RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
HNRNPU-224ENST00000640056 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
HNRNPU-224ENST00000640056 THSD7AQ9UPZ6 1657 aa12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 TMEM57Q8N5G2 664 aa12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 LMO7Q8WWI1 1683 aa12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 PTMSP20962 102 aa12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 SKOR2Q2VWA4 1001 aaPredicted RBP12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 HDGFL2Q7Z4V5 671 aaPredicted RBP12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 TNPO1Q92973 898 aaKnown RBP12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 GBP4Q96PP9 640 aa12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 CAMTA1Q9Y6Y1 1673 aa12.49□□□□□ -0.41
HNRNPU-224ENST00000640056 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
HNRNPU-224ENST00000640056 COL5A2P05997 1499 aaPredicted RBP12.48□□□□□ -0.41
HNRNPU-224ENST00000640056 BAG6P46379 1132 aa12.48□□□□□ -0.41
HNRNPU-224ENST00000640056 R3HDM1Q15032 1099 aaKnown RBP12.48□□□□□ -0.41
HNRNPU-224ENST00000640056 TERF2IPQ9NYB0 399 aa12.48□□□□□ -0.41
HNRNPU-224ENST00000640056 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 ESPNB1AK53 854 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 FAM196AQ6ZSG2 479 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 CRB1P82279 1406 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 ABCC6O95255 1503 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 CEP350Q5VT06 3117 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 BMP2KLQ5H9B9 411 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 LARP1Q6PKG0 1096 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 ARHGEF25Q86VW2 580 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
HNRNPU-224ENST00000640056 DISP2A7MBM2 1401 aa12.46□□□□□ -0.41
HNRNPU-224ENST00000640056 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-224ENST00000640056 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-224ENST00000640056 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-224ENST00000640056 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
HNRNPU-224ENST00000640056 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
HNRNPU-224ENST00000640056 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.42
HNRNPU-224ENST00000640056 GLIPR1L2Q4G1C9 344 aa12.45□□□□□ -0.42
HNRNPU-224ENST00000640056 LNPKQ9C0E8 428 aa12.45□□□□□ -0.42
HNRNPU-224ENST00000640056 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
HNRNPU-224ENST00000640056 RIPK4P57078 832 aa12.45□□□□□ -0.42
HNRNPU-224ENST00000640056 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 RRP9O43818 475 aaKnown RBP12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 TRIM44Q96DX7 344 aaPredicted RBP12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 KIF2CQ99661 725 aa12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 WDR17Q8IZU2 1322 aa12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 AKAP12Q02952 1782 aa12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 GAS2L3Q86XJ1 694 aa12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 GCC1Q96CN9 775 aa12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 CHMP4BQ9H444 224 aaKnown RBP12.44□□□□□ -0.42
HNRNPU-224ENST00000640056 PPP1R1BQ9UD71 204 aaPredicted RBP12.43□□□□□ -0.42
HNRNPU-224ENST00000640056 HSP90AA2PQ14568 343 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-224ENST00000640056 TOM1L2Q6ZVM7 507 aa12.42□□□□□ -0.42
HNRNPU-224ENST00000640056 COL3A1P02461 1466 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-224ENST00000640056 EP400Q96L91 3159 aa12.42□□□□□ -0.42
HNRNPU-224ENST00000640056 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-224ENST00000640056 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 USP54Q70EL1 1684 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 NFAT5O94916 1531 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 A0A1W2PP64 1363 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 MON2Q7Z3U7 1717 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 ZBTB7CA1YPR0 619 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 ZBTB7BO15156 539 aaPredicted RBP12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 ANKRD45Q5TZF3 282 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
HNRNPU-224ENST00000640056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.4□□□□□ -0.42
HNRNPU-224ENST00000640056 TNS4Q8IZW8 715 aa12.4□□□□□ -0.42
HNRNPU-224ENST00000640056 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
HNRNPU-224ENST00000640056 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
HNRNPU-224ENST00000640056 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
HNRNPU-224ENST00000640056 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
HNRNPU-224ENST00000640056 GOLGA6L22H0YM25 854 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 FYB1O15117 783 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 CD2BP2O95400 341 aaKnown RBP12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 DDB1Q16531 1140 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 NME9Q86XW9 330 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 OVOS2A0A0J9YW53 1432 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 BCL9O00512 1426 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 OVOS2Q6IE36 1432 aa12.39□□□□□ -0.43
HNRNPU-224ENST00000640056 FCHSD2O94868 740 aa12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 PPP1R9BQ96SB3 815 aa12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 PARP4Q9UKK3 1724 aaKnown RBP12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 COL18A1P39060 1754 aa12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 COL13A1Q5TAT6 717 aaPredicted RBP12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
HNRNPU-224ENST00000640056 HSPA6P17066 643 aa12.37□□□□□ -0.43
HNRNPU-224ENST00000640056 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
HNRNPU-224ENST00000640056 KLHL40Q2TBA0 621 aa12.37□□□□□ -0.43
HNRNPU-224ENST00000640056 TRIM37O94972 964 aa12.37□□□□□ -0.43
HNRNPU-224ENST00000640056 TPM2P07951 284 aa12.37□□□□□ -0.43
HNRNPU-224ENST00000640056 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
HNRNPU-224ENST00000640056 CAMKK2Q96RR4 588 aa12.37□□□□□ -0.43
HNRNPU-224ENST00000640056 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms