RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 SLURP2P0DP57 97 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 ITGA6P23229 1130 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 SCNN1DP51172 638 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 GDF10P55107 478 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 CENPCQ03188 943 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 LYSMD3Q7Z3D4 306 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 PRICKLE2Q7Z3G6 844 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 TRIM50Q86XT4 487 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 XAGE2Q96GT9 111 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 CNTNAP3BQ96NU0 1288 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 COL25A1Q9BXS0 654 aaPredicted RBP6.43□□□□□ -1.38
ATM-230ENST00000640388 CNTNAP3Q9BZ76 1288 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 TIMELESSQ9UNS1 1208 aa6.43□□□□□ -1.38
ATM-230ENST00000640388 INHAP05111 366 aa6.42□□□□□ -1.38
ATM-230ENST00000640388 RFX1P22670 979 aa6.42□□□□□ -1.38
ATM-230ENST00000640388 GPC1P35052 558 aa6.42□□□□□ -1.38
ATM-230ENST00000640388 ATP1A2P50993 1020 aa6.42□□□□□ -1.38
ATM-230ENST00000640388 CLDN10P78369 228 aa6.42□□□□□ -1.38
ATM-230ENST00000640388 CFAP70Q5T0N1 1121 aa6.42□□□□□ -1.38
ATM-230ENST00000640388 OGFOD1Q8N543 542 aa6.42□□□□□ -1.38
ATM-230ENST00000640388 CCDC97Q96F63 343 aaPredicted RBP6.42□□□□□ -1.38
ATM-230ENST00000640388 SERTAD1Q9UHV2 236 aa6.42□□□□□ -1.38
ATM-230ENST00000640388 SENP3-EIF4A1A0A087X0R7 540 aa6.41□□□□□ -1.38
ATM-230ENST00000640388 TMEM229AB2RXF0 380 aa6.41□□□□□ -1.38
ATM-230ENST00000640388 ZBTB7BO15156 539 aaPredicted RBP6.41□□□□□ -1.38
ATM-230ENST00000640388 RASA1P20936 1047 aa6.41□□□□□ -1.38
ATM-230ENST00000640388 ZNF385CQ66K41 422 aaPredicted RBP6.41□□□□□ -1.38
ATM-230ENST00000640388 GRIP2Q9C0E4 1043 aa6.41□□□□□ -1.38
ATM-230ENST00000640388 DNAAF2Q9NVR5 837 aaKnown RBP6.41□□□□□ -1.38
ATM-230ENST00000640388 ADAMTS8Q9UP79 889 aa6.41□□□□□ -1.38
ATM-230ENST00000640388 HRH3Q9Y5N1 445 aa6.41□□□□□ -1.38
ATM-230ENST00000640388 RHOQP17081 205 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 GTF2E1P29083 439 aaPredicted RBP6.4□□□□□ -1.38
ATM-230ENST00000640388 POU4F2Q12837 409 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 TLR1Q15399 786 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 CDCA8Q53HL2 280 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 RNFT1Q5M7Z0 435 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 KANK4Q5T7N3 995 aaPredicted RBP6.4□□□□□ -1.38
ATM-230ENST00000640388 CCDC102BQ68D86 513 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.4□□□□□ -1.38
ATM-230ENST00000640388 TPCN2Q8NHX9 752 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 ZNF594Q96JF6 807 aaPredicted RBP6.4□□□□□ -1.38
ATM-230ENST00000640388 ZSCAN10Q96SZ4 725 aaPredicted RBP6.4□□□□□ -1.38
ATM-230ENST00000640388 VRTNQ9H8Y1 702 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 SERPINA10Q9UK55 444 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 KIAA1024Q9UPX6 916 aa6.4□□□□□ -1.38
ATM-230ENST00000640388 SUPT5HO00267 1087 aaKnown RBP6.39□□□□□ -1.39
ATM-230ENST00000640388 WASLO00401 505 aaPredicted RBP6.39□□□□□ -1.39
ATM-230ENST00000640388 ARHGEF15O94989 841 aa6.39□□□□□ -1.39
ATM-230ENST00000640388 RASSF7Q02833 373 aa6.39□□□□□ -1.39
ATM-230ENST00000640388 TMEM214Q6NUQ4 689 aaKnown RBP6.39□□□□□ -1.39
ATM-230ENST00000640388 LARP1Q6PKG0 1096 aaKnown RBP6.39□□□□□ -1.39
ATM-230ENST00000640388 SV2AQ7L0J3 742 aa6.39□□□□□ -1.39
ATM-230ENST00000640388 LARGE2Q8N3Y3 721 aa6.39□□□□□ -1.39
ATM-230ENST00000640388 TMEM151AQ8N4L1 468 aa6.39□□□□□ -1.39
ATM-230ENST00000640388 FHDC1Q9C0D6 1143 aaPredicted RBP6.39□□□□□ -1.39
ATM-230ENST00000640388 C1orf115Q9H7X2 142 aa6.39□□□□□ -1.39
ATM-230ENST00000640388 BACH1O14867 736 aa6.38□□□□□ -1.39
ATM-230ENST00000640388 SMTNP53814 917 aa6.38□□□□□ -1.39
ATM-230ENST00000640388 NBPF10Q6P3W6 841 aaKnown RBP6.38□□□□□ -1.39
ATM-230ENST00000640388 NBPF15Q8N660 670 aa6.38□□□□□ -1.39
ATM-230ENST00000640388 ZNF358Q9NW07 568 aa6.38□□□□□ -1.39
ATM-230ENST00000640388 RBM19Q9Y4C8 960 aaKnown RBP6.38□□□□□ -1.39
ATM-230ENST00000640388 SPATA31C2B4DYI2 1134 aa6.37□□□□□ -1.39
ATM-230ENST00000640388 GDF11O95390 407 aa6.37□□□□□ -1.39
ATM-230ENST00000640388 PHKA2P46019 1235 aa6.37□□□□□ -1.39
ATM-230ENST00000640388 CRTC2Q53ET0 693 aaPredicted RBP6.37□□□□□ -1.39
ATM-230ENST00000640388 TAS1R3Q7RTX0 852 aa6.37□□□□□ -1.39
ATM-230ENST00000640388 VWA5B2Q8N398 1253 aa6.37□□□□□ -1.39
ATM-230ENST00000640388 CCDC82Q8N4S0 544 aa6.37□□□□□ -1.39
ATM-230ENST00000640388 SLC4A9Q96Q91 983 aa6.37□□□□□ -1.39
ATM-230ENST00000640388 A6NJY4 79 aa6.36□□□□□ -1.39
ATM-230ENST00000640388 SFI1A8K8P3 1242 aa6.36□□□□□ -1.39
ATM-230ENST00000640388 SRSF11Q05519 484 aaKnown RBP6.36□□□□□ -1.39
ATM-230ENST00000640388 PTK7Q13308 1070 aa6.36□□□□□ -1.39
ATM-230ENST00000640388 GNASQ5JWF2 1037 aa6.36□□□□□ -1.39
ATM-230ENST00000640388 PPARGC1BQ86YN6 1023 aaKnown RBP6.36□□□□□ -1.39
ATM-230ENST00000640388 SIX5Q8N196 739 aa6.36□□□□□ -1.39
ATM-230ENST00000640388 SVOPQ8N4V2 548 aa6.36□□□□□ -1.39
ATM-230ENST00000640388 KCTD17Q8N5Z5 321 aa6.36□□□□□ -1.39
ATM-230ENST00000640388 GMCL1Q96IK5 515 aa6.36□□□□□ -1.39
ATM-230ENST00000640388 DNMT3AQ9Y6K1 912 aaPredicted RBP6.36□□□□□ -1.39
ATM-230ENST00000640388 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.35□□□□□ -1.39
ATM-230ENST00000640388 CDC14CA4D256 554 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 FAM196BA6NMK8 535 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L15C9J2P7 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L10C9JJH3 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L13C9JLJ4 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L12C9JPN9 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L11C9JVI0 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L21D6R901 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L18D6R9N7 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L22D6RA61 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L17D6RBQ6 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L19D6RCP7 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L20D6RJB6 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 DKK1O94907 266 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 USP17L24Q0WX57 530 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 DPYDQ12882 1025 aa6.35□□□□□ -1.39
ATM-230ENST00000640388 SUZ12Q15022 739 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms