P39000 512 aa2.33□□□□□ -2.04
BRE1YDL074C YER156CP40093 338 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C NDC80P40460 691 aa2.33□□□□□ -2.04
BRE1YDL074C SOL4P53315 255 aa2.33□□□□□ -2.04
BRE1YDL074C MDM1Q01846 1127 aa2.33□□□□□ -2.04
BRE1YDL074C RNT1Q02555 471 aa2.33□□□□□ -2.04
BRE1YDL074C VPS30Q02948 557 aa2.33□□□□□ -2.04
BRE1YDL074C HED1Q03937 162 aa2.33□□□□□ -2.04
BRE1YDL074C VMS1Q04311 632 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C VPS38Q05919 439 aa2.33□□□□□ -2.04
BRE1YDL074C COG4Q06096 861 aa2.33□□□□□ -2.04
BRE1YDL074C TLG2Q08144 397 aa2.33□□□□□ -2.04
BRE1YDL074C GIN4Q12263 1142 aa2.33□□□□□ -2.04
BRE1YDL074C SMC6Q12749 1114 aa2.33□□□□□ -2.04
BRE1YDL074C NOP14Q99207 810 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C FKS1P38631 1876 aaKnown RBP2.33□□□□□ -2.04
BRE1YDL074C GSC2P40989 1895 aa2.33□□□□□ -2.04
BRE1YDL074C CHO2P05374 869 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C NUC1P08466 329 aa2.32□□□□□ -2.04
BRE1YDL074C GAL2P13181 574 aa2.32□□□□□ -2.04
BRE1YDL074C DPB3P27344 201 aa2.32□□□□□ -2.04
BRE1YDL074C SRP40P32583 406 aaPredicted RBP2.32□□□□□ -2.04
BRE1YDL074C LTV1P34078 463 aa2.32□□□□□ -2.04
BRE1YDL074C BYE1P36106 594 aa2.32□□□□□ -2.04
BRE1YDL074C YHL050CP38721 697 aa2.32□□□□□ -2.04
BRE1YDL074C SPT8P38915 602 aa2.32□□□□□ -2.04
BRE1YDL074C STT3P39007 718 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C CSM2P40465 213 aa2.32□□□□□ -2.04
BRE1YDL074C THI6P41835 540 aa2.32□□□□□ -2.04
BRE1YDL074C ISM1P48526 1002 aa2.32□□□□□ -2.04
BRE1YDL074C APT1P49435 187 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C HUL5P53119 910 aa2.32□□□□□ -2.04
BRE1YDL074C DSE4P53753 1117 aa2.32□□□□□ -2.04
BRE1YDL074C CNM67P53865 581 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C YAF9P53930 226 aa2.32□□□□□ -2.04
BRE1YDL074C MFM1Q02783 413 aa2.32□□□□□ -2.04
BRE1YDL074C YLR287CQ05881 355 aa2.32□□□□□ -2.04
BRE1YDL074C SMD2Q06217 110 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C SKG3Q06315 1026 aa2.32□□□□□ -2.04
BRE1YDL074C SPP382Q06411 708 aaPredicted RBP2.32□□□□□ -2.04
BRE1YDL074C YLH47Q06493 454 aa2.32□□□□□ -2.04
BRE1YDL074C TSR1Q07381 788 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C TY1B-AO13527 1196 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C TUF1P02992 437 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C PDC1P06169 563 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C SWI6P09959 803 aa2.32□□□□□ -2.04
BRE1YDL074C KIN1P13185 1064 aa2.32□□□□□ -2.04
BRE1YDL074C SEC23P15303 768 aaKnown RBP2.32□□□□□ -2.04
BRE1YDL074C SPO11P23179 398 aa2.32□□□□□ -2.04
BRE1YDL074C GSY1P23337 708 aa2.32□□□□□ -2.04
BRE1YDL074C STE11P23561 717 aa2.32□□□□□ -2.04
BRE1YDL074C RPC53P25441 422 aa2.32□□□□□ -2.04
BRE1YDL074C APL1P27351 700 aa2.32□□□□□ -2.04
BRE1YDL074C VPS35P34110 944 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms