RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	SAM3	Q08986	587 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	DPH6	Q12429	685 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	ACE2	P21192	770 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	AGP1	P25376	633 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	RAD16	P31244	790 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	MUD2	P36084	527 aa	Known RBP	7.94	□□□□□ -1.14
UBP13	YBL067C	NUT1	P53114	1132 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	ERP6	P53198	216 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	SPC19	Q03954	165 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	YPR097W	Q06839	1073 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	ISA1	Q07821	250 aa	Predicted RBP	7.94	□□□□□ -1.14
UBP13	YBL067C	ILS1	P09436	1072 aa	Known RBP	7.94	□□□□□ -1.14
UBP13	YBL067C	GUT2	P32191	649 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	IXR1	P33417	597 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	GCD10	P41814	478 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	EMW1	P42842	904 aa	Known RBP	7.94	□□□□□ -1.14
UBP13	YBL067C	BSC2	Q05611	235 aa		7.94	□□□□□ -1.14
UBP13	YBL067C	GLK1	P17709	500 aa	Known RBP	7.93	□□□□□ -1.14
UBP13	YBL067C	BNI5	P53890	448 aa	Known RBP	7.93	□□□□□ -1.14
UBP13	YBL067C	SHE9	Q04172	456 aa		7.93	□□□□□ -1.14
UBP13	YBL067C	YPR172W	Q06608	200 aa		7.93	□□□□□ -1.14
UBP13	YBL067C	PGA3	Q12746	312 aa	Known RBP	7.93	□□□□□ -1.14
UBP13	YBL067C	SPT7	P35177	1332 aa		7.93	□□□□□ -1.14
UBP13	YBL067C	CIC1	P38779	376 aa	Known RBP	7.93	□□□□□ -1.14
UBP13	YBL067C	POP2	P39008	433 aa		7.93	□□□□□ -1.14
UBP13	YBL067C	MDE1	P47095	244 aa		7.93	□□□□□ -1.14
UBP13	YBL067C	MET13	P53128	600 aa		7.93	□□□□□ -1.14
UBP13	YBL067C	YKU80	Q04437	629 aa		7.93	□□□□□ -1.14
UBP13	YBL067C	CMR1	Q12510	522 aa	Known RBP	7.93	□□□□□ -1.14
UBP13	YBL067C	TUF1	P02992	437 aa	Known RBP	7.92	□□□□□ -1.14
UBP13	YBL067C	SPC29	P33419	253 aa		7.92	□□□□□ -1.14
UBP13	YBL067C	TIM10	P87108	93 aa		7.92	□□□□□ -1.14
UBP13	YBL067C	TDA9	Q04545	1251 aa		7.92	□□□□□ -1.14
UBP13	YBL067C	RNH1	Q04740	348 aa		7.92	□□□□□ -1.14
UBP13	YBL067C	AAC3	P18238	307 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	APM2	P38700	605 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	RIM4	P38741	713 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	CCC2	P38995	1004 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	ATG3	P40344	310 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	QRI7	P43122	407 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	MOT3	P54785	490 aa	Known RBP	7.91	□□□□□ -1.14
UBP13	YBL067C	ATG20	Q07528	640 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	NOP58	Q12499	511 aa	Known RBP	7.91	□□□□□ -1.14
UBP13	YBL067C	TPD3	P31383	635 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	PET309	P32522	965 aa	Predicted RBP	7.91	□□□□□ -1.14
UBP13	YBL067C	ALF1	P53904	254 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	HFD1	Q04458	532 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	GIC2	Q06648	383 aa		7.91	□□□□□ -1.14
UBP13	YBL067C	VBA3	P25594	458 aa		7.9	□□□□□ -1.14
UBP13	YBL067C	HXT13	P39924	564 aa		7.9	□□□□□ -1.14
UBP13	YBL067C	HXT17	P53631	564 aa		7.9	□□□□□ -1.14
UBP13	YBL067C	BNI4	P53858	892 aa		7.9	□□□□□ -1.14
UBP13	YBL067C	HXT15	P54854	567 aa		7.9	□□□□□ -1.14
UBP13	YBL067C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	7.9	□□□□□ -1.14	not detected
UBP13	YBL067C	ESC8	Q08119	714 aa		7.9	□□□□□ -1.14
UBP13	YBL067C	APC5	Q08683	685 aa		7.9	□□□□□ -1.14
UBP13	YBL067C	HEM13	P11353	328 aa	Known RBP	7.9	□□□□□ -1.15
UBP13	YBL067C	RNA1	P11745	407 aa	Known RBP	7.9	□□□□□ -1.15
UBP13	YBL067C	RED1	P14291	827 aa		7.9	□□□□□ -1.15
UBP13	YBL067C	GFA1	P14742	717 aa	Known RBP	7.9	□□□□□ -1.15
UBP13	YBL067C	CDC60	P26637	1090 aa	Known RBP	7.9	□□□□□ -1.15
UBP13	YBL067C	PRY3	P47033	881 aa		7.9	□□□□□ -1.15
UBP13	YBL067C	YJR096W	P47137	282 aa		7.9	□□□□□ -1.15
UBP13	YBL067C	RAD17	P48581	401 aa		7.9	□□□□□ -1.15
UBP13	YBL067C	ULP1	Q02724	621 aa		7.9	□□□□□ -1.15
UBP13	YBL067C	YLR225C	Q05948	407 aa	Known RBP	7.9	□□□□□ -1.15
UBP13	YBL067C	ISR1	Q06098	443 aa	Known RBP	7.9	□□□□□ -1.15
UBP13	YBL067C	LAP2	Q10740	671 aa		7.9	□□□□□ -1.15
UBP13	YBL067C	SCM3	Q12334	223 aa		7.9	□□□□□ -1.15
UBP13	YBL067C	TRP2	P00899	507 aa	Known RBP	7.89	□□□□□ -1.15
UBP13	YBL067C	MAP2	P38174	421 aa	Known RBP	7.89	□□□□□ -1.15
UBP13	YBL067C	SSL2	Q00578	843 aa		7.89	□□□□□ -1.15
UBP13	YBL067C	AVO1	Q08236	1176 aa		7.89	□□□□□ -1.15
UBP13	YBL067C	RRG1	Q12167	365 aa	Predicted RBP	7.89	□□□□□ -1.15
UBP13	YBL067C	COB	P00163	385 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	TRK1	P12685	1235 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	RPC53	P25441	422 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	PCL2	P25693	308 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	UBS1	P38290	277 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	ALR2	P43553	858 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	HBS1	P32769	611 aa	Known RBP	7.88	□□□□□ -1.15
UBP13	YBL067C	DUR3	P33413	735 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	YKL133C	P36066	463 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	OCA1	P50946	238 aa	Predicted RBP	7.88	□□□□□ -1.15
UBP13	YBL067C	ADI1	Q03677	179 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	HBN1	Q96VH4	193 aa		7.88	□□□□□ -1.15
UBP13	YBL067C	RPS6A	P0CX37	236 aa	Known RBP	7.87	□□□□□ -1.15
UBP13	YBL067C	RPS6B	P0CX38	236 aa	Predicted RBP	7.87	□□□□□ -1.15
UBP13	YBL067C	PET123	P17558	318 aa		7.87	□□□□□ -1.15
UBP13	YBL067C	PRP5	P21372	849 aa	Predicted RBP	7.87	□□□□□ -1.15
UBP13	YBL067C	CBF2	P32504	956 aa		7.87	□□□□□ -1.15
UBP13	YBL067C	MRP8	P35719	219 aa		7.87	□□□□□ -1.15
UBP13	YBL067C	DUG1	P43616	481 aa	Known RBP	7.87	□□□□□ -1.15
UBP13	YBL067C	CIT3	P43635	486 aa		7.87	□□□□□ -1.15
UBP13	YBL067C	PEX21	P50091	288 aa		7.87	□□□□□ -1.15
UBP13	YBL067C	YML6	P51998	286 aa		7.87	□□□□□ -1.15
UBP13	YBL067C	KRE33	P53914	1056 aa	Known RBP	7.87	□□□□□ -1.15
UBP13	YBL067C	RAT1	Q02792	1006 aa	Known RBP	7.87	□□□□□ -1.15
UBP13	YBL067C	YCS4	Q06156	1176 aa		7.87	□□□□□ -1.15
UBP13	YBL067C	OPY2	Q06810	360 aa		7.87	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms