RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 MAP2K3P46734 347 aa9.16□□□□□ -0.94
AP3S1-209ENST00000640413 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
AP3S1-209ENST00000640413 MTMR14Q8NCE2 650 aa9.16□□□□□ -0.94
AP3S1-209ENST00000640413 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
AP3S1-209ENST00000640413 CFHR5Q9BXR6 569 aa9.16□□□□□ -0.94
AP3S1-209ENST00000640413 GALNT6Q8NCL4 622 aa9.15□□□□□ -0.94
AP3S1-209ENST00000640413 ZNF592Q92610 1267 aa9.15□□□□□ -0.94
AP3S1-209ENST00000640413 KLRG1Q96E93 195 aa9.15□□□□□ -0.94
AP3S1-209ENST00000640413 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
AP3S1-209ENST00000640413 BCANQ96GW7 911 aa9.14□□□□□ -0.95
AP3S1-209ENST00000640413 SNRKQ9NRH2 765 aa9.14□□□□□ -0.95
AP3S1-209ENST00000640413 CEP126Q9P2H0 1117 aa9.14□□□□□ -0.95
AP3S1-209ENST00000640413 HRH3Q9Y5N1 445 aa9.14□□□□□ -0.95
AP3S1-209ENST00000640413 NDUFB9Q9Y6M9 179 aa9.14□□□□□ -0.95
AP3S1-209ENST00000640413 MYCP01106 439 aaPredicted RBP9.13□□□□□ -0.95
AP3S1-209ENST00000640413 UBAP2LQ14157 1087 aaKnown RBP9.13□□□□□ -0.95
AP3S1-209ENST00000640413 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
AP3S1-209ENST00000640413 XAGE2Q96GT9 111 aa9.13□□□□□ -0.95
AP3S1-209ENST00000640413 FHDC1Q9C0D6 1143 aaPredicted RBP9.13□□□□□ -0.95
AP3S1-209ENST00000640413 RUBCNLQ9H714 662 aa9.13□□□□□ -0.95
AP3S1-209ENST00000640413 A0A1B0GTH6 734 aa9.12□□□□□ -0.95
AP3S1-209ENST00000640413 TSGA10IPQ3SY00 556 aa9.12□□□□□ -0.95
AP3S1-209ENST00000640413 C4orf17Q53FE4 359 aa9.12□□□□□ -0.95
AP3S1-209ENST00000640413 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
AP3S1-209ENST00000640413 PHF24Q9UPV7 400 aa9.12□□□□□ -0.95
AP3S1-209ENST00000640413 KRBA1A5PL33 1030 aa9.11□□□□□ -0.95
AP3S1-209ENST00000640413 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
AP3S1-209ENST00000640413 GNASQ5JWF2 1037 aa9.11□□□□□ -0.95
AP3S1-209ENST00000640413 EDARADDQ8WWZ3 215 aa9.11□□□□□ -0.95
AP3S1-209ENST00000640413 RRAGCQ9HB90 399 aa9.11□□□□□ -0.95
AP3S1-209ENST00000640413 C2CD2LO14523 706 aa9.1□□□□□ -0.95
AP3S1-209ENST00000640413 MSX1P28360 303 aa9.1□□□□□ -0.95
AP3S1-209ENST00000640413 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
AP3S1-209ENST00000640413 XP32Q5T750 250 aa9.1□□□□□ -0.95
AP3S1-209ENST00000640413 MKL2Q9ULH7 1088 aa9.1□□□□□ -0.95
AP3S1-209ENST00000640413 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
AP3S1-209ENST00000640413 COL8A1P27658 744 aa9.09□□□□□ -0.95
AP3S1-209ENST00000640413 PGBD3Q8N328 593 aa9.09□□□□□ -0.95
AP3S1-209ENST00000640413 ABHD17AQ96GS6 310 aa9.09□□□□□ -0.95
AP3S1-209ENST00000640413 BMP4P12644 408 aa9.08□□□□□ -0.96
AP3S1-209ENST00000640413 GDF2Q9UK05 429 aaPredicted RBP9.08□□□□□ -0.96
AP3S1-209ENST00000640413 SOCS7O14512 581 aa9.07□□□□□ -0.96
AP3S1-209ENST00000640413 CTBSQ01459 385 aa9.07□□□□□ -0.96
AP3S1-209ENST00000640413 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
AP3S1-209ENST00000640413 EFHC2Q5JST6 749 aa9.07□□□□□ -0.96
AP3S1-209ENST00000640413 ETNK1Q9HBU6 452 aa9.07□□□□□ -0.96
AP3S1-209ENST00000640413 BNIP3LO60238 219 aa9.06□□□□□ -0.96
AP3S1-209ENST00000640413 BAG6P46379 1132 aa9.06□□□□□ -0.96
AP3S1-209ENST00000640413 LBRQ14739 615 aaKnown RBP9.06□□□□□ -0.96
AP3S1-209ENST00000640413 GOLGA6L1Q8N7Z2 621 aa9.06□□□□□ -0.96
AP3S1-209ENST00000640413 SUV39H2Q9H5I1 410 aa9.06□□□□□ -0.96
AP3S1-209ENST00000640413 ATXN7L1Q9ULK2 861 aaPredicted RBP9.06□□□□□ -0.96
AP3S1-209ENST00000640413 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
AP3S1-209ENST00000640413 HOXB4P17483 251 aaPredicted RBP9.05□□□□□ -0.96
AP3S1-209ENST00000640413 FGFR3P22607 806 aa9.05□□□□□ -0.96
AP3S1-209ENST00000640413 AMPD1P23109 780 aa9.05□□□□□ -0.96
AP3S1-209ENST00000640413 RHBDD1Q8TEB9 315 aa9.05□□□□□ -0.96
AP3S1-209ENST00000640413 NDFIP2Q9NV92 336 aa9.05□□□□□ -0.96
AP3S1-209ENST00000640413 GGA1Q9UJY5 639 aa9.05□□□□□ -0.96
AP3S1-209ENST00000640413 DOLKQ9UPQ8 538 aa9.05□□□□□ -0.96
AP3S1-209ENST00000640413 APBB1O00213 710 aa9.04□□□□□ -0.96
AP3S1-209ENST00000640413 BRPF1P55201 1214 aaPredicted RBP9.04□□□□□ -0.96
AP3S1-209ENST00000640413 GRIN2CQ14957 1233 aa9.04□□□□□ -0.96
AP3S1-209ENST00000640413 TLR1Q15399 786 aa9.04□□□□□ -0.96
AP3S1-209ENST00000640413 LINC00114Q6XXX2 140 aa9.04□□□□□ -0.96
AP3S1-209ENST00000640413 PPARGC1BQ86YN6 1023 aaKnown RBP9.04□□□□□ -0.96
AP3S1-209ENST00000640413 PHTF2Q8N3S3 785 aa9.04□□□□□ -0.96
AP3S1-209ENST00000640413 TBC1D2BQ9UPU7 963 aa9.04□□□□□ -0.96
AP3S1-209ENST00000640413 FURINP09958 794 aa9.03□□□□□ -0.96
AP3S1-209ENST00000640413 USP4Q13107 963 aa9.03□□□□□ -0.96
AP3S1-209ENST00000640413 OXLD1Q5BKU9 147 aa9.03□□□□□ -0.96
AP3S1-209ENST00000640413 PLA2G4AP47712 749 aa9.02□□□□□ -0.97
AP3S1-209ENST00000640413 SLCO4C1Q6ZQN7 724 aa9.02□□□□□ -0.97
AP3S1-209ENST00000640413 CRISPLD1Q9H336 500 aa9.02□□□□□ -0.97
AP3S1-209ENST00000640413 SLFNL1Q499Z3 407 aa9.01□□□□□ -0.97
AP3S1-209ENST00000640413 RNF135Q8IUD6 432 aa9.01□□□□□ -0.97
AP3S1-209ENST00000640413 BTBD6Q96KE9 485 aa9.01□□□□□ -0.97
AP3S1-209ENST00000640413 EIF4G2P78344 907 aaKnown RBP eCLIP9□□□□□ -0.97
AP3S1-209ENST00000640413 TBC1D9Q6ZT07 1266 aa9□□□□□ -0.97
AP3S1-209ENST00000640413 ALYREFQ86V81 257 aaKnown RBP9□□□□□ -0.97
AP3S1-209ENST00000640413 ZCCHC2Q9C0B9 1178 aaKnown RBP9□□□□□ -0.97
AP3S1-209ENST00000640413 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
AP3S1-209ENST00000640413 NEURL1BA8MQ27 555 aa8.99□□□□□ -0.97
AP3S1-209ENST00000640413 EPXP11678 715 aa8.99□□□□□ -0.97
AP3S1-209ENST00000640413 IRF5Q13568 498 aa8.99□□□□□ -0.97
AP3S1-209ENST00000640413 AIDAQ96BJ3 306 aa8.99□□□□□ -0.97
AP3S1-209ENST00000640413 SCNN1DP51172 638 aa8.98□□□□□ -0.97
AP3S1-209ENST00000640413 PCDHGC4Q9Y5F7 938 aa8.98□□□□□ -0.97
AP3S1-209ENST00000640413 C1QTNF9BB2RNN3 333 aa8.97□□□□□ -0.97
AP3S1-209ENST00000640413 GNB5O14775 395 aa8.97□□□□□ -0.97
AP3S1-209ENST00000640413 INHAP05111 366 aa8.97□□□□□ -0.97
AP3S1-209ENST00000640413 ARAFP10398 606 aa8.97□□□□□ -0.97
AP3S1-209ENST00000640413 ATP4AP20648 1035 aa8.97□□□□□ -0.97
AP3S1-209ENST00000640413 GDF10P55107 478 aa8.97□□□□□ -0.97
AP3S1-209ENST00000640413 FIGNL1Q6PIW4 674 aa8.97□□□□□ -0.97
AP3S1-209ENST00000640413 HCN2Q9UL51 889 aa8.97□□□□□ -0.97
AP3S1-209ENST00000640413 VAC14Q08AM6 782 aa8.96□□□□□ -0.98
AP3S1-209ENST00000640413 CHIC2Q9UKJ5 165 aa8.96□□□□□ -0.98
AP3S1-209ENST00000640413 DCDC2BA2VCK2 349 aa8.95□□□□□ -0.98
AP3S1-209ENST00000640413 ATXN7O15265 892 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms