RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W SPR3P41901 512 aa6.68□□□□□ -1.34
SHM1YBR263W MDL2P33311 773 aa6.67□□□□□ -1.34
SHM1YBR263W BOI1P38041 980 aaKnown RBP6.67□□□□□ -1.34
SHM1YBR263W SEN54Q02825 467 aaPredicted RBP6.67□□□□□ -1.34
SHM1YBR263W KAR5Q04746 504 aa6.67□□□□□ -1.34
SHM1YBR263W LEU1P07264 779 aaKnown RBP6.66□□□□□ -1.34
SHM1YBR263W YFL034WP43564 1073 aa6.66□□□□□ -1.34
SHM1YBR263W YNL165WP53891 406 aa6.66□□□□□ -1.34
SHM1YBR263W ENO1P00924 437 aaKnown RBP6.66□□□□□ -1.34
SHM1YBR263W VAS1P07806 1104 aaKnown RBP6.66□□□□□ -1.34
SHM1YBR263W OSH3P38713 996 aaKnown RBP6.66□□□□□ -1.34
SHM1YBR263W BIM1P40013 344 aa6.66□□□□□ -1.34
SHM1YBR263W TY1A-DR2Q03964 440 aaKnown RBP6.66□□□□□ -1.34
SHM1YBR263W RIM20Q12033 661 aa6.66□□□□□ -1.34
SHM1YBR263W LAM4P38800 1345 aa6.65□□□□□ -1.34
SHM1YBR263W FLO1P32768 1537 aa6.65□□□□□ -1.35
SHM1YBR263W CBP1P07252 654 aa6.65□□□□□ -1.35
SHM1YBR263W MCM1P11746 286 aa6.65□□□□□ -1.35
SHM1YBR263W GEF1P37020 779 aa6.65□□□□□ -1.35
SHM1YBR263W AAP1P37898 856 aaKnown RBP6.65□□□□□ -1.35
SHM1YBR263W BRN1P38170 754 aa6.65□□□□□ -1.35
SHM1YBR263W PEA2P40091 420 aa6.65□□□□□ -1.35
SHM1YBR263W ATG32P40458 529 aa6.65□□□□□ -1.35
SHM1YBR263W IOC3P43596 787 aa6.65□□□□□ -1.35
SHM1YBR263W IRC8P47046 822 aa6.65□□□□□ -1.35
SHM1YBR263W PDC5P16467 563 aaKnown RBP6.64□□□□□ -1.35
SHM1YBR263W OPI1P21957 404 aa6.64□□□□□ -1.35
SHM1YBR263W YCK2P23292 546 aaKnown RBP6.64□□□□□ -1.35
SHM1YBR263W KNS1P32350 737 aaPredicted RBP6.64□□□□□ -1.35
SHM1YBR263W STM1P39015 273 aaKnown RBP6.64□□□□□ -1.35
SHM1YBR263W PIP2P52960 996 aa6.64□□□□□ -1.35
SHM1YBR263W TAH18Q12181 623 aa6.64□□□□□ -1.35
SHM1YBR263W TIF1P10081 395 aaKnown RBP6.63□□□□□ -1.35
SHM1YBR263W PPM2Q08282 695 aa6.63□□□□□ -1.35
SHM1YBR263W RPC31P17890 251 aa6.62□□□□□ -1.35
SHM1YBR263W COQ1P18900 473 aa6.62□□□□□ -1.35
SHM1YBR263W NIT1P40447 199 aa6.62□□□□□ -1.35
SHM1YBR263W YIL089WP40500 205 aa6.62□□□□□ -1.35
SHM1YBR263W NOP2P40991 618 aaKnown RBP6.62□□□□□ -1.35
SHM1YBR263W NRD1P53617 575 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
SHM1YBR263W HXT17P53631 564 aa6.62□□□□□ -1.35
SHM1YBR263W CWC15Q03772 175 aaKnown RBP6.62□□□□□ -1.35
SHM1YBR263W FPR4Q06205 392 aaPredicted RBP6.62□□□□□ -1.35
SHM1YBR263W TSC13Q99190 310 aa6.62□□□□□ -1.35
SHM1YBR263W RGP1P16664 663 aa6.61□□□□□ -1.35
SHM1YBR263W PEP12P32854 288 aa6.61□□□□□ -1.35
SHM1YBR263W MSC7P38694 644 aa6.61□□□□□ -1.35
SHM1YBR263W KEL1P38853 1164 aaKnown RBP6.61□□□□□ -1.35
SHM1YBR263W HXT13P39924 564 aa6.61□□□□□ -1.35
SHM1YBR263W ENP2P48234 707 aaKnown RBP6.61□□□□□ -1.35
SHM1YBR263W PCL8Q08966 492 aa6.61□□□□□ -1.35
SHM1YBR263W YDR215CQ12240 137 aa6.61□□□□□ -1.35
SHM1YBR263W CHO2P05374 869 aaKnown RBP6.6□□□□□ -1.35
SHM1YBR263W RAD53P22216 821 aa6.6□□□□□ -1.35
SHM1YBR263W ADP1P25371 1049 aa6.6□□□□□ -1.35
SHM1YBR263W MET1P36150 593 aa6.6□□□□□ -1.35
SHM1YBR263W YHL050CP38721 697 aa6.6□□□□□ -1.35
SHM1YBR263W PNT1P38969 423 aa6.6□□□□□ -1.35
SHM1YBR263W YPL260WQ08977 551 aa6.6□□□□□ -1.35
SHM1YBR263W KEL3Q08979 651 aaPredicted RBP6.6□□□□□ -1.35
SHM1YBR263W CSR2Q12734 1121 aa6.6□□□□□ -1.35
SHM1YBR263W PMA1P05030 918 aaKnown RBP6.6□□□□□ -1.35
SHM1YBR263W MLF3P32047 452 aa6.6□□□□□ -1.35
SHM1YBR263W RTS1P38903 757 aa6.6□□□□□ -1.35
SHM1YBR263W SLN1P39928 1220 aaPredicted RBP6.6□□□□□ -1.35
SHM1YBR263W YTA6P40328 754 aa6.6□□□□□ -1.35
SHM1YBR263W MSH4P40965 878 aaPredicted RBP6.6□□□□□ -1.35
SHM1YBR263W SBP1P10080 294 aaKnown RBP6.59□□□□□ -1.36
SHM1YBR263W YBL028CP38202 106 aa6.59□□□□□ -1.36
SHM1YBR263W Q0182Q9ZZW1 134 aa6.59□□□□□ -1.36
SHM1YBR263W RRP8P38961 392 aaKnown RBP6.58□□□□□ -1.36
SHM1YBR263W RPS15Q01855 142 aaKnown RBP6.58□□□□□ -1.36
SHM1YBR263W YDL124WQ07551 312 aaKnown RBP6.58□□□□□ -1.36
SHM1YBR263W SSF2Q12153 453 aaPredicted RBP6.58□□□□□ -1.36
SHM1YBR263W GSC2P40989 1895 aa6.57□□□□□ -1.36
SHM1YBR263W TUB2P02557 457 aaKnown RBP6.57□□□□□ -1.36
SHM1YBR263W CYT1P07143 309 aa6.57□□□□□ -1.36
SHM1YBR263W GAL2P13181 574 aa6.57□□□□□ -1.36
SHM1YBR263W PFK2P16862 959 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
SHM1YBR263W PRE8P23639 250 aa6.57□□□□□ -1.36
SHM1YBR263W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36 RIP-Chip
SHM1YBR263W TPS3P38426 1054 aaKnown RBP6.57□□□□□ -1.36
SHM1YBR263W VID27P40157 782 aa6.57□□□□□ -1.36
SHM1YBR263W RAD61Q99359 647 aa6.57□□□□□ -1.36
SHM1YBR263W RPP1AP05318 106 aaPredicted RBP6.56□□□□□ -1.36
SHM1YBR263W CIC1P38779 376 aaKnown RBP6.56□□□□□ -1.36
SHM1YBR263W CRG1P38892 291 aaRIP-Chip data6.56□□□□□ -1.36 RIP-Chip
SHM1YBR263W RPL34BP40525 121 aaKnown RBP6.56□□□□□ -1.36
SHM1YBR263W RRT6P53117 311 aaPredicted RBP6.56□□□□□ -1.36
SHM1YBR263W UFD2P54860 961 aa6.56□□□□□ -1.36
SHM1YBR263W MRD1Q06106 887 aaKnown RBP6.56□□□□□ -1.36
SHM1YBR263W SPN1Q06505 410 aaPredicted RBP6.56□□□□□ -1.36
SHM1YBR263W PGA3Q12746 312 aaKnown RBP6.56□□□□□ -1.36
SHM1YBR263W TRL1P09880 827 aaKnown RBP6.55□□□□□ -1.36
SHM1YBR263W SRM1P21827 482 aa6.55□□□□□ -1.36
SHM1YBR263W PRO3P32263 286 aaKnown RBP6.55□□□□□ -1.36
SHM1YBR263W RER2P35196 286 aa6.55□□□□□ -1.36
SHM1YBR263W MYO3P36006 1272 aa6.55□□□□□ -1.36
SHM1YBR263W ETP1P38748 585 aaKnown RBP6.55□□□□□ -1.36
SHM1YBR263W HDA1P53973 706 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms