RNA–Protein interactions for RNA: YDL002C

NHP10, Transcript of Non-essential INO80 chromatin remodeling complex subunit, yeastyeast

Gene NHP10, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHP10YDL002C YPL109CQ02981 657 aa5.66□□□□□ -1.5
NHP10YDL002C SGD1Q06132 899 aa5.66□□□□□ -1.5
NHP10YDL002C PTC5Q12511 572 aa5.66□□□□□ -1.5
NHP10YDL002C AFG2P32794 780 aa5.65□□□□□ -1.5
NHP10YDL002C SHM2P37291 469 aaKnown RBP5.65□□□□□ -1.5
NHP10YDL002C SPT20P50875 604 aa5.65□□□□□ -1.5
NHP10YDL002C RSB1Q08417 382 aa5.65□□□□□ -1.5
NHP10YDL002C THO2P53552 1597 aaKnown RBP5.64□□□□□ -1.51
NHP10YDL002C PRE10P21242 288 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
NHP10YDL002C FAA3P39002 694 aa5.64□□□□□ -1.51
NHP10YDL002C YJR107WP47145 328 aa5.64□□□□□ -1.51
NHP10YDL002C TNA1P53322 534 aa5.64□□□□□ -1.51
NHP10YDL002C ORC1P54784 914 aaPredicted RBP5.64□□□□□ -1.51
NHP10YDL002C HOS3Q02959 697 aaKnown RBP5.64□□□□□ -1.51
NHP10YDL002C CYC1P00044 109 aaPredicted RBP5.63□□□□□ -1.51
NHP10YDL002C SEC23P15303 768 aaKnown RBP5.63□□□□□ -1.51
NHP10YDL002C CTS1P29029 562 aa5.63□□□□□ -1.51
NHP10YDL002C ABZ1P37254 787 aaPredicted RBP5.63□□□□□ -1.51
NHP10YDL002C LAM1P38851 1228 aa5.63□□□□□ -1.51
NHP10YDL002C GSF2Q04697 403 aaKnown RBP5.63□□□□□ -1.51
NHP10YDL002C ALG3P38179 458 aa5.62□□□□□ -1.51
NHP10YDL002C MEF2P39677 819 aa5.62□□□□□ -1.51
NHP10YDL002C SEC26P41810 973 aaKnown RBP5.62□□□□□ -1.51
NHP10YDL002C HNT2P49775 206 aa5.62□□□□□ -1.51
NHP10YDL002C GCN5Q03330 439 aa5.62□□□□□ -1.51
NHP10YDL002C YDR132CQ03900 495 aa5.62□□□□□ -1.51
NHP10YDL002C RPT1P33299 467 aaKnown RBP5.61□□□□□ -1.51
NHP10YDL002C MET10P39692 1035 aa5.61□□□□□ -1.51
NHP10YDL002C ROT1Q03691 256 aa5.61□□□□□ -1.51
NHP10YDL002C TUB2P02557 457 aaKnown RBP5.6□□□□□ -1.51
NHP10YDL002C SEC8P32855 1065 aa5.6□□□□□ -1.51
NHP10YDL002C BAP2P38084 609 aa5.6□□□□□ -1.51
NHP10YDL002C MGE1P38523 228 aa5.6□□□□□ -1.51
NHP10YDL002C TAT2P38967 592 aa5.6□□□□□ -1.51
NHP10YDL002C MPT5P39016 859 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51 RIP-Chip
NHP10YDL002C PIK1P39104 1066 aa5.6□□□□□ -1.51
NHP10YDL002C PIC2P40035 300 aa5.6□□□□□ -1.51
NHP10YDL002C SPO21Q12411 609 aa5.6□□□□□ -1.51
NHP10YDL002C HXK1P04806 485 aaKnown RBP5.59□□□□□ -1.51
NHP10YDL002C PUF4P25339 888 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51 RIP-Chip
NHP10YDL002C OYE2Q03558 400 aaKnown RBP5.59□□□□□ -1.51
NHP10YDL002C SVF1Q05515 481 aa5.59□□□□□ -1.51
NHP10YDL002C BPT1P14772 1559 aa5.59□□□□□ -1.52
NHP10YDL002C YPL260WQ08977 551 aa5.58□□□□□ -1.52
NHP10YDL002C SNF5P18480 905 aa5.57□□□□□ -1.52
NHP10YDL002C FYV10P40492 516 aa5.57□□□□□ -1.52
NHP10YDL002C RSM24Q03976 319 aa5.57□□□□□ -1.52
NHP10YDL002C RPN3P40016 523 aaKnown RBP5.56□□□□□ -1.52
NHP10YDL002C PLB2Q03674 706 aa5.56□□□□□ -1.52
NHP10YDL002C PNS1Q12412 539 aa5.56□□□□□ -1.52
NHP10YDL002C SGS1P35187 1447 aa5.56□□□□□ -1.52
NHP10YDL002C TAF13P11747 167 aa5.55□□□□□ -1.52
NHP10YDL002C CMP2P14747 604 aa5.55□□□□□ -1.52
NHP10YDL002C RAT1Q02792 1006 aaKnown RBP5.55□□□□□ -1.52
NHP10YDL002C ROD1Q02805 837 aa5.55□□□□□ -1.52
NHP10YDL002C GAL10P04397 699 aa5.54□□□□□ -1.52
NHP10YDL002C PRE9P23638 258 aaKnown RBP5.54□□□□□ -1.52
NHP10YDL002C RFC5P38251 354 aa5.54□□□□□ -1.52
NHP10YDL002C MRPS18P42847 217 aa5.54□□□□□ -1.52
NHP10YDL002C MCD1Q12158 566 aa5.54□□□□□ -1.52
NHP10YDL002C MCM2P29469 868 aa5.53□□□□□ -1.52
NHP10YDL002C YFL054CP43549 646 aa5.53□□□□□ -1.52
NHP10YDL002C DUS4Q06063 367 aa5.53□□□□□ -1.52
NHP10YDL002C HIR3P47171 1648 aa5.52□□□□□ -1.53
NHP10YDL002C MKK2P32491 506 aa5.52□□□□□ -1.53
NHP10YDL002C RXT3Q07458 294 aa5.52□□□□□ -1.53
NHP10YDL002C DOM34P33309 386 aa5.51□□□□□ -1.53
NHP10YDL002C YGR122WP53272 402 aa5.51□□□□□ -1.53
NHP10YDL002C GIS1Q03833 894 aa5.51□□□□□ -1.53
NHP10YDL002C SPR28Q04921 423 aa5.51□□□□□ -1.53
NHP10YDL002C SRM1P21827 482 aa5.5□□□□□ -1.53
NHP10YDL002C TRM2P33753 639 aa5.5□□□□□ -1.53
NHP10YDL002C SIW14P53965 281 aa5.5□□□□□ -1.53
NHP10YDL002C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
NHP10YDL002C RMD1Q03441 430 aa5.5□□□□□ -1.53
NHP10YDL002C ACK1Q07622 623 aaPredicted RBP5.5□□□□□ -1.53
NHP10YDL002C GPB1Q08886 897 aa5.5□□□□□ -1.53
NHP10YDL002C SVS1Q12254 260 aa5.5□□□□□ -1.53
NHP10YDL002C TAF2P23255 1407 aa5.49□□□□□ -1.53
NHP10YDL002C YER152CP10356 443 aa5.49□□□□□ -1.53
NHP10YDL002C KIN2P13186 1147 aaKnown RBP5.49□□□□□ -1.53
NHP10YDL002C CDC20P26309 610 aa5.49□□□□□ -1.53
NHP10YDL002C APL1P27351 700 aa5.49□□□□□ -1.53
NHP10YDL002C MLS1P30952 554 aa5.49□□□□□ -1.53
NHP10YDL002C RGD1P38339 666 aa5.49□□□□□ -1.53
NHP10YDL002C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
NHP10YDL002C RAD2P07276 1031 aa5.48□□□□□ -1.53
NHP10YDL002C OCA5P38738 679 aa5.48□□□□□ -1.53
NHP10YDL002C MCM6P53091 1017 aaKnown RBP5.48□□□□□ -1.53
NHP10YDL002C GTF1P53260 183 aaPredicted RBP5.48□□□□□ -1.53
NHP10YDL002C PBP1P53297 722 aaKnown RBP5.48□□□□□ -1.53
NHP10YDL002C TMA10Q06177 86 aa5.48□□□□□ -1.53
NHP10YDL002C MRL1Q06815 381 aa5.48□□□□□ -1.53
NHP10YDL002C CYC8P14922 966 aa5.47□□□□□ -1.53
NHP10YDL002C NAP1P25293 417 aaKnown RBP5.47□□□□□ -1.53
NHP10YDL002C HCM1P25364 564 aa5.47□□□□□ -1.53
NHP10YDL002C SYP1P25623 870 aaKnown RBP5.47□□□□□ -1.53
NHP10YDL002C RPS26AP39938 119 aaKnown RBP5.47□□□□□ -1.53
NHP10YDL002C RPS26BP39939 119 aaKnown RBP5.47□□□□□ -1.53
NHP10YDL002C ENT3P47160 408 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms