RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W AGP1P25376 633 aa3.42□□□□□ -1.86
SPB1YCL054W VBA5P36172 582 aa3.42□□□□□ -1.86
SPB1YCL054W YBR287WP38355 427 aa3.42□□□□□ -1.86
SPB1YCL054W YEN1P40028 759 aa3.42□□□□□ -1.86
SPB1YCL054W RTA1P53047 317 aa3.42□□□□□ -1.86
SPB1YCL054W YGL081WP53156 320 aa3.42□□□□□ -1.86
SPB1YCL054W YNR029CP53729 429 aaKnown RBP3.42□□□□□ -1.86
SPB1YCL054W TAF8Q03750 510 aa3.42□□□□□ -1.86
SPB1YCL054W MRL1Q06815 381 aa3.42□□□□□ -1.86
SPB1YCL054W YOL057WQ08225 711 aa3.42□□□□□ -1.86
SPB1YCL054W NOP14Q99207 810 aaKnown RBP3.42□□□□□ -1.86
SPB1YCL054W SNT2P53127 1403 aa3.42□□□□□ -1.86
SPB1YCL054W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SPB1YCL054W ABD1P32783 436 aaPredicted RBP3.42□□□□□ -1.86
SPB1YCL054W BET3P36149 193 aa3.42□□□□□ -1.86
SPB1YCL054W AMN1P38285 549 aaPredicted RBP3.42□□□□□ -1.86
SPB1YCL054W YGR125WP53273 1036 aa3.42□□□□□ -1.86
SPB1YCL054W SHE9Q04172 456 aa3.42□□□□□ -1.86
SPB1YCL054W HVG1P0CE11 249 aa3.41□□□□□ -1.86
SPB1YCL054W RPL8AP17076 256 aaKnown RBP3.41□□□□□ -1.86
SPB1YCL054W NPR1P22211 790 aa3.41□□□□□ -1.86
SPB1YCL054W THI4P32318 326 aa3.41□□□□□ -1.86
SPB1YCL054W PEX28P38848 579 aa3.41□□□□□ -1.86
SPB1YCL054W MSH4P40965 878 aaPredicted RBP3.41□□□□□ -1.86
SPB1YCL054W UTP14Q04500 899 aaKnown RBP3.41□□□□□ -1.86
SPB1YCL054W PMC1P38929 1173 aaPredicted RBP3.41□□□□□ -1.86
SPB1YCL054W TY1A-DR2Q03964 440 aaKnown RBP3.41□□□□□ -1.86
SPB1YCL054W YLR225CQ05948 407 aaKnown RBP3.41□□□□□ -1.86
SPB1YCL054W NTG2Q08214 380 aa3.41□□□□□ -1.86
SPB1YCL054W TMA46Q12000 345 aaKnown RBP3.41□□□□□ -1.86
SPB1YCL054W YPL066WQ12194 479 aa3.41□□□□□ -1.86
SPB1YCL054W ULS1Q08562 1619 aa3.41□□□□□ -1.86
SPB1YCL054W NUP170P38181 1502 aa3.41□□□□□ -1.86
SPB1YCL054W MLP2P40457 1679 aa3.41□□□□□ -1.86
SPB1YCL054W CIT1P00890 479 aa3.4□□□□□ -1.86
SPB1YCL054W YCK2P23292 546 aaKnown RBP3.4□□□□□ -1.86
SPB1YCL054W MSH2P25847 964 aa3.4□□□□□ -1.86
SPB1YCL054W IRR1P40541 1150 aa3.4□□□□□ -1.86
SPB1YCL054W NHA1Q99271 985 aa3.4□□□□□ -1.86
SPB1YCL054W SPO14P36126 1683 aa3.4□□□□□ -1.86
SPB1YCL054W PDR15Q04182 1529 aaKnown RBP3.4□□□□□ -1.87
SPB1YCL054W SRM1P21827 482 aa3.4□□□□□ -1.87
SPB1YCL054W MSH3P25336 1018 aa3.4□□□□□ -1.87
SPB1YCL054W CRP1P38845 465 aaKnown RBP3.4□□□□□ -1.87
SPB1YCL054W SLN1P39928 1220 aaPredicted RBP3.4□□□□□ -1.87
SPB1YCL054W TPM2P40414 161 aa3.4□□□□□ -1.87
SPB1YCL054W IRC24P40580 263 aa3.4□□□□□ -1.87
SPB1YCL054W SIW14P53965 281 aa3.4□□□□□ -1.87
SPB1YCL054W YPL034WQ03083 165 aa3.4□□□□□ -1.87
SPB1YCL054W HEH2Q03281 663 aa3.4□□□□□ -1.87
SPB1YCL054W OMA1P36163 345 aa3.39□□□□□ -1.87
SPB1YCL054W ALG14P38242 237 aa3.39□□□□□ -1.87
SPB1YCL054W EXO5P38289 585 aa3.39□□□□□ -1.87
SPB1YCL054W PAF1P38351 445 aa3.39□□□□□ -1.87
SPB1YCL054W APM2P38700 605 aa3.39□□□□□ -1.87
SPB1YCL054W UTP8P53276 713 aaKnown RBP3.39□□□□□ -1.87
SPB1YCL054W TPO2P53283 614 aa3.39□□□□□ -1.87
SPB1YCL054W FOL1P53848 824 aa3.39□□□□□ -1.87
SPB1YCL054W PMT7Q06644 662 aa3.39□□□□□ -1.87
SPB1YCL054W RGP1P16664 663 aa3.39□□□□□ -1.87
SPB1YCL054W HSP60P19882 572 aaKnown RBP3.39□□□□□ -1.87
SPB1YCL054W SBA1P28707 216 aaKnown RBP3.39□□□□□ -1.87
SPB1YCL054W LYP1P32487 611 aa3.39□□□□□ -1.87
SPB1YCL054W ROD1Q02805 837 aa3.39□□□□□ -1.87
SPB1YCL054W SPO75Q07798 868 aa3.39□□□□□ -1.87
SPB1YCL054W PDR12Q02785 1511 aa3.39□□□□□ -1.87
SPB1YCL054W NUP157P40064 1391 aaKnown RBP3.39□□□□□ -1.87
SPB1YCL054W COQ2P32378 372 aa3.38□□□□□ -1.87
SPB1YCL054W MKK2P32491 506 aa3.38□□□□□ -1.87
SPB1YCL054W TFA2P36145 328 aa3.38□□□□□ -1.87
SPB1YCL054W PRY1P47032 299 aa3.38□□□□□ -1.87
SPB1YCL054W PEX13P80667 386 aa3.38□□□□□ -1.87
SPB1YCL054W GLO4Q12320 285 aa3.38□□□□□ -1.87
SPB1YCL054W ADR1P07248 1323 aa3.38□□□□□ -1.87
SPB1YCL054W MRP8P35719 219 aa3.38□□□□□ -1.87
SPB1YCL054W NCL1P38205 684 aaKnown RBP3.38□□□□□ -1.87
SPB1YCL054W GGA2P38817 585 aaKnown RBP3.38□□□□□ -1.87
SPB1YCL054W YER156CP40093 338 aaKnown RBP3.38□□□□□ -1.87
SPB1YCL054W RSM26P47141 266 aa3.38□□□□□ -1.87
SPB1YCL054W GPG1P53130 126 aa3.38□□□□□ -1.87
SPB1YCL054W TIF35Q04067 274 aaKnown RBP3.38□□□□□ -1.87
SPB1YCL054W EAF1Q06337 982 aa3.38□□□□□ -1.87
SPB1YCL054W ATG13Q06628 738 aa3.38□□□□□ -1.87
SPB1YCL054W MCA1Q08601 432 aa3.38□□□□□ -1.87
SPB1YCL054W GDB1Q06625 1536 aa3.37□□□□□ -1.87
SPB1YCL054W TY1A-LR4P0C2I8 440 aaKnown RBP3.37□□□□□ -1.87
SPB1YCL054W TY1A-DR6P0CX70 440 aa3.37□□□□□ -1.87
SPB1YCL054W TY1A-ER1P0CX71 440 aa3.37□□□□□ -1.87
SPB1YCL054W TY1A-LR2P0CX72 440 aa3.37□□□□□ -1.87
SPB1YCL054W TY1A-PLP0CX73 440 aa3.37□□□□□ -1.87
SPB1YCL054W TY1A-JR1P0CX74 440 aa3.37□□□□□ -1.87
SPB1YCL054W TY1A-LR3P0CX75 440 aa3.37□□□□□ -1.87
SPB1YCL054W TY1A-ML2P0CX76 440 aa3.37□□□□□ -1.87
SPB1YCL054W TAF13P11747 167 aa3.37□□□□□ -1.87
SPB1YCL054W IDI1P15496 288 aa3.37□□□□□ -1.87
SPB1YCL054W GAL11P19659 1081 aa3.37□□□□□ -1.87
SPB1YCL054W CDC11P32458 415 aa3.37□□□□□ -1.87
SPB1YCL054W HBS1P32769 611 aaKnown RBP3.37□□□□□ -1.87
SPB1YCL054W MOT2P34909 587 aaKnown RBP3.37□□□□□ -1.87
SPB1YCL054W BUD21Q08492 214 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms