RNA–Protein interactions for RNA: YAR047C

YAR047C, Transcript of Dubious open reading frame, yeast

Gene YAR047C, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAR047C	YAR047C	RSB1	Q08417	382 aa		4.74	□□□□□ -1.65
YAR047C	YAR047C	MSC6	Q08818	692 aa	Known RBP	4.74	□□□□□ -1.65
YAR047C	YAR047C	DED1	P06634	604 aa	Known RBP	4.73	□□□□□ -1.65
YAR047C	YAR047C	TAF13	P11747	167 aa		4.73	□□□□□ -1.65
YAR047C	YAR047C	DOM34	P33309	386 aa		4.73	□□□□□ -1.65
YAR047C	YAR047C	STM1	P39015	273 aa	Known RBP	4.73	□□□□□ -1.65
YAR047C	YAR047C	YPL260W	Q08977	551 aa		4.73	□□□□□ -1.65
YAR047C	YAR047C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
YAR047C	YAR047C	SRM1	P21827	482 aa		4.71	□□□□□ -1.66
YAR047C	YAR047C	RPT1	P33299	467 aa	Known RBP	4.71	□□□□□ -1.66
YAR047C	YAR047C	RAT1	Q02792	1006 aa	Known RBP	4.71	□□□□□ -1.66
YAR047C	YAR047C	PNS1	Q12412	539 aa		4.71	□□□□□ -1.66
YAR047C	YAR047C	GAL10	P04397	699 aa		4.7	□□□□□ -1.66
YAR047C	YAR047C	THI12	P42883	340 aa		4.7	□□□□□ -1.66
YAR047C	YAR047C	THI5	P43534	340 aa		4.7	□□□□□ -1.66
YAR047C	YAR047C	YFL054C	P43549	646 aa		4.7	□□□□□ -1.66
YAR047C	YAR047C	THI11	P47183	340 aa		4.7	□□□□□ -1.66
YAR047C	YAR047C	ROD1	Q02805	837 aa		4.7	□□□□□ -1.66
YAR047C	YAR047C	RSM24	Q03976	319 aa		4.7	□□□□□ -1.66
YAR047C	YAR047C	THI13	Q07748	340 aa		4.7	□□□□□ -1.66
YAR047C	YAR047C	RIB2	Q12362	591 aa	Known RBP	4.7	□□□□□ -1.66
YAR047C	YAR047C	CDC20	P26309	610 aa		4.69	□□□□□ -1.66
YAR047C	YAR047C	MKK2	P32491	506 aa		4.69	□□□□□ -1.66
YAR047C	YAR047C	CDC6	P09119	513 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	CMP2	P14747	604 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	PRE9	P23638	258 aa	Known RBP	4.68	□□□□□ -1.66
YAR047C	YAR047C	TRM2	P33753	639 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	RFC5	P38251	354 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	ENT3	P47160	408 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	SIW14	P53965	281 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	ACK1	Q07622	623 aa	Predicted RBP	4.68	□□□□□ -1.66
YAR047C	YAR047C	PUS9	Q12069	462 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	MCD1	Q12158	566 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	TAD3	Q9URQ3	322 aa		4.68	□□□□□ -1.66
YAR047C	YAR047C	LST4	P34239	828 aa		4.67	□□□□□ -1.66
YAR047C	YAR047C	RGD1	P38339	666 aa		4.67	□□□□□ -1.66
YAR047C	YAR047C	HXT13	P39924	564 aa		4.67	□□□□□ -1.66
YAR047C	YAR047C	GNP1	P48813	663 aa		4.67	□□□□□ -1.66
YAR047C	YAR047C	YGR122W	P53272	402 aa		4.67	□□□□□ -1.66
YAR047C	YAR047C	HXT17	P53631	564 aa		4.67	□□□□□ -1.66
YAR047C	YAR047C	HXT15	P54854	567 aa		4.67	□□□□□ -1.66
YAR047C	YAR047C	RXT3	Q07458	294 aa		4.67	□□□□□ -1.66
YAR047C	YAR047C	STE11	P23561	717 aa		4.66	□□□□□ -1.66
YAR047C	YAR047C	TMA10	Q06177	86 aa		4.66	□□□□□ -1.66
YAR047C	YAR047C	GPB1	Q08886	897 aa		4.66	□□□□□ -1.66
YAR047C	YAR047C	YER152C	P10356	443 aa		4.65	□□□□□ -1.67
YAR047C	YAR047C	SEC20	P28791	383 aa		4.65	□□□□□ -1.67
YAR047C	YAR047C	MRPS18	P42847	217 aa		4.65	□□□□□ -1.67
YAR047C	YAR047C	MSE1	P48525	536 aa		4.65	□□□□□ -1.67
YAR047C	YAR047C	MNN10	P50108	393 aa	Known RBP	4.65	□□□□□ -1.67
YAR047C	YAR047C	SLI1	P53304	468 aa		4.65	□□□□□ -1.67
YAR047C	YAR047C	HCM1	P25364	564 aa		4.64	□□□□□ -1.67
YAR047C	YAR047C	SEC8	P32855	1065 aa		4.64	□□□□□ -1.67
YAR047C	YAR047C	MCM6	P53091	1017 aa	Known RBP	4.64	□□□□□ -1.67
YAR047C	YAR047C	VPS62	P53285	467 aa		4.64	□□□□□ -1.67
YAR047C	YAR047C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
YAR047C	YAR047C	SIZ1	Q04195	904 aa		4.64	□□□□□ -1.67
YAR047C	YAR047C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
YAR047C	YAR047C	SVS1	Q12254	260 aa		4.64	□□□□□ -1.67
YAR047C	YAR047C	KIN2	P13186	1147 aa	Known RBP	4.63	□□□□□ -1.67
YAR047C	YAR047C	SYP1	P25623	870 aa	Known RBP	4.63	□□□□□ -1.67
YAR047C	YAR047C	MLS1	P30952	554 aa		4.63	□□□□□ -1.67
YAR047C	YAR047C	IPL1	P38991	367 aa		4.63	□□□□□ -1.67
YAR047C	YAR047C	PBP1	P53297	722 aa	Known RBP	4.63	□□□□□ -1.67
YAR047C	YAR047C	YAP6	Q03935	383 aa		4.63	□□□□□ -1.67
YAR047C	YAR047C	ATG13	Q06628	738 aa		4.63	□□□□□ -1.67
YAR047C	YAR047C	NTO1	Q12311	748 aa		4.63	□□□□□ -1.67
YAR047C	YAR047C	RAD2	P07276	1031 aa		4.62	□□□□□ -1.67
YAR047C	YAR047C	CYC8	P14922	966 aa		4.62	□□□□□ -1.67
YAR047C	YAR047C	APL1	P27351	700 aa		4.62	□□□□□ -1.67
YAR047C	YAR047C	CNN1	P43618	361 aa		4.62	□□□□□ -1.67
YAR047C	YAR047C	SUN4	P53616	420 aa		4.62	□□□□□ -1.67
YAR047C	YAR047C	YLR224W	Q05947	369 aa		4.62	□□□□□ -1.67
YAR047C	YAR047C	DBP5	P20449	482 aa	Known RBP	4.61	□□□□□ -1.67
YAR047C	YAR047C	MPH1	P40562	993 aa		4.61	□□□□□ -1.67
YAR047C	YAR047C	MRL1	Q06815	381 aa		4.61	□□□□□ -1.67
YAR047C	YAR047C	HMI1	Q12039	706 aa		4.61	□□□□□ -1.67
YAR047C	YAR047C	BAS1	P22035	811 aa		4.6	□□□□□ -1.67
YAR047C	YAR047C	PMI40	P29952	429 aa	Known RBP	4.6	□□□□□ -1.67
YAR047C	YAR047C	PHO23	P50947	330 aa		4.6	□□□□□ -1.67
YAR047C	YAR047C	GTF1	P53260	183 aa	Predicted RBP	4.6	□□□□□ -1.67
YAR047C	YAR047C	PMA1	P05030	918 aa	Known RBP	4.59	□□□□□ -1.67
YAR047C	YAR047C	GCR1	P07261	785 aa		4.59	□□□□□ -1.67
YAR047C	YAR047C	ACE2	P21192	770 aa		4.59	□□□□□ -1.67
YAR047C	YAR047C	EMC1	P25574	760 aa		4.59	□□□□□ -1.67
YAR047C	YAR047C	RPS26A	P39938	119 aa	Known RBP	4.59	□□□□□ -1.67
YAR047C	YAR047C	RPS26B	P39939	119 aa	Known RBP	4.59	□□□□□ -1.67
YAR047C	YAR047C	AIM21	P40563	679 aa		4.59	□□□□□ -1.67
YAR047C	YAR047C	MSC2	Q03455	724 aa		4.59	□□□□□ -1.67
YAR047C	YAR047C	CHS7	P38843	316 aa		4.58	□□□□□ -1.68
YAR047C	YAR047C	GCV2	P49095	1034 aa		4.58	□□□□□ -1.68
YAR047C	YAR047C	SEN54	Q02825	467 aa	Predicted RBP	4.58	□□□□□ -1.68
YAR047C	YAR047C	NOP12	Q08208	459 aa	Known RBP	4.58	□□□□□ -1.68
YAR047C	YAR047C	DCG1	P32460	244 aa		4.57	□□□□□ -1.68
YAR047C	YAR047C	UGA2	P38067	497 aa		4.56	□□□□□ -1.68
YAR047C	YAR047C	MXR1	P40029	184 aa		4.56	□□□□□ -1.68
YAR047C	YAR047C	CTF4	Q01454	927 aa		4.56	□□□□□ -1.68
YAR047C	YAR047C	URN1	Q06525	465 aa	Known RBP	4.56	□□□□□ -1.68
YAR047C	YAR047C	BI4	P03879	638 aa		4.55	□□□□□ -1.68
YAR047C	YAR047C	RPL11A	P0C0W9	174 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 181.9 ms