RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 COL5A2P05997 1499 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-216ENST00000641375 SIPA1L3O60292 1781 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-216ENST00000641375 BTBD11A6QL63 1104 aa20.82■□□□□ 0.92
PHGDH-216ENST00000641375 ZBTB7BO15156 539 aaPredicted RBP20.81■□□□□ 0.92
PHGDH-216ENST00000641375 HOXB7P09629 217 aa20.81■□□□□ 0.92
PHGDH-216ENST00000641375 SCN11AQ9UI33 1791 aa20.81■□□□□ 0.92
PHGDH-216ENST00000641375 PARP4Q9UKK3 1724 aaKnown RBP20.8■□□□□ 0.92
PHGDH-216ENST00000641375 HDAC1Q13547 482 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-216ENST00000641375 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
PHGDH-216ENST00000641375 EIF4A1P60842 406 aaKnown RBP20.79■□□□□ 0.92
PHGDH-216ENST00000641375 INTS3Q68E01 1043 aaKnown RBP20.79■□□□□ 0.92
PHGDH-216ENST00000641375 TOM1L2Q6ZVM7 507 aa20.79■□□□□ 0.92
PHGDH-216ENST00000641375 RGS12O14924 1447 aa20.79■□□□□ 0.92
PHGDH-216ENST00000641375 PHKG2P15735 406 aa20.78■□□□□ 0.92
PHGDH-216ENST00000641375 COL22A1Q8NFW1 1626 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-216ENST00000641375 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
PHGDH-216ENST00000641375 HDGFL1Q5TGJ6 251 aa20.76■□□□□ 0.91
PHGDH-216ENST00000641375 CARD10Q9BWT7 1032 aa20.76■□□□□ 0.91
PHGDH-216ENST00000641375 SKAP1Q86WV1 359 aa20.75■□□□□ 0.91
PHGDH-216ENST00000641375 EVA1CP58658 441 aa20.75■□□□□ 0.91
PHGDH-216ENST00000641375 DCAF5Q96JK2 942 aa20.75■□□□□ 0.91
PHGDH-216ENST00000641375 KDM6AO15550 1401 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-216ENST00000641375 SLC52A2Q9HAB3 445 aa20.73■□□□□ 0.91
PHGDH-216ENST00000641375 COL14A1Q05707 1796 aaKnown RBP20.73■□□□□ 0.91
PHGDH-216ENST00000641375 FLIIQ13045 1269 aa20.73■□□□□ 0.91
PHGDH-216ENST00000641375 G2E3Q7L622 706 aa20.73■□□□□ 0.91
PHGDH-216ENST00000641375 RGS3P49796 1198 aa20.72■□□□□ 0.91
PHGDH-216ENST00000641375 CYP27B1O15528 508 aa20.72■□□□□ 0.91
PHGDH-216ENST00000641375 KCNQ3O43525 872 aa20.72■□□□□ 0.91
PHGDH-216ENST00000641375 CCT4P50991 539 aaKnown RBP20.72■□□□□ 0.91
PHGDH-216ENST00000641375 MRC1P22897 1456 aa20.71■□□□□ 0.91
PHGDH-216ENST00000641375 PCDH11XQ9BZA7 1347 aa20.71■□□□□ 0.91
PHGDH-216ENST00000641375 PCDH11YQ9BZA8 1340 aa20.71■□□□□ 0.91
PHGDH-216ENST00000641375 PHLPP1O60346 1717 aa20.71■□□□□ 0.91
PHGDH-216ENST00000641375 PDE4AP27815 886 aa20.71■□□□□ 0.91
PHGDH-216ENST00000641375 NECTIN2Q92692 538 aa20.71■□□□□ 0.91
PHGDH-216ENST00000641375 STRN4Q9NRL3 753 aa20.71■□□□□ 0.91
PHGDH-216ENST00000641375 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
PHGDH-216ENST00000641375 IL2RBP14784 551 aa20.7■□□□□ 0.91
PHGDH-216ENST00000641375 FKBP5Q13451 457 aaPredicted RBP20.7■□□□□ 0.91
PHGDH-216ENST00000641375 ZCRB1Q8TBF4 217 aaKnown RBP20.7■□□□□ 0.9
PHGDH-216ENST00000641375 TOM1O60784 492 aa20.69■□□□□ 0.9
PHGDH-216ENST00000641375 LARP1Q6PKG0 1096 aaKnown RBP20.69■□□□□ 0.9
PHGDH-216ENST00000641375 SMC5Q8IY18 1101 aa20.69■□□□□ 0.9
PHGDH-216ENST00000641375 BACH2Q9BYV9 841 aa20.69■□□□□ 0.9
PHGDH-216ENST00000641375 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
PHGDH-216ENST00000641375 N4BP2Q86UW6 1770 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-216ENST00000641375 EIF2S2P20042 333 aaKnown RBP20.69■□□□□ 0.9
PHGDH-216ENST00000641375 GIGYF1O75420 1035 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-216ENST00000641375 ZNF790Q6PG37 636 aa20.68■□□□□ 0.9
PHGDH-216ENST00000641375 PXDNLA1KZ92 1463 aa20.68■□□□□ 0.9
PHGDH-216ENST00000641375 NFATC2IPQ8NCF5 419 aa20.68■□□□□ 0.9
PHGDH-216ENST00000641375 BTG4Q9NY30 223 aa20.68■□□□□ 0.9
PHGDH-216ENST00000641375 COL16A1Q07092 1604 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-216ENST00000641375 SLC4A10Q6U841 1118 aa20.67■□□□□ 0.9
PHGDH-216ENST00000641375 F6X3S4 739 aa20.66■□□□□ 0.9
PHGDH-216ENST00000641375 DBF4Q9UBU7 674 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-216ENST00000641375 GCC1Q96CN9 775 aa20.66■□□□□ 0.9
PHGDH-216ENST00000641375 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
PHGDH-216ENST00000641375 CHPF2Q9P2E5 772 aa20.65■□□□□ 0.9
PHGDH-216ENST00000641375 SHANK3Q9BYB0 1731 aa20.64■□□□□ 0.89
PHGDH-216ENST00000641375 CABP4P57796 275 aa20.64■□□□□ 0.89
PHGDH-216ENST00000641375 FAM161AQ3B820 660 aa20.64■□□□□ 0.89
PHGDH-216ENST00000641375 RPAP2Q8IXW5 612 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-216ENST00000641375 TTC5Q8N0Z6 440 aa20.63■□□□□ 0.89
PHGDH-216ENST00000641375 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-216ENST00000641375 PHAXQ9H814 394 aaKnown RBP20.63■□□□□ 0.89
PHGDH-216ENST00000641375 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
PHGDH-216ENST00000641375 SIRT2Q8IXJ6 389 aa20.62■□□□□ 0.89
PHGDH-216ENST00000641375 MEIS3Q99687 375 aa20.62■□□□□ 0.89
PHGDH-216ENST00000641375 SLC39A6Q13433 755 aa20.61■□□□□ 0.89
PHGDH-216ENST00000641375 NUCB1Q02818 461 aa20.61■□□□□ 0.89
PHGDH-216ENST00000641375 ANKRD44Q8N8A2 993 aa20.61■□□□□ 0.89
PHGDH-216ENST00000641375 ATP10DQ9P241 1426 aa20.6■□□□□ 0.89
PHGDH-216ENST00000641375 GNAI3P08754 354 aa20.6■□□□□ 0.89
PHGDH-216ENST00000641375 HYPKQ9NX55 129 aa20.6■□□□□ 0.89
PHGDH-216ENST00000641375 PLCH1Q4KWH8 1693 aa20.6■□□□□ 0.89
PHGDH-216ENST00000641375 PIP4K2BP78356 416 aa20.59■□□□□ 0.89
PHGDH-216ENST00000641375 USP35Q9P2H5 1018 aa20.59■□□□□ 0.89
PHGDH-216ENST00000641375 C5P01031 1676 aa20.59■□□□□ 0.89
PHGDH-216ENST00000641375 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
PHGDH-216ENST00000641375 C8orf34Q49A92 452 aa20.58■□□□□ 0.89
PHGDH-216ENST00000641375 CEP85Q6P2H3 762 aa20.58■□□□□ 0.88
PHGDH-216ENST00000641375 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.88
PHGDH-216ENST00000641375 ZNF496Q96IT1 587 aaPredicted RBP20.58■□□□□ 0.88
PHGDH-216ENST00000641375 PRAMEF22A3QJZ6 481 aa20.57■□□□□ 0.88
PHGDH-216ENST00000641375 GNAI2P04899 355 aa20.57■□□□□ 0.88
PHGDH-216ENST00000641375 SNRPA1P09661 255 aaKnown RBP20.57■□□□□ 0.88
PHGDH-216ENST00000641375 CHD1LQ86WJ1 897 aa20.57■□□□□ 0.88
PHGDH-216ENST00000641375 DDX21Q9NR30 783 aaKnown RBP eCLIP20.57■□□□□ 0.88
PHGDH-216ENST00000641375 DNAAF4Q8WXU2 420 aa20.56■□□□□ 0.88
PHGDH-216ENST00000641375 HMMRO75330 724 aa20.56■□□□□ 0.88
PHGDH-216ENST00000641375 SRCIN1Q9C0H9 1055 aa20.56■□□□□ 0.88
PHGDH-216ENST00000641375 DISP2A7MBM2 1401 aa20.56■□□□□ 0.88
PHGDH-216ENST00000641375 PI4KAP2A4QPH2 592 aa20.55■□□□□ 0.88
PHGDH-216ENST00000641375 PI4KAP1Q8N8J0 262 aa20.55■□□□□ 0.88
PHGDH-216ENST00000641375 DCTPP1Q9H773 170 aa20.55■□□□□ 0.88
PHGDH-216ENST00000641375 ANXA1P04083 346 aa20.55■□□□□ 0.88
PHGDH-216ENST00000641375 LAMB4A4D0S4 1761 aa20.54■□□□□ 0.88
PHGDH-216ENST00000641375 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms