RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 TSPYL4Q9UJ04 414 aa5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 ADGRL1O94910 1474 aa5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 BCORL1Q5H9F3 1711 aa5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 CEP170Q5SW79 1584 aa5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 ERICH4A6NGS2 130 aa5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 G3BP1Q13283 466 aaKnown RBP eCLIP5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 JMYQ8N9B5 988 aa5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 RBM42Q9BTD8 480 aaKnown RBP5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 UPF3BQ9BZI7 483 aaKnown RBP5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 KIAA0556O60303 1618 aa5.91□□□□□ -1.46
HNRNPU-230ENST00000640657 F13A1P00488 732 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 IRX3P78415 501 aaPredicted RBP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 SNW1Q13573 536 aaKnown RBP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 BLOC1S2Q6QNY1 142 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 GRIN2AQ12879 1464 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 DHX16O60231 1041 aaKnown RBP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 SURF6O75683 361 aaKnown RBP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 GLRX3O76003 335 aaKnown RBP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 RDXP35241 583 aaKnown RBP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 GTF2F1P35269 517 aaKnown RBP eCLIP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 ZNF165P49910 485 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 CCDC186Q7Z3E2 898 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 ZSCAN16Q9H4T2 348 aaPredicted RBP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 C14orf93Q9H972 538 aaKnown RBP5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 TMEM63CQ9P1W3 806 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 SBNO2Q9Y2G9 1366 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 ARHGEF5Q12774 1597 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 SSH2Q76I76 1423 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 AOX1Q06278 1338 aa5.9□□□□□ -1.46
HNRNPU-230ENST00000640657 SLC4A2P04920 1241 aa5.9□□□□□ -1.47
HNRNPU-230ENST00000640657 PIP4K2AP48426 406 aaPredicted RBP5.9□□□□□ -1.47
HNRNPU-230ENST00000640657 MPNDQ8N594 471 aa5.9□□□□□ -1.47
HNRNPU-230ENST00000640657 KIF1BPQ96EK5 621 aa5.9□□□□□ -1.47
HNRNPU-230ENST00000640657 TRAPPC8Q9Y2L5 1435 aa5.9□□□□□ -1.47
HNRNPU-230ENST00000640657 PLB1Q6P1J6 1458 aa5.9□□□□□ -1.47
HNRNPU-230ENST00000640657 HMOX1P09601 288 aa5.9□□□□□ -1.47
HNRNPU-230ENST00000640657 SMARCE1Q969G3 411 aa5.9□□□□□ -1.47
HNRNPU-230ENST00000640657 MINK1Q8N4C8 1332 aaPredicted RBP5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 LAMC1P11047 1609 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 ATP8B1O43520 1251 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 IPO7O95373 1038 aaKnown RBP5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 CDR1P51861 262 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 JAKMIP1Q96N16 626 aaKnown RBP5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 ZNF830Q96NB3 372 aaPredicted RBP5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 ZNF692Q9BU19 519 aaPredicted RBP5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 ERCC6L2Q5T890 1561 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 REREQ9P2R6 1566 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 DDX58O95786 925 aaKnown RBP5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 PDE1AP54750 535 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 TRIM29Q14134 588 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 ATL3Q6DD88 541 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 ZFYVE9O95405 1425 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 MAGI2Q86UL8 1455 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 PLXNC1O60486 1568 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 NCOA3Q9Y6Q9 1424 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 TYRO3Q06418 890 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 MAP9Q49MG5 647 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 ZGPATQ8N5A5 531 aaKnown RBP5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 CARD14Q9BXL6 1004 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 RASSF4Q9H2L5 321 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 TNNQ9UQP3 1299 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 WDR7Q9Y4E6 1490 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 NPHP3Q7Z494 1330 aa5.89□□□□□ -1.47
HNRNPU-230ENST00000640657 VAMP4O75379 141 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 SKILP12757 684 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 FILIP1LQ4L180 1135 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 GIMAP6Q6P9H5 292 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 IPO4Q8TEX9 1081 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 RUFY1Q96T51 708 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 SPTLC3Q9NUV7 552 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 C9orf78Q9NZ63 289 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 CASTP20810 708 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 GJB2P29033 226 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 CASQ1P31415 396 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 TUBB2AQ13885 445 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 STK38Q15208 465 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 TAF7LQ5H9L4 462 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 GORABQ5T7V8 394 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 PLPPR3Q6T4P5 718 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 GPT2Q8TD30 523 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 TUBB2BQ9BVA1 445 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 SLC52A1Q9NWF4 448 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 CPLX1O14810 134 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 SERPINC1P01008 464 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 U2AF2P26368 475 aaKnown RBP eCLIP5.88□□□□□ -1.472e-9■□□□□ 9.8
HNRNPU-230ENST00000640657 AMPHP49418 695 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 GTF2A1P52655 376 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 IQCEQ6IPM2 695 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 CCDC83Q8IWF9 413 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 IMPACTQ9P2X3 320 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 CNPY2Q9Y2B0 182 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 ADAMTS12P58397 1594 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 ELP1O95163 1332 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 SOS1Q07889 1333 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 HMGB1P09429 215 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 DDIT3P35638 169 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 ARFGAP3Q9NP61 516 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 HMG20BQ9P0W2 317 aa5.88□□□□□ -1.47
HNRNPU-230ENST00000640657 PBRM1Q86U86 1689 aa5.87□□□□□ -1.47
HNRNPU-230ENST00000640657 KIAA0754O94854 1291 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms