RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	LYP1	P32487	611 aa		4.55	□□□□□ -1.68
CMD1	YBR109C	MKK2	P32491	506 aa		4.55	□□□□□ -1.68
CMD1	YBR109C	ADD66	P36040	267 aa		4.55	□□□□□ -1.68
CMD1	YBR109C	REI1	P38344	393 aa	Predicted RBP	4.55	□□□□□ -1.68
CMD1	YBR109C	TAT2	P38967	592 aa		4.55	□□□□□ -1.68
CMD1	YBR109C	IOC3	P43596	787 aa		4.55	□□□□□ -1.68
CMD1	YBR109C	CIT3	P43635	486 aa		4.55	□□□□□ -1.68
CMD1	YBR109C	YJL049W	P47048	450 aa		4.55	□□□□□ -1.68
CMD1	YBR109C	FAL1	Q12099	399 aa	Known RBP	4.55	□□□□□ -1.68
CMD1	YBR109C	ESP1	Q03018	1630 aa		4.54	□□□□□ -1.68
CMD1	YBR109C	BAS1	P22035	811 aa		4.54	□□□□□ -1.68
CMD1	YBR109C	GRX1	P25373	110 aa	Known RBP	4.54	□□□□□ -1.68
CMD1	YBR109C	SPF1	P39986	1215 aa	Known RBP	4.54	□□□□□ -1.68
CMD1	YBR109C	TYW3	P53177	273 aa		4.54	□□□□□ -1.68
CMD1	YBR109C	FAR11	P53917	953 aa		4.54	□□□□□ -1.68
CMD1	YBR109C	RAT1	Q02792	1006 aa	Known RBP	4.54	□□□□□ -1.68
CMD1	YBR109C	YMR074C	Q04773	145 aa		4.54	□□□□□ -1.68
CMD1	YBR109C	TDA5	Q06417	326 aa	Known RBP	4.54	□□□□□ -1.68
CMD1	YBR109C	ALG6	Q12001	544 aa	Known RBP	4.54	□□□□□ -1.68
CMD1	YBR109C	AFG2	P32794	780 aa		4.53	□□□□□ -1.68
CMD1	YBR109C	RKM2	Q03942	479 aa		4.53	□□□□□ -1.68
CMD1	YBR109C	YLL054C	Q12244	843 aa		4.53	□□□□□ -1.68
CMD1	YBR109C	POL1	P13382	1468 aa		4.53	□□□□□ -1.68
CMD1	YBR109C	SYP1	P25623	870 aa	Known RBP	4.52	□□□□□ -1.69
CMD1	YBR109C	WHI3	P34761	661 aa	Known RBP	4.52	□□□□□ -1.69
CMD1	YBR109C	KIP3	P53086	805 aa	Known RBP	4.52	□□□□□ -1.69
CMD1	YBR109C	YNR063W	P53749	607 aa		4.52	□□□□□ -1.69
CMD1	YBR109C	ORC3	P54790	616 aa		4.52	□□□□□ -1.69
CMD1	YBR109C	TIF35	Q04067	274 aa	Known RBP	4.52	□□□□□ -1.69
CMD1	YBR109C	SPO20	Q04359	397 aa		4.52	□□□□□ -1.69
CMD1	YBR109C	NSE3	Q05541	303 aa		4.52	□□□□□ -1.69
CMD1	YBR109C	FPR4	Q06205	392 aa	Predicted RBP	4.52	□□□□□ -1.69
CMD1	YBR109C	ESC2	Q06340	456 aa		4.52	□□□□□ -1.69
CMD1	YBR109C	BUD4	P47136	1447 aa		4.52	□□□□□ -1.69
CMD1	YBR109C	STU1	P38198	1513 aa		4.51	□□□□□ -1.69
CMD1	YBR109C	INO1	P11986	533 aa		4.51	□□□□□ -1.69
CMD1	YBR109C	DBP5	P20449	482 aa	Known RBP	4.51	□□□□□ -1.69
CMD1	YBR109C	AGP1	P25376	633 aa		4.51	□□□□□ -1.69
CMD1	YBR109C	SRP40	P32583	406 aa	Predicted RBP	4.51	□□□□□ -1.69
CMD1	YBR109C	ABD1	P32783	436 aa	Predicted RBP	4.51	□□□□□ -1.69
CMD1	YBR109C	MOT2	P34909	587 aa	Known RBP	4.51	□□□□□ -1.69
CMD1	YBR109C	ABZ1	P37254	787 aa	Predicted RBP	4.51	□□□□□ -1.69
CMD1	YBR109C	YAR028W	P39548	234 aa		4.51	□□□□□ -1.69
CMD1	YBR109C	YGR045C	P53229	120 aa		4.51	□□□□□ -1.69
CMD1	YBR109C	NAN1	Q02931	896 aa	Known RBP	4.51	□□□□□ -1.69
CMD1	YBR109C	YLR225C	Q05948	407 aa	Known RBP	4.51	□□□□□ -1.69
CMD1	YBR109C	BDF2	Q07442	638 aa		4.51	□□□□□ -1.69
CMD1	YBR109C	AVO1	Q08236	1176 aa		4.51	□□□□□ -1.69
CMD1	YBR109C	YOR059C	Q08448	450 aa	Known RBP	4.51	□□□□□ -1.69
CMD1	YBR109C	YOR223W	Q12015	292 aa		4.51	□□□□□ -1.69
CMD1	YBR109C	KOG1	P38873	1557 aa		4.5	□□□□□ -1.69
CMD1	YBR109C	RAD4	P14736	754 aa		4.5	□□□□□ -1.69
CMD1	YBR109C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
CMD1	YBR109C	SBA1	P28707	216 aa	Known RBP	4.5	□□□□□ -1.69
CMD1	YBR109C	AIM3	P38266	947 aa	Known RBP	4.5	□□□□□ -1.69
CMD1	YBR109C	ATG14	P38270	344 aa		4.5	□□□□□ -1.69
CMD1	YBR109C	CNN1	P43618	361 aa		4.5	□□□□□ -1.69
CMD1	YBR109C	ELA1	P53861	379 aa	Predicted RBP	4.5	□□□□□ -1.69
CMD1	YBR109C	DOT1	Q04089	582 aa	Known RBP	4.5	□□□□□ -1.69
CMD1	YBR109C	YPK9	Q12697	1472 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	SMC4	Q12267	1418 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	STE5	P32917	917 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	YKL091C	P33324	310 aa	Known RBP	4.49	□□□□□ -1.69
CMD1	YBR109C	ALG3	P38179	458 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	KRI1	P42846	591 aa	Known RBP	4.49	□□□□□ -1.69
CMD1	YBR109C	HUL5	P53119	910 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	RCM1	P53972	490 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	SHE9	Q04172	456 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	LAP2	Q10740	671 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	CDC53	Q12018	815 aa	Known RBP	4.49	□□□□□ -1.69
CMD1	YBR109C	YPL066W	Q12194	479 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	PTC5	Q12511	572 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	MYO4	P32492	1471 aa		4.49	□□□□□ -1.69
CMD1	YBR109C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
CMD1	YBR109C	VBA5	P36172	582 aa		4.48	□□□□□ -1.69
CMD1	YBR109C	YBR184W	P38299	523 aa		4.48	□□□□□ -1.69
CMD1	YBR109C	MPH1	P40562	993 aa		4.48	□□□□□ -1.69
CMD1	YBR109C	OYE3	P41816	400 aa	Predicted RBP	4.48	□□□□□ -1.69
CMD1	YBR109C	TIM54	P47045	478 aa		4.48	□□□□□ -1.69
CMD1	YBR109C	RIM8	P53179	542 aa		4.48	□□□□□ -1.69
CMD1	YBR109C	RPN4	Q03465	531 aa		4.48	□□□□□ -1.69
CMD1	YBR109C	RKM4	Q12504	494 aa		4.48	□□□□□ -1.69
CMD1	YBR109C	MLS1	P30952	554 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	MRP8	P35719	219 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	GPT2	P36148	743 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	MCM7	P38132	845 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
CMD1	YBR109C	RGD1	P38339	666 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	HSE1	P38753	452 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	YGL176C	P46945	554 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	VPS53	P47061	822 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	HNT2	P49775	206 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	RSA3	Q05942	220 aa	Known RBP	4.47	□□□□□ -1.69
CMD1	YBR109C	PNS1	Q12412	539 aa		4.47	□□□□□ -1.69
CMD1	YBR109C	CIT2	P08679	460 aa		4.46	□□□□□ -1.7
CMD1	YBR109C	RET1	P22276	1149 aa	Known RBP	4.46	□□□□□ -1.7
CMD1	YBR109C	ADP1	P25371	1049 aa		4.46	□□□□□ -1.7
CMD1	YBR109C	YKL107W	P34251	309 aa		4.46	□□□□□ -1.7
CMD1	YBR109C	QNS1	P38795	714 aa	Known RBP	4.46	□□□□□ -1.7
CMD1	YBR109C	MSH4	P40965	878 aa	Predicted RBP	4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms