RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 TUF1P02992 437 aaKnown RBP9.58□□□□□ -0.88
LSR1LSR1 RET1P22276 1149 aaKnown RBP9.58□□□□□ -0.88
LSR1LSR1 CLB1P24868 471 aa9.58□□□□□ -0.88
LSR1LSR1 SMY1P32364 656 aaKnown RBP9.58□□□□□ -0.88
LSR1LSR1 ATG32P40458 529 aa9.58□□□□□ -0.88
LSR1LSR1 YLR287CQ05881 355 aa9.58□□□□□ -0.88
LSR1LSR1 ATG23Q06671 453 aa9.58□□□□□ -0.88
LSR1LSR1 SLK19Q08581 821 aaKnown RBP9.58□□□□□ -0.88
LSR1LSR1 KEL3Q08979 651 aaPredicted RBP9.58□□□□□ -0.88
LSR1LSR1 CWC2Q12046 339 aaPredicted RBP9.58□□□□□ -0.88
LSR1LSR1 PPR1P07272 904 aaPredicted RBP9.57□□□□□ -0.88
LSR1LSR1 MIP1P15801 1254 aa9.57□□□□□ -0.88
LSR1LSR1 PET10P36139 283 aa9.57□□□□□ -0.88
LSR1LSR1 CIT3P43635 486 aa9.57□□□□□ -0.88
LSR1LSR1 CTK3P46963 296 aaPredicted RBP9.57□□□□□ -0.88
LSR1LSR1 NGL3Q03210 505 aa9.57□□□□□ -0.88
LSR1LSR1 ADY4Q05955 493 aa9.57□□□□□ -0.88
LSR1LSR1 SMD2Q06217 110 aaKnown RBP9.57□□□□□ -0.88
LSR1LSR1 CLF1Q12309 687 aaPredicted RBP9.57□□□□□ -0.88
LSR1LSR1 NUC1P08466 329 aa9.56□□□□□ -0.88
LSR1LSR1 ACE2P21192 770 aa9.56□□□□□ -0.88
LSR1LSR1 ISY1P21374 235 aaPredicted RBP9.56□□□□□ -0.88
LSR1LSR1 MUD2P36084 527 aaKnown RBP9.56□□□□□ -0.88
LSR1LSR1 SMF1P38925 575 aa9.56□□□□□ -0.88
LSR1LSR1 VPS41P38959 992 aa9.56□□□□□ -0.88
LSR1LSR1 ASE1P50275 885 aa9.56□□□□□ -0.88
LSR1LSR1 PUS6P53294 404 aa9.56□□□□□ -0.88
LSR1LSR1 SDA1P53313 767 aaKnown RBP9.56□□□□□ -0.88
LSR1LSR1 FOL1P53848 824 aa9.56□□□□□ -0.88
LSR1LSR1 RMP1Q12530 201 aa9.56□□□□□ -0.88
LSR1LSR1 FLO11P08640 1367 aa9.55□□□□□ -0.88
LSR1LSR1 CHS3P29465 1165 aa9.55□□□□□ -0.88
LSR1LSR1 HXT1P32465 570 aa9.55□□□□□ -0.88
LSR1LSR1 YKL091CP33324 310 aaKnown RBP9.55□□□□□ -0.88
LSR1LSR1 HUL4P40985 892 aa9.55□□□□□ -0.88
LSR1LSR1 DSE4P53753 1117 aa9.55□□□□□ -0.88
LSR1LSR1 VPS30Q02948 557 aa9.55□□□□□ -0.88
LSR1LSR1 UTP5Q04177 643 aaKnown RBP9.55□□□□□ -0.88
LSR1LSR1 SKG3Q06315 1026 aa9.55□□□□□ -0.88
LSR1LSR1 GAS5Q08193 484 aa9.55□□□□□ -0.88
LSR1LSR1 YPL216WQ08964 1102 aa9.55□□□□□ -0.88
LSR1LSR1 OSH2Q12451 1283 aa9.55□□□□□ -0.88
LSR1LSR1 FKS1P38631 1876 aaKnown RBP9.55□□□□□ -0.88
LSR1LSR1 TOM70P07213 617 aaKnown RBP9.54□□□□□ -0.88
LSR1LSR1 YEL076C-AP0CX16 216 aa9.54□□□□□ -0.88
LSR1LSR1 YLR464WP0CX17 216 aa9.54□□□□□ -0.88
LSR1LSR1 TUP1P16649 713 aa9.54□□□□□ -0.88
LSR1LSR1 PAP1P29468 568 aaKnown RBP9.54□□□□□ -0.88
LSR1LSR1 UGA2P38067 497 aa9.54□□□□□ -0.88
LSR1LSR1 YEL076CP39971 216 aa9.54□□□□□ -0.88
LSR1LSR1 GSM1P42950 618 aa9.54□□□□□ -0.88
LSR1LSR1 IES1P43579 692 aa9.54□□□□□ -0.88
LSR1LSR1 RSM7P47150 247 aa9.54□□□□□ -0.88
LSR1LSR1 CKA2P19454 339 aa9.53□□□□□ -0.88
LSR1LSR1 CKI1P20485 582 aa9.53□□□□□ -0.88
LSR1LSR1 PRE8P23639 250 aa9.53□□□□□ -0.88
LSR1LSR1 PDC6P26263 563 aaKnown RBP9.53□□□□□ -0.88
LSR1LSR1 YAP5P40574 245 aa9.53□□□□□ -0.88
LSR1LSR1 YGL140CP53120 1219 aa9.53□□□□□ -0.88
LSR1LSR1 YLR001CQ07895 862 aa9.53□□□□□ -0.88
LSR1LSR1 OM45P16547 393 aa9.52□□□□□ -0.89
LSR1LSR1 SRM1P21827 482 aa9.52□□□□□ -0.89
LSR1LSR1 RPS7AP26786 190 aaKnown RBP9.52□□□□□ -0.89
LSR1LSR1 GLN1P32288 370 aaKnown RBP9.52□□□□□ -0.89
LSR1LSR1 SRB4P32569 687 aa9.52□□□□□ -0.89
LSR1LSR1 SAS3P34218 831 aa9.52□□□□□ -0.89
LSR1LSR1 BYE1P36106 594 aa9.52□□□□□ -0.89
LSR1LSR1 SSP1P38871 571 aa9.52□□□□□ -0.89
LSR1LSR1 MIC19P43594 170 aa9.52□□□□□ -0.89
LSR1LSR1 BNI5P53890 448 aaKnown RBP9.52□□□□□ -0.89
LSR1LSR1 VTC3Q02725 835 aa9.52□□□□□ -0.89
LSR1LSR1 SOV1Q04748 898 aa9.52□□□□□ -0.89
LSR1LSR1 NOP6Q07623 225 aaKnown RBP9.52□□□□□ -0.89
LSR1LSR1 SPO75Q07798 868 aa9.52□□□□□ -0.89
LSR1LSR1 TUS1Q06412 1307 aa9.52□□□□□ -0.89
LSR1LSR1 CLB5P30283 435 aa9.51□□□□□ -0.89
LSR1LSR1 ECM32P32644 1121 aaKnown RBP9.51□□□□□ -0.89
LSR1LSR1 SLX5P32828 619 aaKnown RBP9.51□□□□□ -0.89
LSR1LSR1 RGD1P38339 666 aa9.51□□□□□ -0.89
LSR1LSR1 UBP5P39944 805 aa9.51□□□□□ -0.89
LSR1LSR1 CCM1P48237 864 aaPredicted RBP9.51□□□□□ -0.89
LSR1LSR1 TAD1P53065 400 aa9.51□□□□□ -0.89
LSR1LSR1 CBK1P53894 756 aa9.51□□□□□ -0.89
LSR1LSR1 POB3Q04636 552 aaKnown RBP9.51□□□□□ -0.89
LSR1LSR1 SFH1Q06168 426 aa9.51□□□□□ -0.89
LSR1LSR1 NUR1Q12066 484 aa9.51□□□□□ -0.89
LSR1LSR1 YOL087CQ99247 1116 aa9.51□□□□□ -0.89
LSR1LSR1 RNA1P11745 407 aaKnown RBP9.5□□□□□ -0.89
LSR1LSR1 CNS1P33313 385 aa9.5□□□□□ -0.89
LSR1LSR1 PTC4P38089 393 aa9.5□□□□□ -0.89
LSR1LSR1 ERT1P38140 529 aa9.5□□□□□ -0.89
LSR1LSR1 GAA1P39012 614 aa9.5□□□□□ -0.89
LSR1LSR1 PES4P39684 611 aa9.5□□□□□ -0.89
LSR1LSR1 BIM1P40013 344 aa9.5□□□□□ -0.89
LSR1LSR1 YMR102CQ03177 834 aa9.5□□□□□ -0.89
LSR1LSR1 SIL1Q08199 421 aa9.5□□□□□ -0.89
LSR1LSR1 PCL8Q08966 492 aa9.5□□□□□ -0.89
LSR1LSR1 PLP2Q12017 286 aa9.5□□□□□ -0.89
LSR1LSR1 MAK16P10962 306 aaPredicted RBP9.49□□□□□ -0.89
LSR1LSR1 RPC53P25441 422 aa9.49□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 199 ms