RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TTC22Q5TAA0 569 aa21.22■□□□□ 0.99
PHGDH-211ENST00000641213 ALS2Q96Q42 1657 aa21.22■□□□□ 0.99
PHGDH-211ENST00000641213 GNAI2P04899 355 aa21.2■□□□□ 0.99
PHGDH-211ENST00000641213 LMOD2Q6P5Q4 547 aa21.2■□□□□ 0.99
PHGDH-211ENST00000641213 KRT28Q7Z3Y7 464 aa21.2■□□□□ 0.99
PHGDH-211ENST00000641213 OTUD7AQ8TE49 926 aaPredicted RBP21.2■□□□□ 0.99
PHGDH-211ENST00000641213 PXDNLA1KZ92 1463 aa21.2■□□□□ 0.98
PHGDH-211ENST00000641213 SMARCA5O60264 1052 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-211ENST00000641213 PLEKHG5O94827 1062 aa21.2■□□□□ 0.98
PHGDH-211ENST00000641213 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
PHGDH-211ENST00000641213 APBB1O00213 710 aa21.19■□□□□ 0.98
PHGDH-211ENST00000641213 AKAP4Q5JQC9 854 aa21.19■□□□□ 0.98
PHGDH-211ENST00000641213 HDGFL1Q5TGJ6 251 aa21.19■□□□□ 0.98
PHGDH-211ENST00000641213 C19orf44Q9H6X5 657 aa21.19■□□□□ 0.98
PHGDH-211ENST00000641213 STRCP1A6NGW2 1772 aa21.19■□□□□ 0.98
PHGDH-211ENST00000641213 PLEKHO1Q53GL0 409 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-211ENST00000641213 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-211ENST00000641213 GNAI3P08754 354 aa21.18■□□□□ 0.98
PHGDH-211ENST00000641213 EIF4A1P60842 406 aaKnown RBP21.18■□□□□ 0.98
PHGDH-211ENST00000641213 SPRYD3Q8NCJ5 442 aa21.17■□□□□ 0.98
PHGDH-211ENST00000641213 ANKRD24Q8TF21 1146 aa21.17■□□□□ 0.98
PHGDH-211ENST00000641213 PXDNQ92626 1479 aa21.17■□□□□ 0.98
PHGDH-211ENST00000641213 SIPA1L3O60292 1781 aaPredicted RBP21.17■□□□□ 0.98
PHGDH-211ENST00000641213 AMOTQ4VCS5 1084 aa21.17■□□□□ 0.98
PHGDH-211ENST00000641213 HSCBQ8IWL3 235 aa21.17■□□□□ 0.98
PHGDH-211ENST00000641213 KIF2CQ99661 725 aa21.17■□□□□ 0.98
PHGDH-211ENST00000641213 MST1RQ04912 1400 aa21.17■□□□□ 0.98
PHGDH-211ENST00000641213 SNX21Q969T3 373 aa21.16■□□□□ 0.98
PHGDH-211ENST00000641213 TUBGCP6Q96RT7 1819 aa21.16■□□□□ 0.98
PHGDH-211ENST00000641213 PHAXQ9H814 394 aaKnown RBP21.16■□□□□ 0.98
PHGDH-211ENST00000641213 AXIN2Q9Y2T1 843 aa21.16■□□□□ 0.98
PHGDH-211ENST00000641213 GSE1Q14687 1217 aa21.15■□□□□ 0.98
PHGDH-211ENST00000641213 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
PHGDH-211ENST00000641213 HOXB7P09629 217 aa21.14■□□□□ 0.98
PHGDH-211ENST00000641213 TEFQ10587 303 aa21.14■□□□□ 0.98
PHGDH-211ENST00000641213 KCNQ3O43525 872 aa21.14■□□□□ 0.97
PHGDH-211ENST00000641213 BTBD11A6QL63 1104 aa21.13■□□□□ 0.97
PHGDH-211ENST00000641213 EIF2S2P20042 333 aaKnown RBP21.13■□□□□ 0.97
PHGDH-211ENST00000641213 ATP8B2P98198 1209 aa21.13■□□□□ 0.97
PHGDH-211ENST00000641213 OVOS2A0A0G2JMS6 1433 aa21.13■□□□□ 0.97
PHGDH-211ENST00000641213 RNMTO43148 476 aaKnown RBP21.13■□□□□ 0.97
PHGDH-211ENST00000641213 EIF5BO60841 1220 aaKnown RBP21.13■□□□□ 0.97
PHGDH-211ENST00000641213 SDSP20132 328 aa21.13■□□□□ 0.97
PHGDH-211ENST00000641213 USP44Q9H0E7 712 aa21.13■□□□□ 0.97
PHGDH-211ENST00000641213 NCOA3Q9Y6Q9 1424 aa21.12■□□□□ 0.97
PHGDH-211ENST00000641213 ADAMTS7Q9UKP4 1686 aa21.12■□□□□ 0.97
PHGDH-211ENST00000641213 PNMA6EA0A0J9YXQ4 647 aa21.12■□□□□ 0.97
PHGDH-211ENST00000641213 C1orf141Q5JVX7 400 aa21.12■□□□□ 0.97
PHGDH-211ENST00000641213 CRYBG1Q9Y4K1 1723 aa21.12■□□□□ 0.97
PHGDH-211ENST00000641213 EXOC6BQ9Y2D4 811 aa21.11■□□□□ 0.97
PHGDH-211ENST00000641213 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
PHGDH-211ENST00000641213 OSBPL3Q9H4L5 887 aa21.11■□□□□ 0.97
PHGDH-211ENST00000641213 CHPF2Q9P2E5 772 aa21.11■□□□□ 0.97
PHGDH-211ENST00000641213 CHMP4AQ9BY43 222 aa21.1■□□□□ 0.97
PHGDH-211ENST00000641213 CHMP5Q9NZZ3 219 aa21.09■□□□□ 0.97
PHGDH-211ENST00000641213 TMEM94Q12767 1356 aa21.09■□□□□ 0.97
PHGDH-211ENST00000641213 COL18A1P39060 1754 aa21.09■□□□□ 0.97
PHGDH-211ENST00000641213 ATF3P18847 181 aa21.09■□□□□ 0.97
PHGDH-211ENST00000641213 PDE1AP54750 535 aa21.09■□□□□ 0.97
PHGDH-211ENST00000641213 UBTFL1P0CB47 393 aaPredicted RBP21.08■□□□□ 0.97
PHGDH-211ENST00000641213 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.97
PHGDH-211ENST00000641213 ERBB3P21860 1342 aa21.08■□□□□ 0.96
PHGDH-211ENST00000641213 ZC3H6P61129 1189 aaKnown RBP21.08■□□□□ 0.96
PHGDH-211ENST00000641213 LRRCC1Q9C099 1032 aa21.08■□□□□ 0.96
PHGDH-211ENST00000641213 SRCIN1Q9C0H9 1055 aa21.08■□□□□ 0.96
PHGDH-211ENST00000641213 IBTKQ9P2D0 1353 aaPredicted RBP21.08■□□□□ 0.96
PHGDH-211ENST00000641213 LMTK3Q96Q04 1460 aa21.08■□□□□ 0.96
PHGDH-211ENST00000641213 DCCP43146 1447 aa21.07■□□□□ 0.96
PHGDH-211ENST00000641213 SALL3Q9BXA9 1300 aa21.07■□□□□ 0.96
PHGDH-211ENST00000641213 CD2BP2O95400 341 aaKnown RBP21.06■□□□□ 0.96
PHGDH-211ENST00000641213 DDIT3P35638 169 aa21.06■□□□□ 0.96
PHGDH-211ENST00000641213 CASC1Q6TDU7 716 aa21.06■□□□□ 0.96
PHGDH-211ENST00000641213 RBM42Q9BTD8 480 aaKnown RBP21.06■□□□□ 0.96
PHGDH-211ENST00000641213 USP26Q9BXU7 913 aa21.06■□□□□ 0.96
PHGDH-211ENST00000641213 HEG1Q9ULI3 1381 aa21.05■□□□□ 0.96
PHGDH-211ENST00000641213 DDX17Q92841 729 aaKnown RBP21.05■□□□□ 0.96
PHGDH-211ENST00000641213 DNAAF4Q8WXU2 420 aa21.05■□□□□ 0.96
PHGDH-211ENST00000641213 PI4KAP2A4QPH2 592 aa21.04■□□□□ 0.96
PHGDH-211ENST00000641213 ANXA1P04083 346 aa21.04■□□□□ 0.96
PHGDH-211ENST00000641213 HSP90AB1P08238 724 aaKnown RBP21.04■□□□□ 0.96
PHGDH-211ENST00000641213 BEND3Q5T5X7 828 aa21.04■□□□□ 0.96
PHGDH-211ENST00000641213 PI4KAP1Q8N8J0 262 aa21.04■□□□□ 0.96
PHGDH-211ENST00000641213 SSH3Q8TE77 659 aa21.04■□□□□ 0.96
PHGDH-211ENST00000641213 ADCY9O60503 1353 aa21.03■□□□□ 0.96
PHGDH-211ENST00000641213 GIGYF1O75420 1035 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-211ENST00000641213 DBF4Q9UBU7 674 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-211ENST00000641213 XIRP1Q702N8 1843 aaKnown RBP21.03■□□□□ 0.96
PHGDH-211ENST00000641213 AK9Q5TCS8 1911 aa21.02■□□□□ 0.96
PHGDH-211ENST00000641213 K7ELQ4 463 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-211ENST00000641213 MX1P20591 662 aa21.01■□□□□ 0.95
PHGDH-211ENST00000641213 NBPF7P0C2Y1 421 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-211ENST00000641213 POLA2Q14181 598 aa21.01■□□□□ 0.95
PHGDH-211ENST00000641213 TSHZ3Q63HK5 1081 aa21■□□□□ 0.95
PHGDH-211ENST00000641213 PPP1R42Q7Z4L9 355 aa21■□□□□ 0.95
PHGDH-211ENST00000641213 C5P01031 1676 aa21■□□□□ 0.95
PHGDH-211ENST00000641213 RABEP1Q15276 862 aa21■□□□□ 0.95
PHGDH-211ENST00000641213 NLRP2Q9NX02 1062 aa21■□□□□ 0.95
PHGDH-211ENST00000641213 STAP2Q9UGK3 403 aa21■□□□□ 0.95
PHGDH-211ENST00000641213 REC8O95072 547 aa20.99■□□□□ 0.95
PHGDH-211ENST00000641213 MCM4P33991 863 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms