RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W SIC1P38634 284 aa6.19□□□□□ -1.42
RPT2YDL007W NTA1P40354 457 aa6.19□□□□□ -1.42
RPT2YDL007W HYR1P40581 163 aaKnown RBP6.19□□□□□ -1.42
RPT2YDL007W SSL2Q00578 843 aa6.19□□□□□ -1.42
RPT2YDL007W TIM50Q02776 476 aa6.19□□□□□ -1.42
RPT2YDL007W YLR278CQ05854 1341 aa6.19□□□□□ -1.42
RPT2YDL007W LYS2P07702 1392 aa6.18□□□□□ -1.42
RPT2YDL007W GPM1P00950 247 aaKnown RBP6.18□□□□□ -1.42
RPT2YDL007W BIK1P11709 440 aa6.18□□□□□ -1.42
RPT2YDL007W MFT1P33441 392 aaKnown RBP6.18□□□□□ -1.42
RPT2YDL007W MNR2P35724 969 aa6.18□□□□□ -1.42
RPT2YDL007W MRPL10P36520 322 aa6.18□□□□□ -1.42
RPT2YDL007W RAD55P38953 406 aa6.18□□□□□ -1.42
RPT2YDL007W HXT17P53631 564 aa6.18□□□□□ -1.42
RPT2YDL007W RNT1Q02555 471 aa6.18□□□□□ -1.42
RPT2YDL007W PDC5P16467 563 aaKnown RBP6.17□□□□□ -1.42
RPT2YDL007W MGE1P38523 228 aa6.17□□□□□ -1.42
RPT2YDL007W RFC1P38630 861 aaKnown RBP6.17□□□□□ -1.42
RPT2YDL007W MSC7P38694 644 aa6.17□□□□□ -1.42
RPT2YDL007W NMD2P38798 1089 aaKnown RBP6.17□□□□□ -1.42
RPT2YDL007W AIM46P38885 310 aa6.17□□□□□ -1.42
RPT2YDL007W PAP2P53632 584 aaKnown RBP6.17□□□□□ -1.42
RPT2YDL007W MRS2Q01926 470 aa6.17□□□□□ -1.42
RPT2YDL007W YOL087CQ99247 1116 aa6.17□□□□□ -1.42
RPT2YDL007W COBP00163 385 aa6.16□□□□□ -1.42
RPT2YDL007W RNR2P09938 399 aaKnown RBP6.16□□□□□ -1.42
RPT2YDL007W DEF1P35732 738 aaKnown RBP6.16□□□□□ -1.42
RPT2YDL007W IRS4P36115 615 aaKnown RBP6.16□□□□□ -1.42
RPT2YDL007W BSD2P38356 321 aa6.16□□□□□ -1.42
RPT2YDL007W YGL140CP53120 1219 aa6.16□□□□□ -1.42
RPT2YDL007W TRS120Q04183 1289 aa6.16□□□□□ -1.42
RPT2YDL007W SML1Q04964 104 aa6.16□□□□□ -1.42
RPT2YDL007W HIM1Q06674 414 aa6.16□□□□□ -1.42
RPT2YDL007W GPI13Q07830 1017 aa6.16□□□□□ -1.42
RPT2YDL007W RPB10P22139 70 aa6.15□□□□□ -1.43
RPT2YDL007W MSH3P25336 1018 aa6.15□□□□□ -1.43
RPT2YDL007W NAB2P32505 525 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
RPT2YDL007W YIL165CP40446 119 aa6.15□□□□□ -1.43
RPT2YDL007W NCS6P53088 359 aa6.15□□□□□ -1.43
RPT2YDL007W YMR102CQ03177 834 aa6.15□□□□□ -1.43
RPT2YDL007W AUS1Q08409 1394 aa6.15□□□□□ -1.43
RPT2YDL007W RPS9BP05755 195 aaKnown RBP6.14□□□□□ -1.43
RPT2YDL007W YGL082WP53155 381 aa6.14□□□□□ -1.43
RPT2YDL007W SPO1P53541 631 aa6.14□□□□□ -1.43
RPT2YDL007W PRP3Q03338 469 aaPredicted RBP6.14□□□□□ -1.43
RPT2YDL007W PEX19Q07418 342 aa6.14□□□□□ -1.43
RPT2YDL007W PHM7Q12252 991 aa6.14□□□□□ -1.43
RPT2YDL007W NUM1Q00402 2748 aa6.14□□□□□ -1.43
RPT2YDL007W FKS3Q04952 1785 aa6.13□□□□□ -1.43
RPT2YDL007W THS1P04801 734 aaKnown RBP6.13□□□□□ -1.43
RPT2YDL007W SES1P07284 462 aaKnown RBP6.13□□□□□ -1.43
RPT2YDL007W IDI1P15496 288 aa6.13□□□□□ -1.43
RPT2YDL007W MSH1P25846 959 aa6.13□□□□□ -1.43
RPT2YDL007W YKL133CP36066 463 aa6.13□□□□□ -1.43
RPT2YDL007W YKR075CP36155 307 aa6.13□□□□□ -1.43
RPT2YDL007W YNG2P38806 282 aaKnown RBP6.13□□□□□ -1.43
RPT2YDL007W VPS41P38959 992 aa6.13□□□□□ -1.43
RPT2YDL007W PSY2P40164 858 aa6.13□□□□□ -1.43
RPT2YDL007W YNR040WP53736 256 aa6.13□□□□□ -1.43
RPT2YDL007W RPN7Q06103 429 aaKnown RBP6.13□□□□□ -1.43
RPT2YDL007W JIP5Q06214 492 aaPredicted RBP6.13□□□□□ -1.43
RPT2YDL007W BUG1Q12191 341 aa6.13□□□□□ -1.43
RPT2YDL007W SLP1Q12232 587 aa6.13□□□□□ -1.43
RPT2YDL007W TAF13P11747 167 aa6.12□□□□□ -1.43
RPT2YDL007W BYE1P36106 594 aa6.12□□□□□ -1.43
RPT2YDL007W NPR3P38742 1146 aa6.12□□□□□ -1.43
RPT2YDL007W RTT107P38850 1070 aa6.12□□□□□ -1.43
RPT2YDL007W PRK1P40494 810 aa6.12□□□□□ -1.43
RPT2YDL007W MSH4P40965 878 aaPredicted RBP6.12□□□□□ -1.43
RPT2YDL007W RGD2P43556 714 aa6.12□□□□□ -1.43
RPT2YDL007W YJR107WP47145 328 aa6.12□□□□□ -1.43
RPT2YDL007W PRP31P49704 494 aaPredicted RBP6.12□□□□□ -1.43
RPT2YDL007W YNR014WP53719 212 aa6.12□□□□□ -1.43
RPT2YDL007W CSI1Q04368 295 aa6.12□□□□□ -1.43
RPT2YDL007W TAP42Q04372 366 aa6.12□□□□□ -1.43
RPT2YDL007W TLG2Q08144 397 aa6.12□□□□□ -1.43
RPT2YDL007W RET1P22276 1149 aaKnown RBP6.11□□□□□ -1.43
RPT2YDL007W MRC1P25588 1096 aa6.11□□□□□ -1.43
RPT2YDL007W ECM2P38241 364 aaKnown RBP6.11□□□□□ -1.43
RPT2YDL007W GDT1P38301 280 aaPredicted RBP6.11□□□□□ -1.43
RPT2YDL007W ICP55P40051 511 aa6.11□□□□□ -1.43
RPT2YDL007W LEM3P42838 414 aa6.11□□□□□ -1.43
RPT2YDL007W PPT1P53043 513 aa6.11□□□□□ -1.43
RPT2YDL007W NSG2P53898 299 aa6.11□□□□□ -1.43
RPT2YDL007W YNL011CP53980 444 aa6.11□□□□□ -1.43
RPT2YDL007W EMG1Q06287 252 aaKnown RBP6.11□□□□□ -1.43
RPT2YDL007W MNL2Q12205 849 aa6.11□□□□□ -1.43
RPT2YDL007W NYV1Q12255 253 aa6.11□□□□□ -1.43
RPT2YDL007W YKL068W-AQ3E826 78 aa6.11□□□□□ -1.43
RPT2YDL007W NHA1Q99271 985 aa6.11□□□□□ -1.43
RPT2YDL007W FRS2P15625 503 aaKnown RBP6.1□□□□□ -1.43
RPT2YDL007W MBR1P23493 339 aa6.1□□□□□ -1.43
RPT2YDL007W CCT5P40413 562 aaKnown RBP6.1□□□□□ -1.43
RPT2YDL007W FYV10P40492 516 aa6.1□□□□□ -1.43
RPT2YDL007W THI72Q08579 599 aa6.1□□□□□ -1.43
RPT2YDL007W VPS13Q07878 3144 aa6.09□□□□□ -1.43
RPT2YDL007W CDC16P09798 840 aa6.09□□□□□ -1.43
RPT2YDL007W ELM1P32801 640 aa6.09□□□□□ -1.43
RPT2YDL007W RPT1P33299 467 aaKnown RBP6.09□□□□□ -1.43
RPT2YDL007W KTR2P33550 425 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms